Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
---|---|
Accession | NC_009350 |
Length | 155,098 |
Click here to switch to the map view.
The map label for this gene is exsB
Identifier: 145301444
GI number: 145301444
Start: 63089
End: 63490
Strand: Reverse
Name: exsB
Synonym: ASA_P5G061
Alternate gene names: NA
Gene position: 63490-63089 (Counterclockwise)
Preceding gene: 145301445
Following gene: 145301443
Centisome position: 40.94
GC content: 52.24
Gene sequence:
>402_bases ATGAGAGGTCTGCTGGCACTGATGTTGTCGGCGATGTTGGCCGGTTGTGTTACTACCCCGGAGCTGAAGCCATCGCAACA GCAACTCAAGGGAGAGGTGCATTTCCCGCAAGCCTTGCCACGTTCGGCGACGGTGGAGGTGGCAGTGCTCAGCGTGATCG GGGGGCGCCCATTGCAAGTGGCTGCCACCCGTTATGAGGTGACCATGCTGCCATTGTTGTTTGATCTACGTTTGACCCCT CTGCAACTGGCGGAAGGGGAGATCTATCTGCGTGCCCGCTTGCGATTTATGGATGGTACCGCGGTACAGGCTATGAGTCA GCAGAAAGTTTTTAAGATTTTTAATGACAAAAAAATGGTTATTCAATTGCAGCCAAAAGCTTGTTATCCACAATGTCAGT AG
Upstream 100 bases:
>100_bases TGCGACGCTCCATTGTCCTCAATCAGGTCCAGGAACTAGCGCTGCAGCGACTGCAACTGGGTGAGCACACCCCGCTGAGT GAACGGCGGATTCGGGTGTT
Downstream 100 bases:
>100_bases AGATTGTGTTTAAATAAAAAGCCTTAAATTAATCATTTATTAATTTGTCAGTTAAAATTGAAGGTTTCTTTTTGTAACGA AGTATCTTTTTCTGTAATCA
Product: ExsB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MRGLLALMLSAMLAGCVTTPELKPSQQQLKGEVHFPQALPRSATVEVAVLSVIGGRPLQVAATRYEVTMLPLLFDLRLTP LQLAEGEIYLRARLRFMDGTAVQAMSQQKVFKIFNDKKMVIQLQPKACYPQCQ
Sequences:
>Translated_133_residues MRGLLALMLSAMLAGCVTTPELKPSQQQLKGEVHFPQALPRSATVEVAVLSVIGGRPLQVAATRYEVTMLPLLFDLRLTP LQLAEGEIYLRARLRFMDGTAVQAMSQQKVFKIFNDKKMVIQLQPKACYPQCQ >Mature_133_residues MRGLLALMLSAMLAGCVTTPELKPSQQQLKGEVHFPQALPRSATVEVAVLSVIGGRPLQVAATRYEVTMLPLLFDLRLTP LQLAEGEIYLRARLRFMDGTAVQAMSQQKVFKIFNDKKMVIQLQPKACYPQCQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14802; Mature: 14802
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLLALMLSAMLAGCVTTPELKPSQQQLKGEVHFPQALPRSATVEVAVLSVIGGRPLQV CCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHEEEEEHHCCCCEEE AATRYEVTMLPLLFDLRLTPLQLAEGEIYLRARLRFMDGTAVQAMSQQKVFKIFNDKKMV EEEEEEEEEEHHHHHCCCCCEEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEE IQLQPKACYPQCQ EEECCCCCCCCCC >Mature Secondary Structure MRGLLALMLSAMLAGCVTTPELKPSQQQLKGEVHFPQALPRSATVEVAVLSVIGGRPLQV CCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHEEEEEHHCCCCEEE AATRYEVTMLPLLFDLRLTPLQLAEGEIYLRARLRFMDGTAVQAMSQQKVFKIFNDKKMV EEEEEEEEEEHHHHHCCCCCEEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEE IQLQPKACYPQCQ EEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA