Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is acrV [H]
Identifier: 145301450
GI number: 145301450
Start: 66898
End: 67983
Strand: Reverse
Name: acrV [H]
Synonym: ASA_P5G067
Alternate gene names: 145301450
Gene position: 67983-66898 (Counterclockwise)
Preceding gene: 145301451
Following gene: 145301449
Centisome position: 43.83
GC content: 52.21
Gene sequence:
>1086_bases ATGAGCACAATCCCTGACTACAACACTAACCCCGGCGCGTTCGTCGGCTGGCTTGATGTGCAAGCACTGAACACATTGCC GGGCAATAAAAATCCCAAGTTGACCGAACTGGTCGAGCTGCTCAAGGGCAAGATCACCATCAGTGCTGACTCATCGACTG CGCTGAGCAAGGAGCAGCTGGAGAAGTTGCTGGCTGCCTATCTGACGGATCCTGCCTCGATCAACGGGGGCTGGGCGATG GGCCAGTTCAAGGGAGGTCAAGATGCCGCCATTGCCGCCATCAAGGGGGTGATCGAGCGGGGAGCAAAACAAACCCCGCC AGTCACCCACTGGACCATCCCTGAATTTATGCTGCTCTCCCTCAGTGCGCTGACCATGGAACGTACCGATGACGATCTCA TCACGACCTTTACCGGGGTGATGATGTTTCAGGACAATCAGCGTAAAGGGTTGCGGGATGAGCTGGCAGAGATGACCGCT GAGCTGAAGATCTACGGGGTGATCCAGTCCGAGATCAACCAGGTGCTCTCTGCGGCGTCCAACCAAACCTTCAAAACCAA TTTCAATCTGATGGATTACAAGCTCTATGGCTATGAGTCTCTGGCCAAATTTATGGAAGGGGGCGAGTTCAAGCTGTTGT CAAAAATGTTTAGCGATGAGCAGGTGACAAAAGCACAGCAAGATTTCACCAATGCTAAAAATGAGCTGGAAAACGTCACG TCGACCAGCCTAAACCCCAAAATCCAGGCGGAAGCTAAGACCGATTATGAGCGTAAAAAAGCCATTTTTGAGGAGATCGT AGAGACGCAGATCATCACCCTTAAAACGTTCCTGGAAAGTGACCTGAAGAAGAGCGGCGCCATGAGTGGCATAGAAGCCG AGTACAAATATGACAAAGACAACAACAAGCTTGGCAACTTCTCCACTAGTGTGAGCGACCGTTCTCGCCCGCTCAACGAT CTGGTCAGTGAAAAGACCGCCCGCCTCAACGACGTCAGTTCGCGCTACAACGCTGCCATCGAGGCACTCAACCGCTTTAT CCAGAAATACGACAGCATCATGCGCGACATTCTTGGCGCAATTTGA
Upstream 100 bases:
>100_bases GATCCAGCGCAGACAGGCGTTACTACCGGCACAGCCGGGAGAGGGCCGCAAAAGTCGCCGTCCCACCATTATGCGCGGAC TGATGATTTAAGGAGTCGTG
Downstream 100 bases:
>100_bases GGAGAGATCATGCAGACCGACACCACCCTGACCCCGGAATATGAAGCAGAGCTGGAGGCCTTTATGGCTGACGGTGGTAC CCTGGCTATGCTGCAGGATA
Product: AcrV
Products: NA
Alternate protein names: Low calcium response locus protein V [H]
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSTIPDYNTNPGAFVGWLDVQALNTLPGNKNPKLTELVELLKGKITISADSSTALSKEQLEKLLAAYLTDPASINGGWAM GQFKGGQDAAIAAIKGVIERGAKQTPPVTHWTIPEFMLLSLSALTMERTDDDLITTFTGVMMFQDNQRKGLRDELAEMTA ELKIYGVIQSEINQVLSAASNQTFKTNFNLMDYKLYGYESLAKFMEGGEFKLLSKMFSDEQVTKAQQDFTNAKNELENVT STSLNPKIQAEAKTDYERKKAIFEEIVETQIITLKTFLESDLKKSGAMSGIEAEYKYDKDNNKLGNFSTSVSDRSRPLND LVSEKTARLNDVSSRYNAAIEALNRFIQKYDSIMRDILGAI
Sequences:
>Translated_361_residues MSTIPDYNTNPGAFVGWLDVQALNTLPGNKNPKLTELVELLKGKITISADSSTALSKEQLEKLLAAYLTDPASINGGWAM GQFKGGQDAAIAAIKGVIERGAKQTPPVTHWTIPEFMLLSLSALTMERTDDDLITTFTGVMMFQDNQRKGLRDELAEMTA ELKIYGVIQSEINQVLSAASNQTFKTNFNLMDYKLYGYESLAKFMEGGEFKLLSKMFSDEQVTKAQQDFTNAKNELENVT STSLNPKIQAEAKTDYERKKAIFEEIVETQIITLKTFLESDLKKSGAMSGIEAEYKYDKDNNKLGNFSTSVSDRSRPLND LVSEKTARLNDVSSRYNAAIEALNRFIQKYDSIMRDILGAI >Mature_360_residues STIPDYNTNPGAFVGWLDVQALNTLPGNKNPKLTELVELLKGKITISADSSTALSKEQLEKLLAAYLTDPASINGGWAMG QFKGGQDAAIAAIKGVIERGAKQTPPVTHWTIPEFMLLSLSALTMERTDDDLITTFTGVMMFQDNQRKGLRDELAEMTAE LKIYGVIQSEINQVLSAASNQTFKTNFNLMDYKLYGYESLAKFMEGGEFKLLSKMFSDEQVTKAQQDFTNAKNELENVTS TSLNPKIQAEAKTDYERKKAIFEEIVETQIITLKTFLESDLKKSGAMSGIEAEYKYDKDNNKLGNFSTSVSDRSRPLNDL VSEKTARLNDVSSRYNAAIEALNRFIQKYDSIMRDILGAI
Specific function: Possibly involved in calcium regulation of YOP expression, which includes the export process [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005413 [H]
Pfam domain/function: PF04792 LcrV [H]
EC number: NA
Molecular weight: Translated: 40165; Mature: 40034
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIPDYNTNPGAFVGWLDVQALNTLPGNKNPKLTELVELLKGKITISADSSTALSKEQL CCCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHH EKLLAAYLTDPASINGGWAMGQFKGGQDAAIAAIKGVIERGAKQTPPVTHWTIPEFMLLS HHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH LSALTMERTDDDLITTFTGVMMFQDNQRKGLRDELAEMTAELKIYGVIQSEINQVLSAAS HHHHHHHCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NQTFKTNFNLMDYKLYGYESLAKFMEGGEFKLLSKMFSDEQVTKAQQDFTNAKNELENVT CCCEEECCCEEEEEECCHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH STSLNPKIQAEAKTDYERKKAIFEEIVETQIITLKTFLESDLKKSGAMSGIEAEYKYDKD HCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCC NNKLGNFSTSVSDRSRPLNDLVSEKTARLNDVSSRYNAAIEALNRFIQKYDSIMRDILGA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC I C >Mature Secondary Structure STIPDYNTNPGAFVGWLDVQALNTLPGNKNPKLTELVELLKGKITISADSSTALSKEQL CCCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCHHHHHHHHHCCEEEECCCCHHHHHHHH EKLLAAYLTDPASINGGWAMGQFKGGQDAAIAAIKGVIERGAKQTPPVTHWTIPEFMLLS HHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH LSALTMERTDDDLITTFTGVMMFQDNQRKGLRDELAEMTAELKIYGVIQSEINQVLSAAS HHHHHHHCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NQTFKTNFNLMDYKLYGYESLAKFMEGGEFKLLSKMFSDEQVTKAQQDFTNAKNELENVT CCCEEECCCEEEEEECCHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH STSLNPKIQAEAKTDYERKKAIFEEIVETQIITLKTFLESDLKKSGAMSGIEAEYKYDKD HCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCC NNKLGNFSTSVSDRSRPLNDLVSEKTARLNDVSSRYNAAIEALNRFIQKYDSIMRDILGA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2477361; 9746557; 9748454; 11586360 [H]