Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
---|---|
Accession | NC_009350 |
Length | 155,098 |
Click here to switch to the map view.
The map label for this gene is 145301539
Identifier: 145301539
GI number: 145301539
Start: 153097
End: 154692
Strand: Reverse
Name: 145301539
Synonym: ASA_P5G164
Alternate gene names: NA
Gene position: 154692-153097 (Counterclockwise)
Preceding gene: NA
Following gene: 145301538
Centisome position: 99.74
GC content: 57.64
Gene sequence:
>1596_bases ATGAGAAATGTGGCAAGGAAAGGGGACCCGACGAGCACTGGTGGGATGATCCAAGACGGGGACAACAGCTGGCTCAGCGA GGGGGCCCCAACAACTTACATCGGAATGGTAGCGACCTGCTCAGCTTGCAAAGTTGGGCAAGGCCCTATTGTTGCAGTCG GTCCCCGTTCCATCATCGGGCCAGGTGGGCCGGTGGCACTGCAAGGGGATTATGTGGCCTGTGGCTGCCCAACGATGAGC AACACAATCCTACCCGCCCAGGGGACAACGGTTGGCGACAACATGGGCCCCCGTGCCAAAGCAGCCAGCGTTCCCGCCGA GCCACCCGCACCGGTCAGTTCACCGATGACCCCCCTCGTTCCGCTGGTTGATCCCTCCGTGACTAGGATCGGCATCTTCT TCGATGGCACCCAGAACAACATGCACAACAGCAAGCTCAAGGAGCAATGCGAGAGCGCCAGTGATGCCGTGTGTTCGTCA ATAGAGAAGCTGATTGGCACCGGAACGTCATACGACAACGGCCGCACCAATGTGGCACGTCTACATGATGCCTACATGGG GAAGGCCATCTACATCGAGGGGATCGGCACCCAATCCGGTTTGGCGGACGACACAAAGGGCCTAGCTCTTGGTGTCGGTG GAACCGGCGTGATTATGAAAGCGCAAATGGGCCTGAATCAGCTAACTACCCAAGTTCAATCCCTCCCACCCGGCAGTGTT GTGGTTGATGTATTCGGGTTTAGCCGCGGCGCCGCCGCTGCGCGTCACTTCATCAACAAGCTGCTCGCACTAAACCTGGG TAGGCCAGTTCGAGTGGGGTTTGTCGGCCTGTTTGACACTGTAGCGGCTATCGGCTCCGCGGCGGATGGCCTGGATACGG CCGATGACAACAATTTGGGTGTGTTGCTCTACCTTGCCCCAGGATGCGCCGATCAGGTGGTGCAACTCACTGCGAGCCAT GAATACCGGGTCAACTTCGCCCTCAACTCAATCAGCGCGAACCACCGTGAGATCCCCCTATACGGAGCCCATAGCGACAT AGGTGGCGGGTATCTTGCCGGTGAGGAGCGGATCCCCATAGCTAGACCCTATGAGGTCACCATGATGATGGGTGATCAAG CCGCCTTTAAGGCATTCAAGTCCGAAGCCACCAAGCGTTACTATGAGGCGCAGAAAGTCTATCAGGCATACCTGGCTGAC CCTGCACAACTCAAAGACGAGCTTCACCAATACTCGATCCCCACACCGTCGGGCGGAAGGACTGGCTACATTGCCAACAC GATTATGACCAGGTATGTCAAACCTGAGCTGCAACTGCTTGCGGGCCACCTTATGCGACAGCTTGCCGCAGAGTCAGGCG TTCCTATTCAAGCTCTTGCTGAAACCATTCCAGACGAGCTTACTGCGATATTTGCTGCCTACCTGGCGGCGGCTACAACG GGTGGGCTGCCGACGCTGACTCCAGAGCAGGAGCACCTGATCATGACCCTGTACGCCCACTGCTCCGACAGCTGGGTAAC ATCGGCAGGGCTTTTCGTTAATGCGCCAGCGCCATCCAGAACGCGCATGGTGTATCAGCAACAGCAAGGGAAATAG
Upstream 100 bases:
>100_bases GTACGACGGAAGCAGGCGCACCCAGCTCACAATCCGAGCTCGTTCAGCGTTCGTAAGTTTCATTTGAAGTATCATTCCTC TCTTAGTATGGAGGAATGCG
Downstream 100 bases:
>100_bases CCACATGAAGATGTGCAGGGCTGTCATGCTCGTAGCCATAATAGGGCTGATAGCCATAGCCGTGGTCAGCCTTATCAACT CCGGGACAGACAAGCCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MRNVARKGDPTSTGGMIQDGDNSWLSEGAPTTYIGMVATCSACKVGQGPIVAVGPRSIIGPGGPVALQGDYVACGCPTMS NTILPAQGTTVGDNMGPRAKAASVPAEPPAPVSSPMTPLVPLVDPSVTRIGIFFDGTQNNMHNSKLKEQCESASDAVCSS IEKLIGTGTSYDNGRTNVARLHDAYMGKAIYIEGIGTQSGLADDTKGLALGVGGTGVIMKAQMGLNQLTTQVQSLPPGSV VVDVFGFSRGAAAARHFINKLLALNLGRPVRVGFVGLFDTVAAIGSAADGLDTADDNNLGVLLYLAPGCADQVVQLTASH EYRVNFALNSISANHREIPLYGAHSDIGGGYLAGEERIPIARPYEVTMMMGDQAAFKAFKSEATKRYYEAQKVYQAYLAD PAQLKDELHQYSIPTPSGGRTGYIANTIMTRYVKPELQLLAGHLMRQLAAESGVPIQALAETIPDELTAIFAAYLAAATT GGLPTLTPEQEHLIMTLYAHCSDSWVTSAGLFVNAPAPSRTRMVYQQQQGK
Sequences:
>Translated_531_residues MRNVARKGDPTSTGGMIQDGDNSWLSEGAPTTYIGMVATCSACKVGQGPIVAVGPRSIIGPGGPVALQGDYVACGCPTMS NTILPAQGTTVGDNMGPRAKAASVPAEPPAPVSSPMTPLVPLVDPSVTRIGIFFDGTQNNMHNSKLKEQCESASDAVCSS IEKLIGTGTSYDNGRTNVARLHDAYMGKAIYIEGIGTQSGLADDTKGLALGVGGTGVIMKAQMGLNQLTTQVQSLPPGSV VVDVFGFSRGAAAARHFINKLLALNLGRPVRVGFVGLFDTVAAIGSAADGLDTADDNNLGVLLYLAPGCADQVVQLTASH EYRVNFALNSISANHREIPLYGAHSDIGGGYLAGEERIPIARPYEVTMMMGDQAAFKAFKSEATKRYYEAQKVYQAYLAD PAQLKDELHQYSIPTPSGGRTGYIANTIMTRYVKPELQLLAGHLMRQLAAESGVPIQALAETIPDELTAIFAAYLAAATT GGLPTLTPEQEHLIMTLYAHCSDSWVTSAGLFVNAPAPSRTRMVYQQQQGK >Mature_531_residues MRNVARKGDPTSTGGMIQDGDNSWLSEGAPTTYIGMVATCSACKVGQGPIVAVGPRSIIGPGGPVALQGDYVACGCPTMS NTILPAQGTTVGDNMGPRAKAASVPAEPPAPVSSPMTPLVPLVDPSVTRIGIFFDGTQNNMHNSKLKEQCESASDAVCSS IEKLIGTGTSYDNGRTNVARLHDAYMGKAIYIEGIGTQSGLADDTKGLALGVGGTGVIMKAQMGLNQLTTQVQSLPPGSV VVDVFGFSRGAAAARHFINKLLALNLGRPVRVGFVGLFDTVAAIGSAADGLDTADDNNLGVLLYLAPGCADQVVQLTASH EYRVNFALNSISANHREIPLYGAHSDIGGGYLAGEERIPIARPYEVTMMMGDQAAFKAFKSEATKRYYEAQKVYQAYLAD PAQLKDELHQYSIPTPSGGRTGYIANTIMTRYVKPELQLLAGHLMRQLAAESGVPIQALAETIPDELTAIFAAYLAAATT GGLPTLTPEQEHLIMTLYAHCSDSWVTSAGLFVNAPAPSRTRMVYQQQQGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55828; Mature: 55828
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNVARKGDPTSTGGMIQDGDNSWLSEGAPTTYIGMVATCSACKVGQGPIVAVGPRSIIG CCCCCCCCCCCCCCCEEECCCCCHHHCCCCEEEHHHHHHHHHCCCCCCCEEEECCCCEEC PGGPVALQGDYVACGCPTMSNTILPAQGTTVGDNMGPRAKAASVPAEPPAPVSSPMTPLV CCCCEEEECCEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLVDPSVTRIGIFFDGTQNNMHNSKLKEQCESASDAVCSSIEKLIGTGTSYDNGRTNVAR CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LHDAYMGKAIYIEGIGTQSGLADDTKGLALGVGGTGVIMKAQMGLNQLTTQVQSLPPGSV HHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCE VVDVFGFSRGAAAARHFINKLLALNLGRPVRVGFVGLFDTVAAIGSAADGLDTADDNNLG EEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCE VLLYLAPGCADQVVQLTASHEYRVNFALNSISANHREIPLYGAHSDIGGGYLAGEERIPI EEEEECCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEECCCCCCCCEECCCCCCCC ARPYEVTMMMGDQAAFKAFKSEATKRYYEAQKVYQAYLADPAQLKDELHQYSIPTPSGGR CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC TGYIANTIMTRYVKPELQLLAGHLMRQLAAESGVPIQALAETIPDELTAIFAAYLAAATT CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHC GGLPTLTPEQEHLIMTLYAHCSDSWVTSAGLFVNAPAPSRTRMVYQQQQGK CCCCCCCCCCCCEEEEEEECCCCCCEEECCEEEECCCCCHHHHHHHHCCCC >Mature Secondary Structure MRNVARKGDPTSTGGMIQDGDNSWLSEGAPTTYIGMVATCSACKVGQGPIVAVGPRSIIG CCCCCCCCCCCCCCCEEECCCCCHHHCCCCEEEHHHHHHHHHCCCCCCCEEEECCCCEEC PGGPVALQGDYVACGCPTMSNTILPAQGTTVGDNMGPRAKAASVPAEPPAPVSSPMTPLV CCCCEEEECCEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLVDPSVTRIGIFFDGTQNNMHNSKLKEQCESASDAVCSSIEKLIGTGTSYDNGRTNVAR CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LHDAYMGKAIYIEGIGTQSGLADDTKGLALGVGGTGVIMKAQMGLNQLTTQVQSLPPGSV HHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHCCCCCCE VVDVFGFSRGAAAARHFINKLLALNLGRPVRVGFVGLFDTVAAIGSAADGLDTADDNNLG EEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCE VLLYLAPGCADQVVQLTASHEYRVNFALNSISANHREIPLYGAHSDIGGGYLAGEERIPI EEEEECCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCCEEEECCCCCCCCEECCCCCCCC ARPYEVTMMMGDQAAFKAFKSEATKRYYEAQKVYQAYLADPAQLKDELHQYSIPTPSGGR CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC TGYIANTIMTRYVKPELQLLAGHLMRQLAAESGVPIQALAETIPDELTAIFAAYLAAATT CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHC GGLPTLTPEQEHLIMTLYAHCSDSWVTSAGLFVNAPAPSRTRMVYQQQQGK CCCCCCCCCCCCEEEEEEECCCCCCEEECCEEEECCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA