Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is ascB [H]
Identifier: 145301441
GI number: 145301441
Start: 60552
End: 60977
Strand: Reverse
Name: ascB [H]
Synonym: ASA_P5G058
Alternate gene names: 145301441
Gene position: 60977-60552 (Counterclockwise)
Preceding gene: 145301442
Following gene: 145301440
Centisome position: 39.32
GC content: 59.15
Gene sequence:
>426_bases ATGCAAACGCTACTGAATCGATTGGCCGCAAACCTTGGTCAAGGGCCTTTTATTGCCGACGCACAGGGAAAGTACCATTT GCGGATCGATGGTTATCCCCTCTTTCTGACTCCCAGAAACGGTGAGTTGCTGCTGAGTACCCCGCTTGCAAGCAGCCAGA GAAATGACGCTGAGGCCCATGATCCGGCGTTGCTAAAGCGTCTGTTGCAACAGGTGGTGGTTTGGGGCCGTCATGCCCCC CATGCCCTGGTGCTGGATGATCTTGGCAATTTGCAGCTGGAGGCGCGGCTCGCGCTGGAGTGGCTCGACGAGGCGCTGCT GGCGGAGCGCCTGAGCCAGCACATCGCCCTGCTGGAGCGCTTGGAACCCCAATTGACCGAGGCCGCCTTGGCCCCCCAAT GGAGACAGATGATATGGCACCCTTGA
Upstream 100 bases:
>100_bases AGCCCTAACCCTGCATGAGTGGCTGGCCGGTCGGGGCATTGCCTTGGGTCAGGATCACTTCTACTGGCAGCCTCCTGCTC CCTAGATAGCCCGAGGAACT
Downstream 100 bases:
>100_bases GCGTGCAACCCCTGCTGCGTCCCCTGTTGTGGATCTGCCTCGCCGTGATGGCGTGGCAGCGTCCCGCCATGGCACAGGAG CTGGACTGGGTGCCCATGCC
Product: AscB protein
Products: NA
Alternate protein names: Yop proteins translocation protein B [H]
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MQTLLNRLAANLGQGPFIADAQGKYHLRIDGYPLFLTPRNGELLLSTPLASSQRNDAEAHDPALLKRLLQQVVVWGRHAP HALVLDDLGNLQLEARLALEWLDEALLAERLSQHIALLERLEPQLTEAALAPQWRQMIWHP
Sequences:
>Translated_141_residues MQTLLNRLAANLGQGPFIADAQGKYHLRIDGYPLFLTPRNGELLLSTPLASSQRNDAEAHDPALLKRLLQQVVVWGRHAP HALVLDDLGNLQLEARLALEWLDEALLAERLSQHIALLERLEPQLTEAALAPQWRQMIWHP >Mature_141_residues MQTLLNRLAANLGQGPFIADAQGKYHLRIDGYPLFLTPRNGELLLSTPLASSQRNDAEAHDPALLKRLLQQVVVWGRHAP HALVLDDLGNLQLEARLALEWLDEALLAERLSQHIALLERLEPQLTEAALAPQWRQMIWHP
Specific function: Functions as a specific chaperone for yopN. It could facilitate the secretion and the subsequent translocation of yopN [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein (By similarity). Note=Not exported across the inner membrane (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013353 - InterPro: IPR010261 [H]
Pfam domain/function: PF05932 CesT [H]
EC number: NA
Molecular weight: Translated: 15898; Mature: 15898
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLLNRLAANLGQGPFIADAQGKYHLRIDGYPLFLTPRNGELLLSTPLASSQRNDAEAH CHHHHHHHHHHCCCCCEEECCCCEEEEEECCEEEEEECCCCCEEEECCCCCCCCCCCCCC DPALLKRLLQQVVVWGRHAPHALVLDDLGNLQLEARLALEWLDEALLAERLSQHIALLER CHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEPQLTEAALAPQWRQMIWHP HCHHHHHHHHCHHHHHHCCCC >Mature Secondary Structure MQTLLNRLAANLGQGPFIADAQGKYHLRIDGYPLFLTPRNGELLLSTPLASSQRNDAEAH CHHHHHHHHHHCCCCCEEECCCCEEEEEECCEEEEEECCCCCEEEECCCCCCCCCCCCCC DPALLKRLLQQVVVWGRHAPHALVLDDLGNLQLEARLALEWLDEALLAERLSQHIALLER CHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEPQLTEAALAPQWRQMIWHP HCHHHHHHHHCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11402007 [H]