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The map label for this gene is yrrC [H]

Identifier: 148243790

GI number: 148243790

Start: 182886

End: 185081

Strand: Direct

Name: yrrC [H]

Synonym: Acry_3273

Alternate gene names: 148243790

Gene position: 182886-185081 (Clockwise)

Preceding gene: 148243789

Following gene: 148243798

Centisome position: 89.83

GC content: 65.85

Gene sequence:

>2196_bases
ATGGCGAGCCGCCCCGCAGACACTGCCCCTGCCCAAGCACCGGATCGCGAGGTCCTCGCCGGCCTGGTTGAGCGGGTGAC
GTTCCACAATGCCGAGAACGGTTTCTGCGTGTTGCGGGTGAAAGCCCGGGGGCACCGTGATCTCGTTACAGTCATCGGGC
ATGCCGCGACGATCAGCGCCGGAGAGTGGCTGACCGCGAGCGGTGAATGGGTAAACGACCGGGTTCATGGCCAGCAATTC
CGGTCGAAGTTCCTGCGGACATCGGCGCCGACCACGGCCGAGGGGATCGAGCGCTATCTGGCCTCTGGCATGATCCGCGG
CATTGGGCCGGTGTATGCGAAGAAACTGATCCGGGCCTTCGGTGACACGGTGTTCGACGTGATCGAGGCCAAGCCCGAAC
GCCTGCGCGAGGTGCCGGGTATCGGTGCGGTGCGGGCCGGGCGGATCGTCAACGCCTGGGCCGAGCAGAAGGTTGTGCGG
GAGATCATGGTGTTCCTGCATAGCCATGGGGTGAGCACGGCCCGCGCCGTGTGGATCTTCAAGACCTACGGCGCTGACGC
CGTGCAGGTGATGAGCGAGAACCCGTATCGTCTGGCGCGGGATATCAGGGGGATCGGTTTCCGGACAGCGGATGCGATCG
CGGAGAAGCTCGGCATCGCCAGGGACGCGATGATCCGGGTGCGTGCCGGCATCGGACATGCTCTGGCGACGGCAATGGAT
GATGGCCATTGTGGCTTGCCGGCCGGCGAACTGGTCTCGCTCGCCGAAACGCTGCTCGAGGTGCCGGCGCCGCTGATCGG
GACGGCACTCGACCTCGAACTGGCAGAGGGCACGGTGATCGCCGATCAGGTGGCGGGGACTGACTGTGTGTTCCTGGCCG
GCTTGTATCGGGCGGAACAGGGTATCGCCGAGCGGCTGCGAATTATTGCCTCCGGTGCAACATCCTGGCCATCGATCGAT
GCCGACAAGGCGATCGGCTGGGTGGAAAGCCATCTCGGCATGAATCTGGCGGCGAGCCAGAGTGAGGCGGTGCGGCTGGC
GCTGACCGCAAAGCTGCTGGTGATCACCGGCGGACCGGGTGTCGGCAAGACCACGATCGTCCGGGCGATCCTGCGGATCC
TCGCTGCAAAATCCGTCCGCATTCTGCTCGCCGCGCCGACCGGCCGGGCAGCCAAGCGTCTTGCCGAGACGACGGGGTTC
GAGGCGAAGACGATCCACCGCCTGCTCGAGGTAGATCCTGCGAGCGGCGGCTTCCGCCGCGGCGTCGACCATTCGCTGGA
ATGCGACCTGCTGGTGATCGACGAGACCTCGATGGTGGACGTGCCGTTGATGCATGCGCTGACCAGGGCGATCCCCGACG
AGGCAGCGCTGCTGGTGGTGGGAGATGTCGACCAGCTTCCCTCGGTGGGACCGGGGCAGGTGCTCGCGGACCTGATCGGG
TCTGGCGCGGTACCGGTGGTGCGGCTGACGGAGATCTTCCGCCAGGCAGCGGCAAGCCGGATCATAACTGTGGCGCATAG
CGTCAATCGCGGGGAGATCCCCGATCTCGGCCGCGCCGATCCCGAGAGCGATTTCCATTTCGTGGCGGCCGACGAGCCGG
AGACGGCGGTCGAGCGCATCGTGGAGTTGGTGAAGACGCGGATTCCGCGCCGGTTTAGACTGGATCCGATCCGCGATATC
CAGGTGCTCTGTCCTATGGCCCGGGGTGGGGTCGGCGCGCGGTCACTCAACATCACCCTGCAGGCGGCGCTGAACGGCGC
GGCGGAACCGCGGGTCGAGCGATTCGGCTGGACCTACGCCCCCGGCGACAAAGTCATGCAGATCGAGAACGACTACGACC
GGGAGGTCTACAACGGCGATATCGGCTTTATTGCTCGGGTCGATGCGGAGGCTGGTGAGATCGCTGTCGGCTTCGATGGA
CGGGAGGTGGTCTACGGTCTCGGCGAGCTGGACGCGCTTGTGCCGGCCTATGCGGCGACGATCCACAAGTCCCAGGGCTC
TGAATACCCAGCCGTCGTCATTCCGGTGCTGACCCAGCACTACGTGATGCTGCAGCGGAACCTGCTCTACACCGGCATCA
CGCGCGGCCGGCGGCTAGTCGTTCTGGTCGGCAGTCGGCGTGCTGTCGCCATCGCCGTGCGGAATATCTCGGGGCGGCGC
CGATGGTCGAAGCTTAGGGAATGGCTGGGGCAGTAG

Upstream 100 bases:

>100_bases
GGCATCGCCAGGCGTCTAAAACATCAGTGGGGTCCGAGGCCCTGGAGGTGACGAGGGCTGCGGACTTGACGCCGCGCCAC
CGCCGAAGTGCCATACGCTA

Downstream 100 bases:

>100_bases
GCAGGATCTGCTCCCGAAGTTACGAGGCCGCCCGAAATGTCTCGCATGGTCGTGATCGATCACAACCTTGTAGCTGCACG
CGATGCCGATCACACGTACG

Product: RecD/TraA family helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 731; Mature: 730

Protein sequence:

>731_residues
MASRPADTAPAQAPDREVLAGLVERVTFHNAENGFCVLRVKARGHRDLVTVIGHAATISAGEWLTASGEWVNDRVHGQQF
RSKFLRTSAPTTAEGIERYLASGMIRGIGPVYAKKLIRAFGDTVFDVIEAKPERLREVPGIGAVRAGRIVNAWAEQKVVR
EIMVFLHSHGVSTARAVWIFKTYGADAVQVMSENPYRLARDIRGIGFRTADAIAEKLGIARDAMIRVRAGIGHALATAMD
DGHCGLPAGELVSLAETLLEVPAPLIGTALDLELAEGTVIADQVAGTDCVFLAGLYRAEQGIAERLRIIASGATSWPSID
ADKAIGWVESHLGMNLAASQSEAVRLALTAKLLVITGGPGVGKTTIVRAILRILAAKSVRILLAAPTGRAAKRLAETTGF
EAKTIHRLLEVDPASGGFRRGVDHSLECDLLVIDETSMVDVPLMHALTRAIPDEAALLVVGDVDQLPSVGPGQVLADLIG
SGAVPVVRLTEIFRQAAASRIITVAHSVNRGEIPDLGRADPESDFHFVAADEPETAVERIVELVKTRIPRRFRLDPIRDI
QVLCPMARGGVGARSLNITLQAALNGAAEPRVERFGWTYAPGDKVMQIENDYDREVYNGDIGFIARVDAEAGEIAVGFDG
REVVYGLGELDALVPAYAATIHKSQGSEYPAVVIPVLTQHYVMLQRNLLYTGITRGRRLVVLVGSRRAVAIAVRNISGRR
RWSKLREWLGQ

Sequences:

>Translated_731_residues
MASRPADTAPAQAPDREVLAGLVERVTFHNAENGFCVLRVKARGHRDLVTVIGHAATISAGEWLTASGEWVNDRVHGQQF
RSKFLRTSAPTTAEGIERYLASGMIRGIGPVYAKKLIRAFGDTVFDVIEAKPERLREVPGIGAVRAGRIVNAWAEQKVVR
EIMVFLHSHGVSTARAVWIFKTYGADAVQVMSENPYRLARDIRGIGFRTADAIAEKLGIARDAMIRVRAGIGHALATAMD
DGHCGLPAGELVSLAETLLEVPAPLIGTALDLELAEGTVIADQVAGTDCVFLAGLYRAEQGIAERLRIIASGATSWPSID
ADKAIGWVESHLGMNLAASQSEAVRLALTAKLLVITGGPGVGKTTIVRAILRILAAKSVRILLAAPTGRAAKRLAETTGF
EAKTIHRLLEVDPASGGFRRGVDHSLECDLLVIDETSMVDVPLMHALTRAIPDEAALLVVGDVDQLPSVGPGQVLADLIG
SGAVPVVRLTEIFRQAAASRIITVAHSVNRGEIPDLGRADPESDFHFVAADEPETAVERIVELVKTRIPRRFRLDPIRDI
QVLCPMARGGVGARSLNITLQAALNGAAEPRVERFGWTYAPGDKVMQIENDYDREVYNGDIGFIARVDAEAGEIAVGFDG
REVVYGLGELDALVPAYAATIHKSQGSEYPAVVIPVLTQHYVMLQRNLLYTGITRGRRLVVLVGSRRAVAIAVRNISGRR
RWSKLREWLGQ
>Mature_730_residues
ASRPADTAPAQAPDREVLAGLVERVTFHNAENGFCVLRVKARGHRDLVTVIGHAATISAGEWLTASGEWVNDRVHGQQFR
SKFLRTSAPTTAEGIERYLASGMIRGIGPVYAKKLIRAFGDTVFDVIEAKPERLREVPGIGAVRAGRIVNAWAEQKVVRE
IMVFLHSHGVSTARAVWIFKTYGADAVQVMSENPYRLARDIRGIGFRTADAIAEKLGIARDAMIRVRAGIGHALATAMDD
GHCGLPAGELVSLAETLLEVPAPLIGTALDLELAEGTVIADQVAGTDCVFLAGLYRAEQGIAERLRIIASGATSWPSIDA
DKAIGWVESHLGMNLAASQSEAVRLALTAKLLVITGGPGVGKTTIVRAILRILAAKSVRILLAAPTGRAAKRLAETTGFE
AKTIHRLLEVDPASGGFRRGVDHSLECDLLVIDETSMVDVPLMHALTRAIPDEAALLVVGDVDQLPSVGPGQVLADLIGS
GAVPVVRLTEIFRQAAASRIITVAHSVNRGEIPDLGRADPESDFHFVAADEPETAVERIVELVKTRIPRRFRLDPIRDIQ
VLCPMARGGVGARSLNITLQAALNGAAEPRVERFGWTYAPGDKVMQIENDYDREVYNGDIGFIARVDAEAGEIAVGFDGR
EVVYGLGELDALVPAYAATIHKSQGSEYPAVVIPVLTQHYVMLQRNLLYTGITRGRRLVVLVGSRRAVAIAVRNISGRRR
WSKLREWLGQ

Specific function: Exhibits Several Catalytic Activities, Including ATP-Dependent Exonuclease, ATP-Stimulated Endonuclease, ATP-Dependent Unwinding And DNA-Dependent ATPase Activities. Strand Cleavage Occurs 5' To 3' During The Unwinding Of Duplex DNA At Chi Sequences, Whi

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789182, Length=447, Percent_Identity=28.6353467561521, Blast_Score=130, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006345 [H]

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 78774; Mature: 78642

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS00513 ADENYLOSUCCIN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRPADTAPAQAPDREVLAGLVERVTFHNAENGFCVLRVKARGHRDLVTVIGHAATISA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHCCHHEECC
GEWLTASGEWVNDRVHGQQFRSKFLRTSAPTTAEGIERYLASGMIRGIGPVYAKKLIRAF
CCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GDTVFDVIEAKPERLREVPGIGAVRAGRIVNAWAEQKVVREIMVFLHSHGVSTARAVWIF
HHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
KTYGADAVQVMSENPYRLARDIRGIGFRTADAIAEKLGIARDAMIRVRAGIGHALATAMD
EECCCCHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHCC
DGHCGLPAGELVSLAETLLEVPAPLIGTALDLELAEGTVIADQVAGTDCVFLAGLYRAEQ
CCCCCCCHHHHHHHHHHHHHCCCCHHCCEEEEEECCCEEEEHHHCCCCHHHHHHHHHHHH
GIAERLRIIASGATSWPSIDADKAIGWVESHLGMNLAASQSEAVRLALTAKLLVITGGPG
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHEEEEEEEEEEEEECCCC
VGKTTIVRAILRILAAKSVRILLAAPTGRAAKRLAETTGFEAKTIHRLLEVDPASGGFRR
CCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHC
GVDHSLECDLLVIDETSMVDVPLMHALTRAIPDEAALLVVGDVDQLPSVGPGQVLADLIG
CCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECHHHCCCCCHHHHHHHHHC
SGAVPVVRLTEIFRQAAASRIITVAHSVNRGEIPDLGRADPESDFHFVAADEPETAVERI
CCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHH
VELVKTRIPRRFRLDPIRDIQVLCPMARGGVGARSLNITLQAALNGAAEPRVERFGWTYA
HHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCEEC
PGDKVMQIENDYDREVYNGDIGFIARVDAEAGEIAVGFDGREVVYGLGELDALVPAYAAT
CCCCEEEECCCCCCHHCCCCEEEEEEECCCCCCEEECCCCHHEEEECHHHHHHHHHHHHH
IHKSQGSEYPAVVIPVLTQHYVMLQRNLLYTGITRGRRLVVLVGSRRAVAIAVRNISGRR
HHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCHH
RWSKLREWLGQ
HHHHHHHHHCC
>Mature Secondary Structure 
ASRPADTAPAQAPDREVLAGLVERVTFHNAENGFCVLRVKARGHRDLVTVIGHAATISA
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHCCHHEECC
GEWLTASGEWVNDRVHGQQFRSKFLRTSAPTTAEGIERYLASGMIRGIGPVYAKKLIRAF
CCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
GDTVFDVIEAKPERLREVPGIGAVRAGRIVNAWAEQKVVREIMVFLHSHGVSTARAVWIF
HHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
KTYGADAVQVMSENPYRLARDIRGIGFRTADAIAEKLGIARDAMIRVRAGIGHALATAMD
EECCCCHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHCC
DGHCGLPAGELVSLAETLLEVPAPLIGTALDLELAEGTVIADQVAGTDCVFLAGLYRAEQ
CCCCCCCHHHHHHHHHHHHHCCCCHHCCEEEEEECCCEEEEHHHCCCCHHHHHHHHHHHH
GIAERLRIIASGATSWPSIDADKAIGWVESHLGMNLAASQSEAVRLALTAKLLVITGGPG
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHEEEEEEEEEEEEECCCC
VGKTTIVRAILRILAAKSVRILLAAPTGRAAKRLAETTGFEAKTIHRLLEVDPASGGFRR
CCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHC
GVDHSLECDLLVIDETSMVDVPLMHALTRAIPDEAALLVVGDVDQLPSVGPGQVLADLIG
CCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECHHHCCCCCHHHHHHHHHC
SGAVPVVRLTEIFRQAAASRIITVAHSVNRGEIPDLGRADPESDFHFVAADEPETAVERI
CCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHH
VELVKTRIPRRFRLDPIRDIQVLCPMARGGVGARSLNITLQAALNGAAEPRVERFGWTYA
HHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHCCCEEC
PGDKVMQIENDYDREVYNGDIGFIARVDAEAGEIAVGFDGREVVYGLGELDALVPAYAAT
CCCCEEEECCCCCCHHCCCCEEEEEEECCCCCCEEECCCCHHEEEECHHHHHHHHHHHHH
IHKSQGSEYPAVVIPVLTQHYVMLQRNLLYTGITRGRRLVVLVGSRRAVAIAVRNISGRR
HHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCHH
RWSKLREWLGQ
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: DNA-dependent ATPase activity; Phosphoric ester hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]