Definition Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence.
Accession NC_009350
Length 155,098

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The map label for this gene is ybdy [C]

Identifier: 145301527

GI number: 145301527

Start: 142238

End: 142390

Strand: Direct

Name: ybdy [C]

Synonym: ASA_P5G151

Alternate gene names: 145301527

Gene position: 142238-142390 (Clockwise)

Preceding gene: 145301525

Following gene: 145301528

Centisome position: 91.71

GC content: 54.9

Gene sequence:

>153_bases
ATGCCTGGAAAAACCGCCGTGATGGCGTTGCTCATTGTGTGTGTCACAGTGCTGGCGTTTACCGCGCTGGTACGAGATTC
ACTGTGTGAGCTAAGTGTGCGGCAAGGCGGCACGGAAATCCGGGCCTATCTTGCTTACGAACCGAGAGAGTAA

Upstream 100 bases:

>100_bases
AGATAGACGAAAGCCCCGAAGGTCAATTTTCATTAACCAACGAGGCCCAACATAATGTTCGCAAAACTGATGTTAGCCTC
TCTCGACGCAGGAGGCAAGT

Downstream 100 bases:

>100_bases
CCGGCAAGGCGGGGGTTCCGAACCCCTGCCTTTTCGGCAACGAAGGTTGCGATGGTCATGTCCGCAAGCACCCAACTTTT
TATGGCGAATGCCGAGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 50; Mature: 49

Protein sequence:

>50_residues
MPGKTAVMALLIVCVTVLAFTALVRDSLCELSVRQGGTEIRAYLAYEPRE

Sequences:

>Translated_50_residues
MPGKTAVMALLIVCVTVLAFTALVRDSLCELSVRQGGTEIRAYLAYEPRE
>Mature_49_residues
PGKTAVMALLIVCVTVLAFTALVRDSLCELSVRQGGTEIRAYLAYEPRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5457; Mature: 5325

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS00556 HOK_GEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGKTAVMALLIVCVTVLAFTALVRDSLCELSVRQGGTEIRAYLAYEPRE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCC
>Mature Secondary Structure 
PGKTAVMALLIVCVTVLAFTALVRDSLCELSVRQGGTEIRAYLAYEPRE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA