Definition | Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence. |
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Accession | NC_009928 |
Length | 273,121 |
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The map label for this gene is 158340300
Identifier: 158340300
GI number: 158340300
Start: 167657
End: 167896
Strand: Reverse
Name: 158340300
Synonym: AM1_C0221
Alternate gene names: NA
Gene position: 167896-167657 (Counterclockwise)
Preceding gene: 158340301
Following gene: 158340299
Centisome position: 61.47
GC content: 44.17
Gene sequence:
>240_bases ATGAGTGCGTACCTGATGGTGAGTCTCCACTCCGATAGGTTTGAATTACCGACAGGATTATCCACGAAACAGCAAGTCCC TCCTGTGATAGAGACGTTTTCACAGCACCGATATTGGCAGACAGGGAAAGGGTGGAAACATCTGCTCAACAACTTGAGGT TAGTGATACAACCGTTGATTCTATTCAATCAGATTCAACCTTGGTTGGAGGTTTTTCCCATTTCCAGATTATCTCTATGA
Upstream 100 bases:
>100_bases AAACTGGGTCGAATATGGTCTCAAGCAAAGCAAGAATGAGTTCTGGGCCGATTTTCGGGTCACGGATTATGCCCAGATTG AACGATGGTGGCAGGTCGTC
Downstream 100 bases:
>100_bases TTTCCACAATTGATTGTGATGATGAATCAACTCCATGGAGCCATACCCAGAGCTGCGCCTGGGGTGAAAACGCTGTTTTT ATCTGCCTAGAGTGATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; FOG Transposase-Like Protein
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MSAYLMVSLHSDRFELPTGLSTKQQVPPVIETFSQHRYWQTGKGWKHLLNNLRLVIQPLILFNQIQPWLEVFPISRLSL
Sequences:
>Translated_79_residues MSAYLMVSLHSDRFELPTGLSTKQQVPPVIETFSQHRYWQTGKGWKHLLNNLRLVIQPLILFNQIQPWLEVFPISRLSL >Mature_78_residues SAYLMVSLHSDRFELPTGLSTKQQVPPVIETFSQHRYWQTGKGWKHLLNNLRLVIQPLILFNQIQPWLEVFPISRLSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9288; Mature: 9157
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAYLMVSLHSDRFELPTGLSTKQQVPPVIETFSQHRYWQTGKGWKHLLNNLRLVIQPLI CCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH LFNQIQPWLEVFPISRLSL HHHHHHHHHHHHCCHHCCC >Mature Secondary Structure SAYLMVSLHSDRFELPTGLSTKQQVPPVIETFSQHRYWQTGKGWKHLLNNLRLVIQPLI CCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH LFNQIQPWLEVFPISRLSL HHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA