Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
---|---|
Accession | NC_009350 |
Length | 155,098 |
Click here to switch to the map view.
The map label for this gene is ascO [H]
Identifier: 145301460
GI number: 145301460
Start: 74593
End: 75054
Strand: Direct
Name: ascO [H]
Synonym: ASA_P5G077
Alternate gene names: 145301460
Gene position: 74593-75054 (Clockwise)
Preceding gene: 145301459
Following gene: 145301461
Centisome position: 48.09
GC content: 61.69
Gene sequence:
>462_bases ATGATTGGCCGCCTGCAACAAATAAAAGACCTGCGGCTGGATAGGGCCGAGCAGCAGCTCGCCGCCCAGCATGCTCGGGT GCAACTCGCCCGCGTCCGCCAGCGCGAAGCGGAGCAGGAGAGTCTCGACTATCGCCAGTGGCGCCAAGCCGAAGAAGAGC GGCTATTTGCCATCTGTCAGGCAGAGCAACTCGATCGCAAGGGGCTCAAGGCGTGGCAACAGCAAGTGTCGCTGCTGCGG GAGAAAGAGGCCCAGCTTGAACAAACTGCCGCCGAGCAGGCCGAGCGGGTCGCCGAAGAGCGCATCCGCTTGCAGGAGCG CCAGCAGGCGGTACACCGAGCCCGCCAGCAGCAACAGAAATTTGCCGAACTACACCGTCAGAAGCAGGCCTCACAGCAAG CCCTGCGTGACTACAACGAAGAGCAGGAACAGGAAGAGTTCCGCCAGCAGATCAGGATGTAA
Upstream 100 bases:
>100_bases CGATCGCCCGCATCGAGACTATTCGCCAGTGGCTCAGGCAAGGCACTCATGAACCCAGCTCACTGCCGGAAGCCCTCTCG ACCCTAGAGGCGCTGACCCG
Downstream 100 bases:
>100_bases CGAGTCATGAACCGAATCCTCCCGATACAGGGCACAGTGACAGCCCGGGGCGATACCCAGATGGCTGAAGCCAATCAATC GCAACAACAGCGTTTCGAGC
Product: AscO protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MIGRLQQIKDLRLDRAEQQLAAQHARVQLARVRQREAEQESLDYRQWRQAEEERLFAICQAEQLDRKGLKAWQQQVSLLR EKEAQLEQTAAEQAERVAEERIRLQERQQAVHRARQQQQKFAELHRQKQASQQALRDYNEEQEQEEFRQQIRM
Sequences:
>Translated_153_residues MIGRLQQIKDLRLDRAEQQLAAQHARVQLARVRQREAEQESLDYRQWRQAEEERLFAICQAEQLDRKGLKAWQQQVSLLR EKEAQLEQTAAEQAERVAEERIRLQERQQAVHRARQQQQKFAELHRQKQASQQALRDYNEEQEQEEFRQQIRM >Mature_153_residues MIGRLQQIKDLRLDRAEQQLAAQHARVQLARVRQREAEQESLDYRQWRQAEEERLFAICQAEQLDRKGLKAWQQQVSLLR EKEAQLEQTAAEQAERVAEERIRLQERQQAVHRARQQQQKFAELHRQKQASQQALRDYNEEQEQEEFRQQIRM
Specific function: Component of the yop secretion machinery [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the spaM family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009929 [H]
Pfam domain/function: PF07321 YscO [H]
EC number: NA
Molecular weight: Translated: 18556; Mature: 18556
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRLQQIKDLRLDRAEQQLAAQHARVQLARVRQREAEQESLDYRQWRQAEEERLFAICQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEQLDRKGLKAWQQQVSLLREKEAQLEQTAAEQAERVAEERIRLQERQQAVHRARQQQQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAELHRQKQASQQALRDYNEEQEQEEFRQQIRM HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC >Mature Secondary Structure MIGRLQQIKDLRLDRAEQQLAAQHARVQLARVRQREAEQESLDYRQWRQAEEERLFAICQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEQLDRKGLKAWQQQVSLLREKEAQLEQTAAEQAERVAEERIRLQERQQAVHRARQQQQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAELHRQKQASQQALRDYNEEQEQEEFRQQIRM HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8169210 [H]