Definition Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence.
Accession NC_009467
Length 203,589

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The map label for this gene is 148243664

Identifier: 148243664

GI number: 148243664

Start: 32235

End: 33797

Strand: Reverse

Name: 148243664

Synonym: Acry_3135

Alternate gene names: NA

Gene position: 33797-32235 (Counterclockwise)

Preceding gene: 148243665

Following gene: 148243663

Centisome position: 16.6

GC content: 58.8

Gene sequence:

>1563_bases
ATGACGCAGCATTACGACGTCATCATCATCGGAAGCGGCCCTGGTGGCGCATCTGTCGCGTATCGCCTCGCGCCAACCGG
CAAACGCATCTTGCTGATTGAGCGTGGCGATTATCTGCCGCGTTCGCGTGCGAACTGGGACTCGCAGACGGTGTTCGTCG
ATGGCGCCTATCAAGCTGATGAGACGTGGTATGGCAAGAATGGCGAGACTTTTCATCCCGGCCTGCATTATTATGTCGGC
GGCAACTCAAAGGTCTATGGCGCGGCGCTTTTCAGACTGCGAGAGCGAGATTTCGGCGAAGTCCAGCACAAGGACGGCGT
CTCTCCTGCATGGCCTCTAAAGTACGAGGTGTTCGAGCCCTATTACGGCGAGGCCGAGCGGCTGTTTCACGTTCACGGCC
AACGCGGCGAAGATCCGAACGAGCCCCCTTCAAGCGGTCCCTTTCCCTATCCGCCGGTTTCCCACGAGCCGCGCATCCAA
ACGCTACAGGACAGCCTGGCGAGAGGCGGCTTGCACCCGTTTCATCTCCCTCTTGGTATTCTTCTTGATGAGGAGCATGG
AAAAGTCACGCCGACCAGCATCTGCATCCGCTGCGACGCGTTTGATGGATTTCCCTGTCTTCTGAACGGCAAGGCGGACG
CGCAGGTCATGTGCGTCGATCCGGCACTTAAGTTGCACCCCAACCTGACGTTGCTGACCAACGGGTATGTCTCCAGGCTC
GGAACGGACGCCAAGGGCAGCAAAGTGAAAGACGTCGCGGTGACGCGCCATGGCAGTGAAGAGCACTACTCGGCCGATAT
CGTAGTCGTCGCGTGCGGCGCGCTGTCCTCGGCGCTGCTTCTGCTGCGCTCCGCGAACGACGATCATCCCGATGGCCTCG
CCAACGGTTCCGGCCAGGTCGGGCGCAACTACATGCGTCACAATCAGTCCATTCTGATGGCGCTGATGCGCGAACCCAAC
GACACGGTATTCCAGAAAACCCTCGCGATCTCCGATTTCTACTTCGGATCGGATGACTGGGAATATCCGCTCGGGTTAAT
ACAGATGTGCGCCACGTCGCATGGCGCGCAAATCAGGGGCGAAGCGCTGCCGAGCTGGCTGGAATGGATGCCAAAGATGC
CGTTCGATGAGATGGCGCGCCACTCGATGGATTTCTGGTTGTCGAGCGAGGATATTCCGCGGCCGGAAAACCGCATTCGC
TACGATGGCGAGCGTGTCGTTCTGGACATCACCGAAGGTGATATGGAAGCTCATCATCGGCTCAAGAAAAAGCTCGAGCA
GATATTGAGCAGCGCGGGCGCTCATCCAGTACTCCTGGAGCGCAGCCTTTATCTGGGCAATGACATTCCGATCGGCGGCA
CGGCGCATCAAGCAGGGACGGCGCGCTTCGGGACCGATCCCGCGAACTCGGTGCTGGACCTCGACTGCAAGGCCCATCAA
CTCGATAACCTGTACATTGCGGATGCCAGCTTCTTTCCATCGATCGGGGCGGTCAATCCGACGCTGACAATCATCGCCAA
CGCGCTTCGTGTCGCCGACCGAATCAAGGAAAGACTGAAATGA

Upstream 100 bases:

>100_bases
GGCTGGCGTCTGACGATTCCGACTACGTCGTAGGCACCACACTCTTCGTTGACGGGGGCATGACGCTTTACCCCGGCTTC
TCGACCAACGGTTGAAGACG

Downstream 100 bases:

>100_bases
CGGCCATGTTCTCAAGCGACCTGAGCGGACGCACCACAGACTTTCCGCATTTCTGGGAGCATACGGTCGGCAGCGGCCAT
GCGACACTTGCTTTGCGGGC

Product: glucose-methanol-choline oxidoreductase

Products: NA

Alternate protein names: Choline Dehydrogenase; FAD Dependent Oxidoreductase; Oxidoreductase; GMC Oxidoreductase; Dehydrogenase; 2-Keto-Gluconate Dehydrogenase; Flavoprotein Related Choline Dehydrogenase; Dehydrogenase Subunit-Like Protein; Gluconate 2-Dehydrogenase; GMC Oxidoreductase Family; Gluconate Dehydrogenase; Glucose Dehydrogenase; Gluconate 2-Dehydrogenase Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; Dehydrogenase Protein; Oxidoreductase-Like Protein; Dehydrogenase Subunit; Dehydrogenase-Like Protein; L-Sorbose Dehydrogenase; NAD-Dependent Epimerase/Dehydratase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Choline Dehydrogenase-Like Flavoprotein; GMC Family Oxidoreductase; GMC Oxidoreductase Family Protein; N-Terminal Membrane-Anchored Dehydrogenase; Oxidoreductase GMC Family Protein; Gluconate Dehydrogenase Subunit; Glucose Dehydrogenase Subunit Alpha; Capsular Polysaccharide Biosynthesis Oxidoreductase; Dehydrogenase Transmembrane Protein

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MTQHYDVIIIGSGPGGASVAYRLAPTGKRILLIERGDYLPRSRANWDSQTVFVDGAYQADETWYGKNGETFHPGLHYYVG
GNSKVYGAALFRLRERDFGEVQHKDGVSPAWPLKYEVFEPYYGEAERLFHVHGQRGEDPNEPPSSGPFPYPPVSHEPRIQ
TLQDSLARGGLHPFHLPLGILLDEEHGKVTPTSICIRCDAFDGFPCLLNGKADAQVMCVDPALKLHPNLTLLTNGYVSRL
GTDAKGSKVKDVAVTRHGSEEHYSADIVVVACGALSSALLLLRSANDDHPDGLANGSGQVGRNYMRHNQSILMALMREPN
DTVFQKTLAISDFYFGSDDWEYPLGLIQMCATSHGAQIRGEALPSWLEWMPKMPFDEMARHSMDFWLSSEDIPRPENRIR
YDGERVVLDITEGDMEAHHRLKKKLEQILSSAGAHPVLLERSLYLGNDIPIGGTAHQAGTARFGTDPANSVLDLDCKAHQ
LDNLYIADASFFPSIGAVNPTLTIIANALRVADRIKERLK

Sequences:

>Translated_520_residues
MTQHYDVIIIGSGPGGASVAYRLAPTGKRILLIERGDYLPRSRANWDSQTVFVDGAYQADETWYGKNGETFHPGLHYYVG
GNSKVYGAALFRLRERDFGEVQHKDGVSPAWPLKYEVFEPYYGEAERLFHVHGQRGEDPNEPPSSGPFPYPPVSHEPRIQ
TLQDSLARGGLHPFHLPLGILLDEEHGKVTPTSICIRCDAFDGFPCLLNGKADAQVMCVDPALKLHPNLTLLTNGYVSRL
GTDAKGSKVKDVAVTRHGSEEHYSADIVVVACGALSSALLLLRSANDDHPDGLANGSGQVGRNYMRHNQSILMALMREPN
DTVFQKTLAISDFYFGSDDWEYPLGLIQMCATSHGAQIRGEALPSWLEWMPKMPFDEMARHSMDFWLSSEDIPRPENRIR
YDGERVVLDITEGDMEAHHRLKKKLEQILSSAGAHPVLLERSLYLGNDIPIGGTAHQAGTARFGTDPANSVLDLDCKAHQ
LDNLYIADASFFPSIGAVNPTLTIIANALRVADRIKERLK
>Mature_519_residues
TQHYDVIIIGSGPGGASVAYRLAPTGKRILLIERGDYLPRSRANWDSQTVFVDGAYQADETWYGKNGETFHPGLHYYVGG
NSKVYGAALFRLRERDFGEVQHKDGVSPAWPLKYEVFEPYYGEAERLFHVHGQRGEDPNEPPSSGPFPYPPVSHEPRIQT
LQDSLARGGLHPFHLPLGILLDEEHGKVTPTSICIRCDAFDGFPCLLNGKADAQVMCVDPALKLHPNLTLLTNGYVSRLG
TDAKGSKVKDVAVTRHGSEEHYSADIVVVACGALSSALLLLRSANDDHPDGLANGSGQVGRNYMRHNQSILMALMREPND
TVFQKTLAISDFYFGSDDWEYPLGLIQMCATSHGAQIRGEALPSWLEWMPKMPFDEMARHSMDFWLSSEDIPRPENRIRY
DGERVVLDITEGDMEAHHRLKKKLEQILSSAGAHPVLLERSLYLGNDIPIGGTAHQAGTARFGTDPANSVLDLDCKAHQL
DNLYIADASFFPSIGAVNPTLTIIANALRVADRIKERLK

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57539; Mature: 57407

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQHYDVIIIGSGPGGASVAYRLAPTGKRILLIERGDYLPRSRANWDSQTVFVDGAYQAD
CCCEEEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCEECC
ETWYGKNGETFHPGLHYYVGGNSKVYGAALFRLRERDFGEVQHKDGVSPAWPLKYEVFEP
CCEECCCCCEECCCEEEEECCCCEEHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCC
YYGEAERLFHVHGQRGEDPNEPPSSGPFPYPPVSHEPRIQTLQDSLARGGLHPFHLPLGI
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCEEE
LLDEEHGKVTPTSICIRCDAFDGFPCLLNGKADAQVMCVDPALKLHPNLTLLTNGYVSRL
EEECCCCCCCCCEEEEEEECCCCCCEEECCCCCCEEEEECCCEEECCCEEEEECCHHHHC
GTDAKGSKVKDVAVTRHGSEEHYSADIVVVACGALSSALLLLRSANDDHPDGLANGSGQV
CCCCCCCEEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
GRNYMRHNQSILMALMREPNDTVFQKTLAISDFYFGSDDWEYPLGLIQMCATSHGAQIRG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCEEEC
EALPSWLEWMPKMPFDEMARHSMDFWLSSEDIPRPENRIRYDGERVVLDITEGDMEAHHR
CCCCHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCHHHEEECCCEEEEEECCCCHHHHHH
LKKKLEQILSSAGAHPVLLERSLYLGNDIPIGGTAHQAGTARFGTDPANSVLDLDCKAHQ
HHHHHHHHHHHCCCCEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHC
LDNLYIADASFFPSIGAVNPTLTIIANALRVADRIKERLK
CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQHYDVIIIGSGPGGASVAYRLAPTGKRILLIERGDYLPRSRANWDSQTVFVDGAYQAD
CCEEEEEEEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCEECC
ETWYGKNGETFHPGLHYYVGGNSKVYGAALFRLRERDFGEVQHKDGVSPAWPLKYEVFEP
CCEECCCCCEECCCEEEEECCCCEEHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEECCC
YYGEAERLFHVHGQRGEDPNEPPSSGPFPYPPVSHEPRIQTLQDSLARGGLHPFHLPLGI
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCEEE
LLDEEHGKVTPTSICIRCDAFDGFPCLLNGKADAQVMCVDPALKLHPNLTLLTNGYVSRL
EEECCCCCCCCCEEEEEEECCCCCCEEECCCCCCEEEEECCCEEECCCEEEEECCHHHHC
GTDAKGSKVKDVAVTRHGSEEHYSADIVVVACGALSSALLLLRSANDDHPDGLANGSGQV
CCCCCCCEEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
GRNYMRHNQSILMALMREPNDTVFQKTLAISDFYFGSDDWEYPLGLIQMCATSHGAQIRG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCEEEC
EALPSWLEWMPKMPFDEMARHSMDFWLSSEDIPRPENRIRYDGERVVLDITEGDMEAHHR
CCCCHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCHHHEEECCCEEEEEECCCCHHHHHH
LKKKLEQILSSAGAHPVLLERSLYLGNDIPIGGTAHQAGTARFGTDPANSVLDLDCKAHQ
HHHHHHHHHHHCCCCEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHC
LDNLYIADASFFPSIGAVNPTLTIIANALRVADRIKERLK
CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA