Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is ascN [H]
Identifier: 145301459
GI number: 145301459
Start: 73259
End: 74596
Strand: Direct
Name: ascN [H]
Synonym: ASA_P5G076
Alternate gene names: 145301459
Gene position: 73259-74596 (Clockwise)
Preceding gene: 145301426
Following gene: 145301460
Centisome position: 47.23
GC content: 64.87
Gene sequence:
>1338_bases ATGGCGCAGATTGTTATGACCCTCTCCCTCGACCACATCCCCGACCAGCTTCGTCACGCCATCGACGAGTGCCGCCTGAT CCAGATCCGTGGCCGGGTCACCCAGGTGACCGGCACCCTGCTCAAGGCGGTCGTCCCCGGGGTGCGGATCGGCGAGCTCT GCCATCTGCGCAACCCGGACAACACCCTCTCCCTGCAGGCAGAGGTGATCGGCTTTGCCCAGCATCAAGCGCTGCTCACC CCCCTTGGCGAAATGTTCGGCATCTCCTCCAACACCGAGGTGAGCCCGACCGGTGCCATGCATCAGGTCGGGGTCGGCGA ACATCTGCTCGGCCAGGTGCTCGATGGCCTCGGCAACCCCTTTGGCGGCGGCCATCTGCCGGAGCCCGAGGCTTGGTACC CGGTCTATCGGGATGCGCCCGCTCCCATGAGCCGCAAGCGCATCGCCGAGCCCATTTCACTCGGTATTCGCGCCATCGAC GGCCTGCTCACCTGCGGTGAGGGGCAACGGATGGGGATCTTCGCGGCCGCCGGTGGTGGCAAGAGCACCCTGCTGGCGTC GCTTATTCGCAGCGCCGAGGTAGATGTCACCGTGCTGGCGCTGATCGGTGAACGGGGCCGCGAGGTGCGCGAATTTATCG AAGCGGATCTGGGGGAAGAGGGGCTCAAGAAGGCTGTGCTGGTGGTGGCTACTTCGGATCGCCCCGCCATGGAGCGGGCC AAGGCGGGCTTTGTCGCCACCTCCATCGCCGAGTATTTCCGCGATCAAGGCAAGCGGGTACTGCTGCTGATGGACTCCGT CACCCGCTTTGCCCGTGCCCAGCGGGAGATTGGTCTGGCCGCTGGCGAGCCACCAACCCGACGGGGCTATCCGCCGTCGG TGTTTGCCGCCCTGCCCCGCCTGATGGAGCGGGCCGGTCAGTCAGACAAGGGCTCCATCACTGCCCTCTATACCGTGCTG GTAGAGGGGGATGACATGACAGAGCCGGTCGCTGACGAGACCCGCTCCATCCTCGATGGCCACATCATCCTGTCGCGCAA ACTGGCGGCGGCCAACCACTACCCGGCCATCGACGTGCTGCGCTCCGCCAGCCGGGTGATGAACCAGATCATCGAGCCCG AGCATCAGGCTCAGGCAGGTCGACTGCGCAGCTGGCTGGCGAAATATGAAGAGGTGGAGCTGTTGCTACAGATCGGCGAA TACCAGAAAGGGCAGGACAAGGTAGCCGATGAGGCGATCGCCCGCATCGAGACTATTCGCCAGTGGCTCAGGCAAGGCAC TCATGAACCCAGCTCACTGCCGGAAGCCCTCTCGACCCTAGAGGCGCTGACCCGATGA
Upstream 100 bases:
>100_bases GCCGTGAATTTTTAGCCCGCCCCCAACGGTTTTCTAAAAAGTCCCGACTCGCGCTGAAATCCCCGTAGCCCCCCATCCCC TATAGTGGCCGCCAGTTTCA
Downstream 100 bases:
>100_bases TTGGCCGCCTGCAACAAATAAAAGACCTGCGGCTGGATAGGGCCGAGCAGCAGCTCGCCGCCCAGCATGCTCGGGTGCAA CTCGCCCGCGTCCGCCAGCG
Product: type III secretion system ATPase
Products: NA
Alternate protein names: Yop proteins secretion ATPase [H]
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MAQIVMTLSLDHIPDQLRHAIDECRLIQIRGRVTQVTGTLLKAVVPGVRIGELCHLRNPDNTLSLQAEVIGFAQHQALLT PLGEMFGISSNTEVSPTGAMHQVGVGEHLLGQVLDGLGNPFGGGHLPEPEAWYPVYRDAPAPMSRKRIAEPISLGIRAID GLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIEADLGEEGLKKAVLVVATSDRPAMERA KAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSDKGSITALYTVL VEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIIEPEHQAQAGRLRSWLAKYEEVELLLQIGE YQKGQDKVADEAIARIETIRQWLRQGTHEPSSLPEALSTLEALTR
Sequences:
>Translated_445_residues MAQIVMTLSLDHIPDQLRHAIDECRLIQIRGRVTQVTGTLLKAVVPGVRIGELCHLRNPDNTLSLQAEVIGFAQHQALLT PLGEMFGISSNTEVSPTGAMHQVGVGEHLLGQVLDGLGNPFGGGHLPEPEAWYPVYRDAPAPMSRKRIAEPISLGIRAID GLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIEADLGEEGLKKAVLVVATSDRPAMERA KAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSDKGSITALYTVL VEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIIEPEHQAQAGRLRSWLAKYEEVELLLQIGE YQKGQDKVADEAIARIETIRQWLRQGTHEPSSLPEALSTLEALTR >Mature_444_residues AQIVMTLSLDHIPDQLRHAIDECRLIQIRGRVTQVTGTLLKAVVPGVRIGELCHLRNPDNTLSLQAEVIGFAQHQALLTP LGEMFGISSNTEVSPTGAMHQVGVGEHLLGQVLDGLGNPFGGGHLPEPEAWYPVYRDAPAPMSRKRIAEPISLGIRAIDG LLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIEADLGEEGLKKAVLVVATSDRPAMERAK AGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSDKGSITALYTVLV EGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIIEPEHQAQAGRLRSWLAKYEEVELLLQIGEY QKGQDKVADEAIARIETIRQWLRQGTHEPSSLPEALSTLEALTR
Specific function: Is a component of the Yop secretion machinery using ATP, and it is either the energizer of this machinery, or part of it [H]
COG id: COG1157
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase
Gene ontology:
Cell location: Cytoplasm. Note=But connected to the inner membrane possibly through LcrD (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATPase alpha/beta chains family [H]
Homologues:
Organism=Homo sapiens, GI32189394, Length=353, Percent_Identity=30.8781869688385, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI50345984, Length=366, Percent_Identity=30.0546448087432, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI4757810, Length=366, Percent_Identity=30.0546448087432, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI19913428, Length=415, Percent_Identity=28.6746987951807, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI19913426, Length=417, Percent_Identity=27.3381294964029, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI19913424, Length=248, Percent_Identity=32.6612903225806, Blast_Score=120, Evalue=3e-27, Organism=Escherichia coli, GI1788251, Length=440, Percent_Identity=43.1818181818182, Blast_Score=317, Evalue=1e-87, Organism=Escherichia coli, GI1790170, Length=407, Percent_Identity=28.992628992629, Blast_Score=162, Evalue=6e-41, Organism=Escherichia coli, GI1790172, Length=383, Percent_Identity=27.6762402088773, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI1790217, Length=223, Percent_Identity=30.4932735426009, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI25144756, Length=354, Percent_Identity=30.225988700565, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI71988080, Length=363, Percent_Identity=28.6501377410468, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI71988063, Length=363, Percent_Identity=28.6501377410468, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17510931, Length=364, Percent_Identity=27.7472527472527, Blast_Score=131, Evalue=9e-31, Organism=Caenorhabditis elegans, GI17570191, Length=412, Percent_Identity=26.4563106796117, Blast_Score=130, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17565854, Length=348, Percent_Identity=30.7471264367816, Blast_Score=128, Evalue=6e-30, Organism=Caenorhabditis elegans, GI71988074, Length=340, Percent_Identity=27.0588235294118, Blast_Score=116, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6319370, Length=351, Percent_Identity=31.9088319088319, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6322581, Length=419, Percent_Identity=28.8782816229117, Blast_Score=153, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6319603, Length=442, Percent_Identity=29.8642533936652, Blast_Score=143, Evalue=7e-35, Organism=Saccharomyces cerevisiae, GI6320016, Length=223, Percent_Identity=33.6322869955157, Blast_Score=104, Evalue=3e-23, Organism=Drosophila melanogaster, GI24638766, Length=353, Percent_Identity=30.8781869688385, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI28574560, Length=353, Percent_Identity=30.3116147308782, Blast_Score=145, Evalue=6e-35, Organism=Drosophila melanogaster, GI24658560, Length=366, Percent_Identity=29.2349726775956, Blast_Score=141, Evalue=8e-34, Organism=Drosophila melanogaster, GI281361666, Length=416, Percent_Identity=27.6442307692308, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24646341, Length=416, Percent_Identity=27.6442307692308, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI17136796, Length=416, Percent_Identity=27.6442307692308, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24583992, Length=316, Percent_Identity=30.0632911392405, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24583988, Length=282, Percent_Identity=30.4964539007092, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24583986, Length=282, Percent_Identity=30.4964539007092, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI24583984, Length=282, Percent_Identity=30.4964539007092, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI20129479, Length=233, Percent_Identity=32.1888412017167, Blast_Score=118, Evalue=6e-27,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020003 - InterPro: IPR000194 - InterPro: IPR003593 - InterPro: IPR004100 - InterPro: IPR005714 - InterPro: IPR013380 [H]
Pfam domain/function: PF00006 ATP-synt_ab; PF02874 ATP-synt_ab_N [H]
EC number: =3.6.3.14 [H]
Molecular weight: Translated: 48381; Mature: 48250
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQIVMTLSLDHIPDQLRHAIDECRLIQIRGRVTQVTGTLLKAVVPGVRIGELCHLRNPD CCEEEEEEEHHHCHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHCCCCCC NTLSLQAEVIGFAQHQALLTPLGEMFGISSNTEVSPTGAMHQVGVGEHLLGQVLDGLGNP CCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCC FGGGHLPEPEAWYPVYRDAPAPMSRKRIAEPISLGIRAIDGLLTCGEGQRMGIFAAAGGG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC KSTLLASLIRSAEVDVTVLALIGERGREVREFIEADLGEEGLKKAVLVVATSDRPAMERA HHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHCEEEEEECCCCHHHHHH KAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPR HHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH LMERAGQSDKGSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVL HHHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHH RSASRVMNQIIEPEHQAQAGRLRSWLAKYEEVELLLQIGEYQKGQDKVADEAIARIETIR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QWLRQGTHEPSSLPEALSTLEALTR HHHHCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure AQIVMTLSLDHIPDQLRHAIDECRLIQIRGRVTQVTGTLLKAVVPGVRIGELCHLRNPD CEEEEEEEHHHCHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHCCCCCHHHHHCCCCCC NTLSLQAEVIGFAQHQALLTPLGEMFGISSNTEVSPTGAMHQVGVGEHLLGQVLDGLGNP CCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCC FGGGHLPEPEAWYPVYRDAPAPMSRKRIAEPISLGIRAIDGLLTCGEGQRMGIFAAAGGG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC KSTLLASLIRSAEVDVTVLALIGERGREVREFIEADLGEEGLKKAVLVVATSDRPAMERA HHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHCEEEEEECCCCHHHHHH KAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPR HHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH LMERAGQSDKGSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVL HHHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHH RSASRVMNQIIEPEHQAQAGRLRSWLAKYEEVELLLQIGEYQKGQDKVADEAIARIETIR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QWLRQGTHEPSSLPEALSTLEALTR HHHHCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8132449; 2160939 [H]