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The map label for this gene is yjjM [H]

Identifier: 148243696

GI number: 148243696

Start: 81170

End: 82048

Strand: Reverse

Name: yjjM [H]

Synonym: Acry_3171

Alternate gene names: 148243696

Gene position: 82048-81170 (Counterclockwise)

Preceding gene: 148243698

Following gene: 148243693

Centisome position: 40.3

GC content: 63.94

Gene sequence:

>879_bases
ATGGCAAAGCCGAACACGTTGCTGAAGCGAACGAATAACGCCCTGCTCGACTACATCAGGGGCCTTTCGGCAGAGCCAGG
CGCATTCGGGTCGGAGAGCGTGCTTGCCCGTCAGTTCGGGGTGAGCCGCACTACGGTGCGCGCCGCCATCGAAACCATGA
TCGCGAGCGGGATTCTCGAGCGCGGGCCGGCCCGCCCCCGCGTCATGCGCCGCCCCAAACGCACGGATTATTACACCGAG
TCGGAAACCGACGGGCCGCAAGAGCATATCGAACGCGTCTTCATGCAGCGCGTCCTCCTTGGCGACTGGCGGCCCGGGCA
CACCTTCTCCGAAGCCGAACTGGCGCGCGACAGCAATGCCAGCACCGTTTCCGTCCGCGAATTCCTGATCGGCTTCTCCC
GCTTCGGGCTCATCGCCAAGCAGCCGCGCGGCGGCTGGATCCTGCGGGAATTCCATGACGGTTTCGCCGCCGAGGTGGCC
GACATGCGCGAACTGATCGAAATGGCCGCCCTCGCGCGCATGCCCCGCGCCGGCAGCGCCGCCCTCACCGAGGCGGCGGA
TGCGATGATCGCCCGCCACCGCGACATCGAGGCGGCATCTGTGGACGCCCCGCGGAAAGCAAGCGCAAATTTGAGGGTGC
ACAGGTGTCGGATGCTGCCATCTGTCCGGCCTCTGGGTGCAGAGATGTTCTGCGGGCCTGTATGGGAGTTCGCGGATCGG
ATCCAAAACACTACAGCGTGCTCGCGCACATTGGTAACAACTGGTTTTCCGACCCCGTCTCGCCGACGGTTGTGTCATAC
TCTCCTTCGATCGCCTACCTTCTCCGCCAGCCTCAGTAGCTTGGCAGTTTATACTGCTGCAGCTACCGAAGCTCGATAA

Upstream 100 bases:

>100_bases
CTTTTCTGTCATACACCCGTGAAAAACATTTCCCTTTCCTGGCGGTTCTCGACATGTGGCCGCCTTTTTCTTGTCCCCTG
AACCGCGCCGAGCAGAAGGA

Downstream 100 bases:

>100_bases
TCCTCTTTCTTTGTGAGCACGGCCCACACAATGCGTGCGGTCTTGTTGGCCTGTGCAACCGTGACCAACATTCGCGGCTT
GCGTGTCAGCATCGAAGCAA

Product: regulatory protein GntR, HTH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MAKPNTLLKRTNNALLDYIRGLSAEPGAFGSESVLARQFGVSRTTVRAAIETMIASGILERGPARPRVMRRPKRTDYYTE
SETDGPQEHIERVFMQRVLLGDWRPGHTFSEAELARDSNASTVSVREFLIGFSRFGLIAKQPRGGWILREFHDGFAAEVA
DMRELIEMAALARMPRAGSAALTEAADAMIARHRDIEAASVDAPRKASANLRVHRCRMLPSVRPLGAEMFCGPVWEFADR
IQNTTACSRTLVTTGFPTPSRRRLCHTLLRSPTFSASLSSLAVYTAAATEAR

Sequences:

>Translated_292_residues
MAKPNTLLKRTNNALLDYIRGLSAEPGAFGSESVLARQFGVSRTTVRAAIETMIASGILERGPARPRVMRRPKRTDYYTE
SETDGPQEHIERVFMQRVLLGDWRPGHTFSEAELARDSNASTVSVREFLIGFSRFGLIAKQPRGGWILREFHDGFAAEVA
DMRELIEMAALARMPRAGSAALTEAADAMIARHRDIEAASVDAPRKASANLRVHRCRMLPSVRPLGAEMFCGPVWEFADR
IQNTTACSRTLVTTGFPTPSRRRLCHTLLRSPTFSASLSSLAVYTAAATEAR
>Mature_291_residues
AKPNTLLKRTNNALLDYIRGLSAEPGAFGSESVLARQFGVSRTTVRAAIETMIASGILERGPARPRVMRRPKRTDYYTES
ETDGPQEHIERVFMQRVLLGDWRPGHTFSEAELARDSNASTVSVREFLIGFSRFGLIAKQPRGGWILREFHDGFAAEVAD
MRELIEMAALARMPRAGSAALTEAADAMIARHRDIEAASVDAPRKASANLRVHRCRMLPSVRPLGAEMFCGPVWEFADRI
QNTTACSRTLVTTGFPTPSRRRLCHTLLRSPTFSASLSSLAVYTAAATEAR

Specific function: May be a positive transcriptional regulator for yjjM and/or yjjN. Is essential for growth on L-galactonate as the sole carbon source [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48995005, Length=188, Percent_Identity=31.3829787234043, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 32264; Mature: 32133

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKPNTLLKRTNNALLDYIRGLSAEPGAFGSESVLARQFGVSRTTVRAAIETMIASGILE
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RGPARPRVMRRPKRTDYYTESETDGPQEHIERVFMQRVLLGDWRPGHTFSEAELARDSNA
CCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCC
STVSVREFLIGFSRFGLIAKQPRGGWILREFHDGFAAEVADMRELIEMAALARMPRAGSA
CHHHHHHHHHHHHHHCCEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCH
ALTEAADAMIARHRDIEAASVDAPRKASANLRVHRCRMLPSVRPLGAEMFCGPVWEFADR
HHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
IQNTTACSRTLVTTGFPTPSRRRLCHTLLRSPTFSASLSSLAVYTAAATEAR
HHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKPNTLLKRTNNALLDYIRGLSAEPGAFGSESVLARQFGVSRTTVRAAIETMIASGILE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RGPARPRVMRRPKRTDYYTESETDGPQEHIERVFMQRVLLGDWRPGHTFSEAELARDSNA
CCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCC
STVSVREFLIGFSRFGLIAKQPRGGWILREFHDGFAAEVADMRELIEMAALARMPRAGSA
CHHHHHHHHHHHHHHCCEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCH
ALTEAADAMIARHRDIEAASVDAPRKASANLRVHRCRMLPSVRPLGAEMFCGPVWEFADR
HHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
IQNTTACSRTLVTTGFPTPSRRRLCHTLLRSPTFSASLSSLAVYTAAATEAR
HHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]