Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is ascX [H]
Identifier: 145301455
GI number: 145301455
Start: 71214
End: 71579
Strand: Reverse
Name: ascX [H]
Synonym: ASA_P5G072
Alternate gene names: 145301455
Gene position: 71579-71214 (Counterclockwise)
Preceding gene: 145301456
Following gene: 145301454
Centisome position: 46.15
GC content: 62.84
Gene sequence:
>366_bases ATGAGCCGGATCACTGCCGCGCATATCGGTATCGAGCAGCTCAGCGCCATCTCCCTCGACGATCAGGAGCGCAGCCTGCC GGGGCGTTATGCCCTGTTGCCCGATGGCCAGTCCATCGAACCCCATATCAGCCGCCTCTACCCCGAGCGGCTGGCGGATC GGGTGCTGCTCGATTTCGCCACCCCGGATCGCGGCTTTCACGACTTGCTGCGACCGGTCGATTTCAATCAGGCGATGCAG GGGCTGCGCAGTGTGCTGGCAGAGGGGCAGAGCCCCGAATTGCGAGCGGCCGCCGCGCTGCTCGAACAAATGCACGCCGA TGAACAACTGATGCAGATGACCCTTCATCTGCTGCACAAGGTATGA
Upstream 100 bases:
>100_bases TGATCCTCTTCGTCTCCCTGGATGAGCGGGCCGTGACTCTGCCCCAGCTCCATCAGGCCGTGACCACCCTGACCCGGTTG CAGCGAGAGGTGCTGGCGTC
Downstream 100 bases:
>100_bases CCATGGTGCTTACGTCACAGCAGCAGGATGCGCTGCTGCTCACCGGCTGGTTGCAACTGCAATATGGCCACCCTGACAAG GCGAGCGTGCTGCTGGCCGC
Product: AscX protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSRITAAHIGIEQLSAISLDDQERSLPGRYALLPDGQSIEPHISRLYPERLADRVLLDFATPDRGFHDLLRPVDFNQAMQ GLRSVLAEGQSPELRAAAALLEQMHADEQLMQMTLHLLHKV
Sequences:
>Translated_121_residues MSRITAAHIGIEQLSAISLDDQERSLPGRYALLPDGQSIEPHISRLYPERLADRVLLDFATPDRGFHDLLRPVDFNQAMQ GLRSVLAEGQSPELRAAAALLEQMHADEQLMQMTLHLLHKV >Mature_120_residues SRITAAHIGIEQLSAISLDDQERSLPGRYALLPDGQSIEPHISRLYPERLADRVLLDFATPDRGFHDLLRPVDFNQAMQG LRSVLAEGQSPELRAAAALLEQMHADEQLMQMTLHLLHKV
Specific function: Required for Yop secretion [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted. Note=Secreted via the type III secretion system [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012672 [H]
Pfam domain/function: PF09474 Type_III_YscX [H]
EC number: NA
Molecular weight: Translated: 13576; Mature: 13445
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRITAAHIGIEQLSAISLDDQERSLPGRYALLPDGQSIEPHISRLYPERLADRVLLDFA CCCCHHHHHHHHHHHHCCCCCHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC TPDRGFHDLLRPVDFNQAMQGLRSVLAEGQSPELRAAAALLEQMHADEQLMQMTLHLLHK CCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC V C >Mature Secondary Structure SRITAAHIGIEQLSAISLDDQERSLPGRYALLPDGQSIEPHISRLYPERLADRVLLDFA CCCHHHHHHHHHHHHCCCCCHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC TPDRGFHDLLRPVDFNQAMQGLRSVLAEGQSPELRAAAALLEQMHADEQLMQMTLHLLHK CCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11402007 [H]