Definition | Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence. |
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Accession | NC_009467 |
Length | 203,589 |
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The map label for this gene is 148243664
Identifier: 148243664
GI number: 148243664
Start: 32235
End: 33797
Strand: Reverse
Name: 148243664
Synonym: Acry_3135
Alternate gene names: NA
Gene position: 33797-32235 (Counterclockwise)
Preceding gene: 148243665
Following gene: 148243663
Centisome position: 16.6
GC content: 58.8
Gene sequence:
>1563_bases ATGACGCAGCATTACGACGTCATCATCATCGGAAGCGGCCCTGGTGGCGCATCTGTCGCGTATCGCCTCGCGCCAACCGG CAAACGCATCTTGCTGATTGAGCGTGGCGATTATCTGCCGCGTTCGCGTGCGAACTGGGACTCGCAGACGGTGTTCGTCG ATGGCGCCTATCAAGCTGATGAGACGTGGTATGGCAAGAATGGCGAGACTTTTCATCCCGGCCTGCATTATTATGTCGGC GGCAACTCAAAGGTCTATGGCGCGGCGCTTTTCAGACTGCGAGAGCGAGATTTCGGCGAAGTCCAGCACAAGGACGGCGT CTCTCCTGCATGGCCTCTAAAGTACGAGGTGTTCGAGCCCTATTACGGCGAGGCCGAGCGGCTGTTTCACGTTCACGGCC AACGCGGCGAAGATCCGAACGAGCCCCCTTCAAGCGGTCCCTTTCCCTATCCGCCGGTTTCCCACGAGCCGCGCATCCAA ACGCTACAGGACAGCCTGGCGAGAGGCGGCTTGCACCCGTTTCATCTCCCTCTTGGTATTCTTCTTGATGAGGAGCATGG AAAAGTCACGCCGACCAGCATCTGCATCCGCTGCGACGCGTTTGATGGATTTCCCTGTCTTCTGAACGGCAAGGCGGACG CGCAGGTCATGTGCGTCGATCCGGCACTTAAGTTGCACCCCAACCTGACGTTGCTGACCAACGGGTATGTCTCCAGGCTC GGAACGGACGCCAAGGGCAGCAAAGTGAAAGACGTCGCGGTGACGCGCCATGGCAGTGAAGAGCACTACTCGGCCGATAT CGTAGTCGTCGCGTGCGGCGCGCTGTCCTCGGCGCTGCTTCTGCTGCGCTCCGCGAACGACGATCATCCCGATGGCCTCG CCAACGGTTCCGGCCAGGTCGGGCGCAACTACATGCGTCACAATCAGTCCATTCTGATGGCGCTGATGCGCGAACCCAAC GACACGGTATTCCAGAAAACCCTCGCGATCTCCGATTTCTACTTCGGATCGGATGACTGGGAATATCCGCTCGGGTTAAT ACAGATGTGCGCCACGTCGCATGGCGCGCAAATCAGGGGCGAAGCGCTGCCGAGCTGGCTGGAATGGATGCCAAAGATGC CGTTCGATGAGATGGCGCGCCACTCGATGGATTTCTGGTTGTCGAGCGAGGATATTCCGCGGCCGGAAAACCGCATTCGC TACGATGGCGAGCGTGTCGTTCTGGACATCACCGAAGGTGATATGGAAGCTCATCATCGGCTCAAGAAAAAGCTCGAGCA GATATTGAGCAGCGCGGGCGCTCATCCAGTACTCCTGGAGCGCAGCCTTTATCTGGGCAATGACATTCCGATCGGCGGCA CGGCGCATCAAGCAGGGACGGCGCGCTTCGGGACCGATCCCGCGAACTCGGTGCTGGACCTCGACTGCAAGGCCCATCAA CTCGATAACCTGTACATTGCGGATGCCAGCTTCTTTCCATCGATCGGGGCGGTCAATCCGACGCTGACAATCATCGCCAA CGCGCTTCGTGTCGCCGACCGAATCAAGGAAAGACTGAAATGA
Upstream 100 bases:
>100_bases GGCTGGCGTCTGACGATTCCGACTACGTCGTAGGCACCACACTCTTCGTTGACGGGGGCATGACGCTTTACCCCGGCTTC TCGACCAACGGTTGAAGACG
Downstream 100 bases:
>100_bases CGGCCATGTTCTCAAGCGACCTGAGCGGACGCACCACAGACTTTCCGCATTTCTGGGAGCATACGGTCGGCAGCGGCCAT GCGACACTTGCTTTGCGGGC
Product: glucose-methanol-choline oxidoreductase
Products: NA
Alternate protein names: Choline Dehydrogenase; FAD Dependent Oxidoreductase; Oxidoreductase; GMC Oxidoreductase; Dehydrogenase; 2-Keto-Gluconate Dehydrogenase; Flavoprotein Related Choline Dehydrogenase; Dehydrogenase Subunit-Like Protein; Gluconate 2-Dehydrogenase; GMC Oxidoreductase Family; Gluconate Dehydrogenase; Glucose Dehydrogenase; Gluconate 2-Dehydrogenase Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; Dehydrogenase Protein; Oxidoreductase-Like Protein; Dehydrogenase Subunit; Dehydrogenase-Like Protein; L-Sorbose Dehydrogenase; NAD-Dependent Epimerase/Dehydratase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Choline Dehydrogenase-Like Flavoprotein; GMC Family Oxidoreductase; GMC Oxidoreductase Family Protein; N-Terminal Membrane-Anchored Dehydrogenase; Oxidoreductase GMC Family Protein; Gluconate Dehydrogenase Subunit; Glucose Dehydrogenase Subunit Alpha; Capsular Polysaccharide Biosynthesis Oxidoreductase; Dehydrogenase Transmembrane Protein
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MTQHYDVIIIGSGPGGASVAYRLAPTGKRILLIERGDYLPRSRANWDSQTVFVDGAYQADETWYGKNGETFHPGLHYYVG GNSKVYGAALFRLRERDFGEVQHKDGVSPAWPLKYEVFEPYYGEAERLFHVHGQRGEDPNEPPSSGPFPYPPVSHEPRIQ TLQDSLARGGLHPFHLPLGILLDEEHGKVTPTSICIRCDAFDGFPCLLNGKADAQVMCVDPALKLHPNLTLLTNGYVSRL GTDAKGSKVKDVAVTRHGSEEHYSADIVVVACGALSSALLLLRSANDDHPDGLANGSGQVGRNYMRHNQSILMALMREPN DTVFQKTLAISDFYFGSDDWEYPLGLIQMCATSHGAQIRGEALPSWLEWMPKMPFDEMARHSMDFWLSSEDIPRPENRIR YDGERVVLDITEGDMEAHHRLKKKLEQILSSAGAHPVLLERSLYLGNDIPIGGTAHQAGTARFGTDPANSVLDLDCKAHQ LDNLYIADASFFPSIGAVNPTLTIIANALRVADRIKERLK
Sequences:
>Translated_520_residues MTQHYDVIIIGSGPGGASVAYRLAPTGKRILLIERGDYLPRSRANWDSQTVFVDGAYQADETWYGKNGETFHPGLHYYVG GNSKVYGAALFRLRERDFGEVQHKDGVSPAWPLKYEVFEPYYGEAERLFHVHGQRGEDPNEPPSSGPFPYPPVSHEPRIQ TLQDSLARGGLHPFHLPLGILLDEEHGKVTPTSICIRCDAFDGFPCLLNGKADAQVMCVDPALKLHPNLTLLTNGYVSRL GTDAKGSKVKDVAVTRHGSEEHYSADIVVVACGALSSALLLLRSANDDHPDGLANGSGQVGRNYMRHNQSILMALMREPN DTVFQKTLAISDFYFGSDDWEYPLGLIQMCATSHGAQIRGEALPSWLEWMPKMPFDEMARHSMDFWLSSEDIPRPENRIR YDGERVVLDITEGDMEAHHRLKKKLEQILSSAGAHPVLLERSLYLGNDIPIGGTAHQAGTARFGTDPANSVLDLDCKAHQ LDNLYIADASFFPSIGAVNPTLTIIANALRVADRIKERLK >Mature_519_residues TQHYDVIIIGSGPGGASVAYRLAPTGKRILLIERGDYLPRSRANWDSQTVFVDGAYQADETWYGKNGETFHPGLHYYVGG NSKVYGAALFRLRERDFGEVQHKDGVSPAWPLKYEVFEPYYGEAERLFHVHGQRGEDPNEPPSSGPFPYPPVSHEPRIQT LQDSLARGGLHPFHLPLGILLDEEHGKVTPTSICIRCDAFDGFPCLLNGKADAQVMCVDPALKLHPNLTLLTNGYVSRLG TDAKGSKVKDVAVTRHGSEEHYSADIVVVACGALSSALLLLRSANDDHPDGLANGSGQVGRNYMRHNQSILMALMREPND TVFQKTLAISDFYFGSDDWEYPLGLIQMCATSHGAQIRGEALPSWLEWMPKMPFDEMARHSMDFWLSSEDIPRPENRIRY DGERVVLDITEGDMEAHHRLKKKLEQILSSAGAHPVLLERSLYLGNDIPIGGTAHQAGTARFGTDPANSVLDLDCKAHQL DNLYIADASFFPSIGAVNPTLTIIANALRVADRIKERLK
Specific function: Unknown
COG id: COG2303
COG function: function code E; Choline dehydrogenase and related flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57539; Mature: 57407
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHYDVIIIGSGPGGASVAYRLAPTGKRILLIERGDYLPRSRANWDSQTVFVDGAYQAD CCCEEEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCEECC ETWYGKNGETFHPGLHYYVGGNSKVYGAALFRLRERDFGEVQHKDGVSPAWPLKYEVFEP CCEECCCCCEECCCEEEEECCCCEEHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCC YYGEAERLFHVHGQRGEDPNEPPSSGPFPYPPVSHEPRIQTLQDSLARGGLHPFHLPLGI CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCEEE LLDEEHGKVTPTSICIRCDAFDGFPCLLNGKADAQVMCVDPALKLHPNLTLLTNGYVSRL EEECCCCCCCCCEEEEEEECCCCCCEEECCCCCCEEEEECCCEEECCCEEEEECCHHHHC GTDAKGSKVKDVAVTRHGSEEHYSADIVVVACGALSSALLLLRSANDDHPDGLANGSGQV CCCCCCCEEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHH GRNYMRHNQSILMALMREPNDTVFQKTLAISDFYFGSDDWEYPLGLIQMCATSHGAQIRG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCEEEC EALPSWLEWMPKMPFDEMARHSMDFWLSSEDIPRPENRIRYDGERVVLDITEGDMEAHHR CCCCHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCHHHEEECCCEEEEEECCCCHHHHHH LKKKLEQILSSAGAHPVLLERSLYLGNDIPIGGTAHQAGTARFGTDPANSVLDLDCKAHQ HHHHHHHHHHHCCCCEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHC LDNLYIADASFFPSIGAVNPTLTIIANALRVADRIKERLK CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TQHYDVIIIGSGPGGASVAYRLAPTGKRILLIERGDYLPRSRANWDSQTVFVDGAYQAD CCEEEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCEECC ETWYGKNGETFHPGLHYYVGGNSKVYGAALFRLRERDFGEVQHKDGVSPAWPLKYEVFEP CCEECCCCCEECCCEEEEECCCCEEHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCC YYGEAERLFHVHGQRGEDPNEPPSSGPFPYPPVSHEPRIQTLQDSLARGGLHPFHLPLGI CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCEEE LLDEEHGKVTPTSICIRCDAFDGFPCLLNGKADAQVMCVDPALKLHPNLTLLTNGYVSRL EEECCCCCCCCCEEEEEEECCCCCCEEECCCCCCEEEEECCCEEECCCEEEEECCHHHHC GTDAKGSKVKDVAVTRHGSEEHYSADIVVVACGALSSALLLLRSANDDHPDGLANGSGQV CCCCCCCEEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHH GRNYMRHNQSILMALMREPNDTVFQKTLAISDFYFGSDDWEYPLGLIQMCATSHGAQIRG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCEEEC EALPSWLEWMPKMPFDEMARHSMDFWLSSEDIPRPENRIRYDGERVVLDITEGDMEAHHR CCCCHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCHHHEEECCCEEEEEECCCCHHHHHH LKKKLEQILSSAGAHPVLLERSLYLGNDIPIGGTAHQAGTARFGTDPANSVLDLDCKAHQ HHHHHHHHHHHCCCCEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHC LDNLYIADASFFPSIGAVNPTLTIIANALRVADRIKERLK CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA