Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is klcA [H]
Identifier: 145301509
GI number: 145301509
Start: 127874
End: 128278
Strand: Reverse
Name: klcA [H]
Synonym: ASA_P5G131
Alternate gene names: 145301509
Gene position: 128278-127874 (Counterclockwise)
Preceding gene: 145301510
Following gene: 145301507
Centisome position: 82.71
GC content: 40.74
Gene sequence:
>405_bases ATGGATGCTTTAATTGCTGGTCTGGTTATTGATTCTAAACGTATGGACATGATGCCTAAATACTTCGGACGCTGGATGAT GAAAACTGAAGGTAACATTTATGGCTGGATGAAAGAAATCTGCGCATCGTACAGCGGCGGTTATTGGGATATGTGGGAGG TATCGAATGGTGCATTCTTTATGGTTCCCCCTTTGAAAAAAGAAGGTTACACACTATCAATTAATGGTAATGGTTTTGAG GGAGTGTTGACTGCCCACGCTACCGGTGTTGTGGCTTGTCTTTTTGCATACTATTACATGTGGGAAATGACAGACGATGA TCTCTTTGTAAGACTCTATCACGCACTTCGTGAATATGCATTGACGTTAGAAGAGCATAGTTTGATTTTTAGCGCATTAG ATTAA
Upstream 100 bases:
>100_bases TAAGGCGATTGCGGCGGCGCAGTGGCATTAAAATTCAGGCAACAAAAACCATCAATGTATAACGGTCTGGGAGTGGCCCA GACCTAACAAGGGGTGATGT
Downstream 100 bases:
>100_bases TCAGGTTTGCTTCCCTTGCTGTTATTTGGCCCCTGATGTTTGGGGCCTTTTTTGATCTCGTCATACGTGAGCTTGACCCG TTCGGCGTACCATTTACGTT
Product: antirestriction protein KlcA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MDALIAGLVIDSKRMDMMPKYFGRWMMKTEGNIYGWMKEICASYSGGYWDMWEVSNGAFFMVPPLKKEGYTLSINGNGFE GVLTAHATGVVACLFAYYYMWEMTDDDLFVRLYHALREYALTLEEHSLIFSALD
Sequences:
>Translated_134_residues MDALIAGLVIDSKRMDMMPKYFGRWMMKTEGNIYGWMKEICASYSGGYWDMWEVSNGAFFMVPPLKKEGYTLSINGNGFE GVLTAHATGVVACLFAYYYMWEMTDDDLFVRLYHALREYALTLEEHSLIFSALD >Mature_134_residues MDALIAGLVIDSKRMDMMPKYFGRWMMKTEGNIYGWMKEICASYSGGYWDMWEVSNGAFFMVPPLKKEGYTLSINGNGFE GVLTAHATGVVACLFAYYYMWEMTDDDLFVRLYHALREYALTLEEHSLIFSALD
Specific function: Could be involved in overcoming restriction barriers during establishment after conjugative transfer [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the antirestriction protein family [H]
Homologues:
Organism=Escherichia coli, GI1786442, Length=135, Percent_Identity=36.2962962962963, Blast_Score=87, Evalue=5e-19, Organism=Escherichia coli, GI1788996, Length=130, Percent_Identity=33.0769230769231, Blast_Score=75, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004914 - ProDom: PD012854 [H]
Pfam domain/function: PF03230 Antirestrict [H]
EC number: NA
Molecular weight: Translated: 15423; Mature: 15423
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 8.2 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 8.2 %Met (Mature Protein) 9.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDALIAGLVIDSKRMDMMPKYFGRWMMKTEGNIYGWMKEICASYSGGYWDMWEVSNGAFF CCCHHEEEEECCHHHHCCHHHHCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCEE MVPPLKKEGYTLSINGNGFEGVLTAHATGVVACLFAYYYMWEMTDDDLFVRLYHALREYA EECCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LTLEEHSLIFSALD HHHHHHHEEEEECC >Mature Secondary Structure MDALIAGLVIDSKRMDMMPKYFGRWMMKTEGNIYGWMKEICASYSGGYWDMWEVSNGAFF CCCHHEEEEECCHHHHCCHHHHCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCEE MVPPLKKEGYTLSINGNGFEGVLTAHATGVVACLFAYYYMWEMTDDDLFVRLYHALREYA EECCCCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LTLEEHSLIFSALD HHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7773415 [H]