Definition | Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence. |
---|---|
Accession | NC_009467 |
Length | 203,589 |
Click here to switch to the map view.
The map label for this gene is 148243669
Identifier: 148243669
GI number: 148243669
Start: 44516
End: 45322
Strand: Reverse
Name: 148243669
Synonym: Acry_3140
Alternate gene names: NA
Gene position: 45322-44516 (Counterclockwise)
Preceding gene: 148243670
Following gene: 148243667
Centisome position: 22.26
GC content: 65.3
Gene sequence:
>807_bases ATGTGGACGCCAACCACCCGTGCGCAGCATAGCCGCACCGGACTGCGCTATGGAAGTGACGTGACCGACGCGGAGTGGTT GCTCCTGTCGCCGTTCCTGCCCGCGCCGAGCCGATGCGGCCGGCATCGGAAGTGGGAGATGCGCGAGATTGTCAACGCGA TCTTCTACGTCTTGCGTGGTGGGATTGCCTGGAGCCTGCTGCCGAAGGACTTTCCGCCGTGGCCCACGGCGTATCGCTGG TTTGCCCGGTTCCGCGACGACGGCACCTGGGAGCGGATCAACCACCATCTGGTGATGCGCGACCGCGAGAGGGTGGGTCG CGAGGCCAGTCCGACGGCGGCCGTGATCGACAGTCAAAGCGTCAAGACGACAGAGAGTGGCGGCACGCGGGGGTACGATG CTGGAAAGAAGATCAAGGGGCGCAAGCGGCACGCCATGGTCGATACCGACGGCCGGGCGCTCAAGCTGCAGGCCCATTCG GCGGCCATCCAGGATCGTGACGGGGCTGGACCGCTGCTCCGTGCGTCGCGTGCGAGTTGGCCGTTTGTGGCGCTGGGCTA CGCAGATGGCGGCTATGCCGGGCCCCGTGTCGCCGACGCCAGCCCGATCCGCATCGAGGTGGTGCGCAAGGCCAACAACC AGGTCGGCTTCGCCGTCATCGCTCGACGCTGGGTCGTCGAACGGTTCTTCGCCTGGATCAATCGCAACAGGCGGCTGGCA AAGGATTTCGAAGCCACTATCGAGAGTGTCGAGGCCTTCCTCTACGCCGCGTCCAGCATTCTCCTGCTACGCAGATTGGC TCGTTAA
Upstream 100 bases:
>100_bases AGGCCATTTCGGAATGGGGTCGGAACGTTTTTGATGAGGGGTTGGATGGTTGGGCCAAATGTGATTCCGGGCAGGTGTTC GAAGCCTTGCCGGAGACACC
Downstream 100 bases:
>100_bases TAATCCGATTCGAAATGGACTCTAAAGGAGTTCAAACGCATCGCCCTGCGCGCCTGCAAAACAGACCAGAGCTTCCAGGC AATGATCCACCTCGCCGCAG
Product: transposase, IS4 family protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; Transposase IS5 Family Protein; IS5 Family Transposase; Transposase And Inactivated Derivatives-Like Protein; Transposase Of; IS4 Insertion Sequence Transposase Protein; Transposase Is4 Family Protein; Transposase-Like Protein; Transposase Fragment; Transposase And Inactivated Derivatives-Like; Transposase Protein; ISXo3 Transposase ORF B; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Transposase IS5 Family Protein-Like Protein; Family Transposase; Transposase IS4 Family; Transposon; IS4 Family Insertion Sequence Transposase Protein; Transposase Is4 Family; Insertion Sequence Transposase Protein; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Isxo3 Transposase Protein; Insertion Sequence Transposase Truncated Protein; Transposase Is4-Like Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MWTPTTRAQHSRTGLRYGSDVTDAEWLLLSPFLPAPSRCGRHRKWEMREIVNAIFYVLRGGIAWSLLPKDFPPWPTAYRW FARFRDDGTWERINHHLVMRDRERVGREASPTAAVIDSQSVKTTESGGTRGYDAGKKIKGRKRHAMVDTDGRALKLQAHS AAIQDRDGAGPLLRASRASWPFVALGYADGGYAGPRVADASPIRIEVVRKANNQVGFAVIARRWVVERFFAWINRNRRLA KDFEATIESVEAFLYAASSILLLRRLAR
Sequences:
>Translated_268_residues MWTPTTRAQHSRTGLRYGSDVTDAEWLLLSPFLPAPSRCGRHRKWEMREIVNAIFYVLRGGIAWSLLPKDFPPWPTAYRW FARFRDDGTWERINHHLVMRDRERVGREASPTAAVIDSQSVKTTESGGTRGYDAGKKIKGRKRHAMVDTDGRALKLQAHS AAIQDRDGAGPLLRASRASWPFVALGYADGGYAGPRVADASPIRIEVVRKANNQVGFAVIARRWVVERFFAWINRNRRLA KDFEATIESVEAFLYAASSILLLRRLAR >Mature_268_residues MWTPTTRAQHSRTGLRYGSDVTDAEWLLLSPFLPAPSRCGRHRKWEMREIVNAIFYVLRGGIAWSLLPKDFPPWPTAYRW FARFRDDGTWERINHHLVMRDRERVGREASPTAAVIDSQSVKTTESGGTRGYDAGKKIKGRKRHAMVDTDGRALKLQAHS AAIQDRDGAGPLLRASRASWPFVALGYADGGYAGPRVADASPIRIEVVRKANNQVGFAVIARRWVVERFFAWINRNRRLA KDFEATIESVEAFLYAASSILLLRRLAR
Specific function: Unknown
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30389; Mature: 30389
Theoretical pI: Translated: 11.27; Mature: 11.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTPTTRAQHSRTGLRYGSDVTDAEWLLLSPFLPAPSRCGRHRKWEMREIVNAIFYVLRG CCCCCCCCHHHHCCCCCCCCCCCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHC GIAWSLLPKDFPPWPTAYRWFARFRDDGTWERINHHLVMRDRERVGREASPTAAVIDSQS CCEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHCCHHEEECHHHCCCCCCCCEEEECCCC VKTTESGGTRGYDAGKKIKGRKRHAMVDTDGRALKLQAHSAAIQDRDGAGPLLRASRASW CEECCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEHHHHHHCCCCCCCCHHHCCCCCC PFVALGYADGGYAGPRVADASPIRIEVVRKANNQVGFAVIARRWVVERFFAWINRNRRLA CEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH KDFEATIESVEAFLYAASSILLLRRLAR HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MWTPTTRAQHSRTGLRYGSDVTDAEWLLLSPFLPAPSRCGRHRKWEMREIVNAIFYVLRG CCCCCCCCHHHHCCCCCCCCCCCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHHHHC GIAWSLLPKDFPPWPTAYRWFARFRDDGTWERINHHLVMRDRERVGREASPTAAVIDSQS CCEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHCCHHEEECHHHCCCCCCCCEEEECCCC VKTTESGGTRGYDAGKKIKGRKRHAMVDTDGRALKLQAHSAAIQDRDGAGPLLRASRASW CEECCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEHHHHHHCCCCCCCCHHHCCCCCC PFVALGYADGGYAGPRVADASPIRIEVVRKANNQVGFAVIARRWVVERFFAWINRNRRLA CEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH KDFEATIESVEAFLYAASSILLLRRLAR HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA