Click here to switch to the map view.

The map label for this gene is exsD

Identifier: 145301442

GI number: 145301442

Start: 60993

End: 61808

Strand: Reverse

Name: exsD

Synonym: ASA_P5G059

Alternate gene names: NA

Gene position: 61808-60993 (Counterclockwise)

Preceding gene: 145301443

Following gene: 145301441

Centisome position: 39.85

GC content: 60.05

Gene sequence:

>816_bases
ATGAGTCAGCAAGATCACCATTCACCTAACCAGGGCCTGTTTGCAGGTCGTCGGGTTACCGTTGTCCAGCCAGATACCCT
GAGTCGGGATCGTCTGGTCGGCCAGCTGTCCGTGCTCCGTTATCAGGATGCCGGCGTGATCACTTCGCAGCAGATGGCCC
TGTTGCAACGACTGTTGCCAAGAACCAGACGGGAGAGCCTGTTGGGCTCCATCTGGTTTCAGCGCCGTCTCGATGCCGCG
CTGGCCGTCTCGCGCGAGGAGCTGCAACAGATCTTGCGTCTGGCAGGCAGCGAGCATTGTGACTGGGTGCAGCAGCTGGG
AGACCGCATAAATCTGGCGGATCGTCCCTTGCTGTGGCACTGGGTGCTCTATCCCTTGCACCGCTGGTGGGTTCAGCGTC
TTGAACCACTTTACGGCGCCTGGCTTAACGAACTGGAGCAGTTGCAGGTGATGCACCGCCAGCTCAATGCTCGGGCTGTG
TTCTGGCAGACAGTGGTCGATGTACCGGCGGATCTGGAGAGCCGGATCGCCGATCAGCTTGAACAGTTGAACCAGCGTGA
GCAGGAGCTCACCCGGCTGCAGAGTGATTGTGAGACACGTCTCCAGCTGGCTTGGCCTGCCTGGTATGCACAAACAAGCA
AGGAGGGGGACCTGGCTCATCTGATGCCGGTACCGCTTGAGCTCGGTACATTCTGGCATGCCCTACAGGCTCTGCCCCAT
CAGGATGAGGCAGCCCTAACCCTGCATGAGTGGCTGGCCGGTCGGGGCATTGCCTTGGGTCAGGATCACTTCTACTGGCA
GCCTCCTGCTCCCTAG

Upstream 100 bases:

>100_bases
GACGTTTTTTATAAGCCACGGAGCGAGGCAATGGATAGAATAGCCAGCACATCGAAACATCATTCCATTATTGCCCGCAG
CAAGATGAGCAAGGCATAGC

Downstream 100 bases:

>100_bases
ATAGCCCGAGGAACTATGCAAACGCTACTGAATCGATTGGCCGCAAACCTTGGTCAAGGGCCTTTTATTGCCGACGCACA
GGGAAAGTACCATTTGCGGA

Product: ExsD protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSQQDHHSPNQGLFAGRRVTVVQPDTLSRDRLVGQLSVLRYQDAGVITSQQMALLQRLLPRTRRESLLGSIWFQRRLDAA
LAVSREELQQILRLAGSEHCDWVQQLGDRINLADRPLLWHWVLYPLHRWWVQRLEPLYGAWLNELEQLQVMHRQLNARAV
FWQTVVDVPADLESRIADQLEQLNQREQELTRLQSDCETRLQLAWPAWYAQTSKEGDLAHLMPVPLELGTFWHALQALPH
QDEAALTLHEWLAGRGIALGQDHFYWQPPAP

Sequences:

>Translated_271_residues
MSQQDHHSPNQGLFAGRRVTVVQPDTLSRDRLVGQLSVLRYQDAGVITSQQMALLQRLLPRTRRESLLGSIWFQRRLDAA
LAVSREELQQILRLAGSEHCDWVQQLGDRINLADRPLLWHWVLYPLHRWWVQRLEPLYGAWLNELEQLQVMHRQLNARAV
FWQTVVDVPADLESRIADQLEQLNQREQELTRLQSDCETRLQLAWPAWYAQTSKEGDLAHLMPVPLELGTFWHALQALPH
QDEAALTLHEWLAGRGIALGQDHFYWQPPAP
>Mature_270_residues
SQQDHHSPNQGLFAGRRVTVVQPDTLSRDRLVGQLSVLRYQDAGVITSQQMALLQRLLPRTRRESLLGSIWFQRRLDAAL
AVSREELQQILRLAGSEHCDWVQQLGDRINLADRPLLWHWVLYPLHRWWVQRLEPLYGAWLNELEQLQVMHRQLNARAVF
WQTVVDVPADLESRIADQLEQLNQREQELTRLQSDCETRLQLAWPAWYAQTSKEGDLAHLMPVPLELGTFWHALQALPHQ
DEAALTLHEWLAGRGIALGQDHFYWQPPAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31534; Mature: 31403

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQDHHSPNQGLFAGRRVTVVQPDTLSRDRLVGQLSVLRYQDAGVITSQQMALLQRLLP
CCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
RTRRESLLGSIWFQRRLDAALAVSREELQQILRLAGSEHCDWVQQLGDRINLADRPLLWH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHH
WVLYPLHRWWVQRLEPLYGAWLNELEQLQVMHRQLNARAVFWQTVVDVPADLESRIADQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHH
EQLNQREQELTRLQSDCETRLQLAWPAWYAQTSKEGDLAHLMPVPLELGTFWHALQALPH
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHCCC
QDEAALTLHEWLAGRGIALGQDHFYWQPPAP
CCHHHHHHHHHHHCCCCEECCCCCEECCCCC
>Mature Secondary Structure 
SQQDHHSPNQGLFAGRRVTVVQPDTLSRDRLVGQLSVLRYQDAGVITSQQMALLQRLLP
CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
RTRRESLLGSIWFQRRLDAALAVSREELQQILRLAGSEHCDWVQQLGDRINLADRPLLWH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHH
WVLYPLHRWWVQRLEPLYGAWLNELEQLQVMHRQLNARAVFWQTVVDVPADLESRIADQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHH
EQLNQREQELTRLQSDCETRLQLAWPAWYAQTSKEGDLAHLMPVPLELGTFWHALQALPH
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHCCC
QDEAALTLHEWLAGRGIALGQDHFYWQPPAP
CCHHHHHHHHHHHCCCCEECCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA