Definition | Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence. |
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Accession | NC_009467 |
Length | 203,589 |
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The map label for this gene is 148243796
Identifier: 148243796
GI number: 148243796
Start: 192660
End: 193109
Strand: Reverse
Name: 148243796
Synonym: Acry_3279
Alternate gene names: NA
Gene position: 193109-192660 (Counterclockwise)
Preceding gene: 148243797
Following gene: 148243795
Centisome position: 94.85
GC content: 56.0
Gene sequence:
>450_bases ATGGCGAAGGCTGCGACCGATCTGACGCATCGCCTTCCGACTTCCGATGAAGTCCGAAGCGCGAATGACGCTGCAATAGC ACTTGCGCGAGCAAAATCGCGGGATGGCGCCCTCATTCTTGGCGAAGGATCGAGCGAGCAGCTGCGCCTAGCTCCCGCGA TCAGTGAGTTGCTCGTGGATATCCTTGGGCATATCGCGCGGGGAGAGATGGTAACCTTTGTTCCTGTCGGGTCGATGTTG ACGACGCAACAGGCAGCCGATTTGCTCAACGTCTCGAGGCCATACCTCAGCGGTCTGCTGAAGAACGGGGAGATCCCGTT TGTTCCAATCGGCTCACACAGGCGCGTTAAATTTGAAGATTTGATCGCCTACAAAAATCGGCGTGATAGCAGTCGGGAAA CTGCACTGGATGAATTGGCGCGCTTGGGCCAAGAATTCGATGCCTCATGA
Upstream 100 bases:
>100_bases CATGTCATTTACACTTATTACACCTTTTTCGTTTATTTCACTTGTTGGCGAGGGGTTATTGCCCTAGCTAAGAGCCAGAT CAAAAAATGAGGAGGGGTTG
Downstream 100 bases:
>100_bases AGCACATTGCGGACCGCTTTGTTGTCGTATTGGACGCAAATGTCCTGTATCCATTCAGGATGCGGGACATTCTTCTGTGC TTCTATCATGCTGGCTTGTT
Product: DNA binding domain-containing protein
Products: NA
Alternate protein names: Excisionase Domain Protein; Excisionase Protein; Excisionase Domain-Containing Protein; Transcriptional Regulator MerR Family; Type IIA poisomerase Subunit A; Excisionase/Xis; Plasmid-Related Excisionase; Type IIA poisomerase; Xin-Antitoxin System Antitoxin Component MerR Family
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MAKAATDLTHRLPTSDEVRSANDAAIALARAKSRDGALILGEGSSEQLRLAPAISELLVDILGHIARGEMVTFVPVGSML TTQQAADLLNVSRPYLSGLLKNGEIPFVPIGSHRRVKFEDLIAYKNRRDSSRETALDELARLGQEFDAS
Sequences:
>Translated_149_residues MAKAATDLTHRLPTSDEVRSANDAAIALARAKSRDGALILGEGSSEQLRLAPAISELLVDILGHIARGEMVTFVPVGSML TTQQAADLLNVSRPYLSGLLKNGEIPFVPIGSHRRVKFEDLIAYKNRRDSSRETALDELARLGQEFDAS >Mature_148_residues AKAATDLTHRLPTSDEVRSANDAAIALARAKSRDGALILGEGSSEQLRLAPAISELLVDILGHIARGEMVTFVPVGSMLT TQQAADLLNVSRPYLSGLLKNGEIPFVPIGSHRRVKFEDLIAYKNRRDSSRETALDELARLGQEFDAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16126; Mature: 15994
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAATDLTHRLPTSDEVRSANDAAIALARAKSRDGALILGEGSSEQLRLAPAISELLVD CCCCHHHHHHCCCCCHHHCCCCCHHHHEECCCCCCCEEEEECCCCCCEEHHHHHHHHHHH ILGHIARGEMVTFVPVGSMLTTQQAADLLNVSRPYLSGLLKNGEIPFVPIGSHRRVKFED HHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCCHHHH LIAYKNRRDSSRETALDELARLGQEFDAS HHHHHCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AKAATDLTHRLPTSDEVRSANDAAIALARAKSRDGALILGEGSSEQLRLAPAISELLVD CCCHHHHHHCCCCCHHHCCCCCHHHHEECCCCCCCEEEEECCCCCCEEHHHHHHHHHHH ILGHIARGEMVTFVPVGSMLTTQQAADLLNVSRPYLSGLLKNGEIPFVPIGSHRRVKFED HHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCCCCHHHH LIAYKNRRDSSRETALDELARLGQEFDAS HHHHHCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA