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The map label for this gene is aopB [H]

Identifier: 145301448

GI number: 145301448

Start: 65211

End: 66404

Strand: Reverse

Name: aopB [H]

Synonym: ASA_P5G065

Alternate gene names: 145301448

Gene position: 66404-65211 (Counterclockwise)

Preceding gene: 145301449

Following gene: 145301447

Centisome position: 42.81

GC content: 56.2

Gene sequence:

>1194_bases
ATGAACCCGATCAGCAATGAAAGACAGGTTTCCCCGCTGGGAAACACAGGTGACGTCGCGGGCCTCGTACCCGTTACCCA
GCCTCGCAGTGAAACACGGCTCGATGCCGCAACGGTGCAAGTTACCGGTCAGGCTAGCAAGTCAGGGGTCTCGCTGAACG
CACCTCTGATGGTAAGCAATAGCCAGGTCAGTGCACAGCAGCTTGGTGAAATCGGCAAGTTGGTGACCTCGGTGAACGAG
AACACCCGCTTGATTCTGCCGCACACCACCGGGTTGGTGACCGCAGCCTTTACCTCGCCCGAAGCGTTCGAGATTGAGCT
GGGCAAGCTCACCAGTGATCTGGAGAAGACCCAGACCAAGCTGAAGCTTGATGATATCCGGCAAGCTCGTACTCTGAATG
AGAAGAAGATCGGCGAGAACCAGGCAAAGATCAAAGAGGCAGAAGATAGTGCTCAGGAGGCCAAGAAAGCCGGTATCTTT
AGCAAAGTTTTCGGCTGGCTCAGTGCCATTGCCTCGCTGGTGATCGGCGCTATCATGGTGGCAACCGGGATTGGTGCTGT
CGCCGGCGCCCTGATGATCGCTTCCGGCGTGGTCGGAGTGGTCAATATGGCCGTGCAGCAGGCTGCAGCGGATGGCCTTA
TCTCCAAGGAGGTAATGGAGAAGCTGGGGCCCGCCCTGATGGGGATAGAGATTGCGTTTGCAGTGATGTCGGCCATTGCC
AGCTTCGGCCCGTTGATTGGTCGTGCGATGACTAGCCTTGCTAGCAAAGTGGGTGGTAAGGTCGCAGACGTCGCCGCCAA
GATTGCTGCCAAAGCGGGTGAAATGACTGCCAAAGTGGGTGAAATGGCTGCCAAGTTTGGCGCCAAAGCGACCGTCGAGG
CGGTGAAGCTAACAGGTCAAACAGCAAAAATCGCACAAGTGGTCACTCAGGCCACTGATATCATCATTGATGTGAGCAGT
GGCGCGGCCAAATCGGCCCAGTCCGCGAAAGAGTCCGAATCGCTGAGTGCTCAGGCTGATCTTGCCATGAGCAAGAGTGA
GATGACCGAACTGCAAGGGGTCATCGACAAGCTCAAGGAGGCGATAGCCCAGATGATCGAGGCGTTCCAGCAGACCATGG
AGATGATCTTTCAGTTGATCAATGCCAAGGGCGACATGATGAACAACTTGGCCCGTAGACCGGCCGCTATCTAA

Upstream 100 bases:

>100_bases
TCGGCCCGACTGCTGGCGGACACAGATCCCCAGCAGGCAGACCTGGCGGCAAGCGCCAAGGTCATGTTGGAAGCCATCGC
AATCAGAAGGGATCTGCAAG

Downstream 100 bases:

>100_bases
GGAGTACCGACCATGATTAACAGTGATTATACAAATGGCGTGACCCGTAACGCTCCGCTGACCGAGTTAGATACCGATGA
GGCGCAGCAGGTTCGCAATG

Product: AopB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNPISNERQVSPLGNTGDVAGLVPVTQPRSETRLDAATVQVTGQASKSGVSLNAPLMVSNSQVSAQQLGEIGKLVTSVNE
NTRLILPHTTGLVTAAFTSPEAFEIELGKLTSDLEKTQTKLKLDDIRQARTLNEKKIGENQAKIKEAEDSAQEAKKAGIF
SKVFGWLSAIASLVIGAIMVATGIGAVAGALMIASGVVGVVNMAVQQAAADGLISKEVMEKLGPALMGIEIAFAVMSAIA
SFGPLIGRAMTSLASKVGGKVADVAAKIAAKAGEMTAKVGEMAAKFGAKATVEAVKLTGQTAKIAQVVTQATDIIIDVSS
GAAKSAQSAKESESLSAQADLAMSKSEMTELQGVIDKLKEAIAQMIEAFQQTMEMIFQLINAKGDMMNNLARRPAAI

Sequences:

>Translated_397_residues
MNPISNERQVSPLGNTGDVAGLVPVTQPRSETRLDAATVQVTGQASKSGVSLNAPLMVSNSQVSAQQLGEIGKLVTSVNE
NTRLILPHTTGLVTAAFTSPEAFEIELGKLTSDLEKTQTKLKLDDIRQARTLNEKKIGENQAKIKEAEDSAQEAKKAGIF
SKVFGWLSAIASLVIGAIMVATGIGAVAGALMIASGVVGVVNMAVQQAAADGLISKEVMEKLGPALMGIEIAFAVMSAIA
SFGPLIGRAMTSLASKVGGKVADVAAKIAAKAGEMTAKVGEMAAKFGAKATVEAVKLTGQTAKIAQVVTQATDIIIDVSS
GAAKSAQSAKESESLSAQADLAMSKSEMTELQGVIDKLKEAIAQMIEAFQQTMEMIFQLINAKGDMMNNLARRPAAI
>Mature_397_residues
MNPISNERQVSPLGNTGDVAGLVPVTQPRSETRLDAATVQVTGQASKSGVSLNAPLMVSNSQVSAQQLGEIGKLVTSVNE
NTRLILPHTTGLVTAAFTSPEAFEIELGKLTSDLEKTQTKLKLDDIRQARTLNEKKIGENQAKIKEAEDSAQEAKKAGIF
SKVFGWLSAIASLVIGAIMVATGIGAVAGALMIASGVVGVVNMAVQQAAADGLISKEVMEKLGPALMGIEIAFAVMSAIA
SFGPLIGRAMTSLASKVGGKVADVAAKIAAKAGEMTAKVGEMAAKFGAKATVEAVKLTGQTAKIAQVVTQATDIIIDVSS
GAAKSAQSAKESESLSAQADLAMSKSEMTELQGVIDKLKEAIAQMIEAFQQTMEMIFQLINAKGDMMNNLARRPAAI

Specific function: Plays a role in virulence [H]

COG id: COG5613

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Shigella invasion plasmid ipaB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006972 [H]

Pfam domain/function: PF04888 SseC [H]

EC number: NA

Molecular weight: Translated: 41125; Mature: 41125

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPISNERQVSPLGNTGDVAGLVPVTQPRSETRLDAATVQVTGQASKSGVSLNAPLMVSN
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHEEEEEECCCCCCCCEECCCEEECC
SQVSAQQLGEIGKLVTSVNENTRLILPHTTGLVTAAFTSPEAFEIELGKLTSDLEKTQTK
CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHH
LKLDDIRQARTLNEKKIGENQAKIKEAEDSAQEAKKAGIFSKVFGWLSAIASLVIGAIMV
HHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGIGAVAGALMIASGVVGVVNMAVQQAAADGLISKEVMEKLGPALMGIEIAFAVMSAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH
SFGPLIGRAMTSLASKVGGKVADVAAKIAAKAGEMTAKVGEMAAKFGAKATVEAVKLTGQ
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
TAKIAQVVTQATDIIIDVSSGAAKSAQSAKESESLSAQADLAMSKSEMTELQGVIDKLKE
HHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAQMIEAFQQTMEMIFQLINAKGDMMNNLARRPAAI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MNPISNERQVSPLGNTGDVAGLVPVTQPRSETRLDAATVQVTGQASKSGVSLNAPLMVSN
CCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHEEEEEECCCCCCCCEECCCEEECC
SQVSAQQLGEIGKLVTSVNENTRLILPHTTGLVTAAFTSPEAFEIELGKLTSDLEKTQTK
CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHH
LKLDDIRQARTLNEKKIGENQAKIKEAEDSAQEAKKAGIFSKVFGWLSAIASLVIGAIMV
HHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATGIGAVAGALMIASGVVGVVNMAVQQAAADGLISKEVMEKLGPALMGIEIAFAVMSAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH
SFGPLIGRAMTSLASKVGGKVADVAAKIAAKAGEMTAKVGEMAAKFGAKATVEAVKLTGQ
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
TAKIAQVVTQATDIIIDVSSGAAKSAQSAKESESLSAQADLAMSKSEMTELQGVIDKLKE
HHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAQMIEAFQQTMEMIFQLINAKGDMMNNLARRPAAI
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8418066 [H]