Click here to switch to the map view.

The map label for this gene is ybfL [H]

Identifier: 148243712

GI number: 148243712

Start: 96950

End: 97573

Strand: Direct

Name: ybfL [H]

Synonym: Acry_3188

Alternate gene names: 148243712

Gene position: 96950-97573 (Clockwise)

Preceding gene: 148243708

Following gene: 148243714

Centisome position: 47.62

GC content: 65.22

Gene sequence:

>624_bases
ATGGCCGCGTTCAGCTCGTTGCTCGATATCCTGGCAGAGGTTCCCGATCCGCGGCGCGCGGAAGGCAAGCTCTACAAGCT
GCCGCATGTCCTGCTGTTCTCGATCCTGGCGATCATCAGCGGCAGCAACTCGTATCGCGGCATCGTCACCTTCATCGACG
TCCATCGCCGCCGGTTGAACCGCAGCTTCGGCCTGAAATGGCGCCGGGCGCCCTCGCACACGGCGATCCGCTACATCCTC
CAGGGGCTCGATCCGGGCGCGGTGGAGGCCGCGTTCCGACGCCACGCGGCACTGCTGCAGGCGGCCAGGACCAAGCCCGG
CACGGCCAGCATTGCGCTCGACGGCAAGACCCTGCGCGGCAGTTTCGACAGGTTCCATGACCGCACCGCGGCTCATGTGC
TCAGCGCCTTCGCCACCGACACCAAGCTGGTGCTCGCTCATGTCGAGATCGGCGAGAAATCCAGCGAGATCCCCGCCGCC
CAGGCGCTGCTCGCCGAACTGGGCATCGCCAAGGACACACTCGTCACCCTGGATGCCCTGCACTGCCAAAAAAAGCCTTC
AACGTCGCCCAGGCGGGCAACATCAGCCTCATCGTCCAGGTCAAGGACAATCAACCGACGCTGA

Upstream 100 bases:

>100_bases
GACTTTCTGGGTGGGGGCGAACTGACTTTCTGGGGAATATGGGGATTCCCGACCGGCGGGATTTGGGATTCTTGGGAAGG
CAACCGATACGGAGGTTGTC

Downstream 100 bases:

>100_bases
AGCAGGCGATCCACCATATCGCCACATCGAGCGCCCCATACGACGTCTTCCGGACCCGCGACCGCGGCCGCAATCGTGAC
GAAACCCGCACCGTCTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: H repeat-associated protein in rhsC-phrB intergenic region; ORF-H2 [H]

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAAFSSLLDILAEVPDPRRAEGKLYKLPHVLLFSILAIISGSNSYRGIVTFIDVHRRRLNRSFGLKWRRAPSHTAIRYIL
QGLDPGAVEAAFRRHAALLQAARTKPGTASIALDGKTLRGSFDRFHDRTAAHVLSAFATDTKLVLAHVEIGEKSSEIPAA
QALLAELGIAKDTLVTLDALHCQKKPSTSPRRATSASSSRSRTINRR

Sequences:

>Translated_207_residues
MAAFSSLLDILAEVPDPRRAEGKLYKLPHVLLFSILAIISGSNSYRGIVTFIDVHRRRLNRSFGLKWRRAPSHTAIRYIL
QGLDPGAVEAAFRRHAALLQAARTKPGTASIALDGKTLRGSFDRFHDRTAAHVLSAFATDTKLVLAHVEIGEKSSEIPAA
QALLAELGIAKDTLVTLDALHCQKKPSTSPRRATSASSSRSRTINRR
>Mature_206_residues
AAFSSLLDILAEVPDPRRAEGKLYKLPHVLLFSILAIISGSNSYRGIVTFIDVHRRRLNRSFGLKWRRAPSHTAIRYILQ
GLDPGAVEAAFRRHAALLQAARTKPGTASIALDGKTLRGSFDRFHDRTAAHVLSAFATDTKLVLAHVEIGEKSSEIPAAQ
ALLAELGIAKDTLVTLDALHCQKKPSTSPRRATSASSSRSRTINRR

Specific function: Unknown

COG id: COG5433

COG function: function code L; Transposase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1787733, Length=171, Percent_Identity=35.0877192982456, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789896, Length=178, Percent_Identity=33.7078651685393, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1786924, Length=178, Percent_Identity=32.0224719101124, Blast_Score=84, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 22641; Mature: 22510

Theoretical pI: Translated: 11.47; Mature: 11.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAFSSLLDILAEVPDPRRAEGKLYKLPHVLLFSILAIISGSNSYRGIVTFIDVHRRRLN
CHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RSFGLKWRRAPSHTAIRYILQGLDPGAVEAAFRRHAALLQAARTKPGTASIALDGKTLRG
HHHCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHC
SFDRFHDRTAAHVLSAFATDTKLVLAHVEIGEKSSEIPAAQALLAELGIAKDTLVTLDAL
HHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH
HCQKKPSTSPRRATSASSSRSRTINRR
HCCCCCCCCCCHHHCCCCHHCCCCCCC
>Mature Secondary Structure 
AAFSSLLDILAEVPDPRRAEGKLYKLPHVLLFSILAIISGSNSYRGIVTFIDVHRRRLN
HHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RSFGLKWRRAPSHTAIRYILQGLDPGAVEAAFRRHAALLQAARTKPGTASIALDGKTLRG
HHHCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHC
SFDRFHDRTAAHVLSAFATDTKLVLAHVEIGEKSSEIPAAQALLAELGIAKDTLVTLDAL
HHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH
HCQKKPSTSPRRATSASSSRSRTINRR
HCCCCCCCCCCHHHCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8387990; 8905232; 9278503 [H]