Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
---|---|
Accession | NC_009350 |
Length | 155,098 |
Click here to switch to the map view.
The map label for this gene is 145301528
Identifier: 145301528
GI number: 145301528
Start: 142518
End: 142736
Strand: Direct
Name: 145301528
Synonym: ASA_P5G152
Alternate gene names: NA
Gene position: 142518-142736 (Clockwise)
Preceding gene: 145301527
Following gene: 145301535
Centisome position: 91.89
GC content: 54.34
Gene sequence:
>219_bases ATGCGGTTCGGCATTCGCCGCCTACGAGAGAGTGACCATGAGCTTAAAAAATATCAGAACTGGCTGGCCCATTACCTGGT AAGTCGCCGCGATGGCGATCACGCCTTGGCGGCTGAACTGGCGGGGATGATTTGTGGTTACTGGGAAGGGCTTGGTAATA CTGTCGAACTGGACAAGTGGGCGCGAGTCAAAGACGAGCACCACGCAAAGATAACCTGA
Upstream 100 bases:
>100_bases GCCTTTTCGGCAACGAAGGTTGCGATGGTCATGTCCGCAAGCACCCAACTTTTTATGGCGAATGCCGAGAGAAACAGCAT GGTATGGGGGATAACACGCC
Downstream 100 bases:
>100_bases CCAGACAATCAAACTCCACATTCAACAAGTCAAAACTCAGATTTGATTTATTTGCATCCAAGCATGGTGTTGAATAGGGT AGCACCGCCGCTTGGCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MRFGIRRLRESDHELKKYQNWLAHYLVSRRDGDHALAAELAGMICGYWEGLGNTVELDKWARVKDEHHAKIT
Sequences:
>Translated_72_residues MRFGIRRLRESDHELKKYQNWLAHYLVSRRDGDHALAAELAGMICGYWEGLGNTVELDKWARVKDEHHAKIT >Mature_72_residues MRFGIRRLRESDHELKKYQNWLAHYLVSRRDGDHALAAELAGMICGYWEGLGNTVELDKWARVKDEHHAKIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8464; Mature: 8464
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFGIRRLRESDHELKKYQNWLAHYLVSRRDGDHALAAELAGMICGYWEGLGNTVELDKW CCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH ARVKDEHHAKIT HHHCCCCCCCCC >Mature Secondary Structure MRFGIRRLRESDHELKKYQNWLAHYLVSRRDGDHALAAELAGMICGYWEGLGNTVELDKW CCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHH ARVKDEHHAKIT HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA