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The map label for this gene is traM [H]

Identifier: 145301507

GI number: 145301507

Start: 126478

End: 126846

Strand: Reverse

Name: traM [H]

Synonym: ASA_P5G129

Alternate gene names: 145301507

Gene position: 126846-126478 (Counterclockwise)

Preceding gene: 145301509

Following gene: 145301504

Centisome position: 81.78

GC content: 46.61

Gene sequence:

>369_bases
ATGCCAAGAGTTCAGGTATATCTTAAGCACAATTGCATTGATGAGATACATGAGTTAGTTGAGGAGGATATTCAGGCTGG
CGCAAACCCGGCAGAGGTCAGTTTTTCCAGTAAAGCCTGTATGTTATTGGAGCTGGGACTGCGAGTTTACAATCTTCGGC
GCTCTGAGCATGCAGGAAGTGGCCATGACGACTTTGACCGGGTATTATTGCAAACTTGCCTGGAGTCCATGTTTCTCAGC
CAGCACCTGACAGCCAAGCTTGGTAATATGGAAAAAGGTGAAAAAGAGTTGTTGCGAGTATCTATTGATAGGAAGGTGGC
AGAAAAGATGGAGCCCTTCTTTCCTGCTACTGACGATGAGCAGGACTGA

Upstream 100 bases:

>100_bases
GTCGTTGTTTTTTGATGATTTTGGAGACGAAAGCCCTTGGTGGACTACAACTAGAGTCCCACATACAATGACGGTTAATA
ACAAACCAAGGAGCTATAAC

Downstream 100 bases:

>100_bases
CAAAAAAAGAAACCGGCCCATGGCCGGTTTCTTTTTTACTCCCCCTTGGTCAATTCCTTGATGATCTCCCTTTCCAGCTT
ATCCAGTTTGTCGTGGAGTT

Product: conjugal transfer protein TraM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MPRVQVYLKHNCIDEIHELVEEDIQAGANPAEVSFSSKACMLLELGLRVYNLRRSEHAGSGHDDFDRVLLQTCLESMFLS
QHLTAKLGNMEKGEKELLRVSIDRKVAEKMEPFFPATDDEQD

Sequences:

>Translated_122_residues
MPRVQVYLKHNCIDEIHELVEEDIQAGANPAEVSFSSKACMLLELGLRVYNLRRSEHAGSGHDDFDRVLLQTCLESMFLS
QHLTAKLGNMEKGEKELLRVSIDRKVAEKMEPFFPATDDEQD
>Mature_121_residues
PRVQVYLKHNCIDEIHELVEEDIQAGANPAEVSFSSKACMLLELGLRVYNLRRSEHAGSGHDDFDRVLLQTCLESMFLSQ
HLTAKLGNMEKGEKELLRVSIDRKVAEKMEPFFPATDDEQD

Specific function: Transfer gene protein. Is involved in the conjugation process of bacterial cells for the exchange of plasmid DNA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the traM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010992
- InterPro:   IPR007925
- ProDom:   PD008204 [H]

Pfam domain/function: PF05261 Tra_M [H]

EC number: NA

Molecular weight: Translated: 13905; Mature: 13774

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRVQVYLKHNCIDEIHELVEEDIQAGANPAEVSFSSKACMLLELGLRVYNLRRSEHAGS
CCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
GHDDFDRVLLQTCLESMFLSQHLTAKLGNMEKGEKELLRVSIDRKVAEKMEPFFPATDDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
QD
CC
>Mature Secondary Structure 
PRVQVYLKHNCIDEIHELVEEDIQAGANPAEVSFSSKACMLLELGLRVYNLRRSEHAGS
CCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
GHDDFDRVLLQTCLESMFLSQHLTAKLGNMEKGEKELLRVSIDRKVAEKMEPFFPATDDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
QD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6298579; 7915817; 8736534 [H]