Definition | Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete sequence. |
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Accession | NC_009350 |
Length | 155,098 |
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The map label for this gene is ascH [H]
Identifier: 145301435
GI number: 145301435
Start: 56096
End: 56650
Strand: Reverse
Name: ascH [H]
Synonym: ASA_P5G052
Alternate gene names: 145301435
Gene position: 56650-56096 (Counterclockwise)
Preceding gene: 145301436
Following gene: 145301434
Centisome position: 36.53
GC content: 61.62
Gene sequence:
>555_bases ATGAAAATTGAAGGCAGCGATCAGTTGGGGGGAGAGCAGCCGCAGCGTCAGCCTCTCCCGCCCGAATCCATGGCCCAACG CCAGCTCGAGCGACTGCTGGCCAAGGCCCCCGAATCGGATCTGTTCGAACGCTGGCAACAGGGAGCTCCCCTTGAGGGTT TGCTGGCCGTTGTGGCACCAGCCGCCAAGCGCGAACTGCTCTGGCAGATCTACCAACAGGGCAACAAACCGGCGCCGGAG ATTGGCAAGCAGCTGTTTGCCCCGGTCACCGACAAGCTGATCGCGCGTTTTGGCGAGCGTCAGTCGCCGGTGCTGGATGC CATCGATCTGCCGGAGTTGCGAGCAACCATGCGGGAGTTTGACCCTCTGGCGTCGCGGCGGGAGAAGGTGTTGCTGAACC TGTTGAGCGAGCTTAGGGACGGGCAGGGCGCTGTGCCCGCAGAACATCTATTTCTCGATGCTCTGGCCCGGCGCGAGCTG ATGACCCTGATCCCGCTCAACGGCATGGTGGATAATCTGATGCGCAATTCGCACAAACTTGATCTGGAGGCGTGA
Upstream 100 bases:
>100_bases GTCAGCAGGAGGCGCTGGCTGCACGGTTGCTCCGACTGGAACAAAGCGATCAGCCCGCCTTGCAACAGTTTGCCGTCGGC CTGCGCGAGCAGATGATCTC
Downstream 100 bases:
>100_bases TGGAAATTGCACAGTCTGCCCAGGCGGTGGTAACCAGCCTGGATGAGTTGAAAGCGGTGGATCTCTCCTCGCCCCATGTC GCCAGTTTTGAACAGGCGAT
Product: AscH protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MKIEGSDQLGGEQPQRQPLPPESMAQRQLERLLAKAPESDLFERWQQGAPLEGLLAVVAPAAKRELLWQIYQQGNKPAPE IGKQLFAPVTDKLIARFGERQSPVLDAIDLPELRATMREFDPLASRREKVLLNLLSELRDGQGAVPAEHLFLDALARREL MTLIPLNGMVDNLMRNSHKLDLEA
Sequences:
>Translated_184_residues MKIEGSDQLGGEQPQRQPLPPESMAQRQLERLLAKAPESDLFERWQQGAPLEGLLAVVAPAAKRELLWQIYQQGNKPAPE IGKQLFAPVTDKLIARFGERQSPVLDAIDLPELRATMREFDPLASRREKVLLNLLSELRDGQGAVPAEHLFLDALARREL MTLIPLNGMVDNLMRNSHKLDLEA >Mature_184_residues MKIEGSDQLGGEQPQRQPLPPESMAQRQLERLLAKAPESDLFERWQQGAPLEGLLAVVAPAAKRELLWQIYQQGNKPAPE IGKQLFAPVTDKLIARFGERQSPVLDAIDLPELRATMREFDPLASRREKVLLNLLSELRDGQGAVPAEHLFLDALARREL MTLIPLNGMVDNLMRNSHKLDLEA
Specific function: Belongs to an operon involved in the translocation of Yop proteins across the bacterial membranes or in the specific control of this function [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013349 [H]
Pfam domain/function: PF09025 YopR_core [H]
EC number: NA
Molecular weight: Translated: 20658; Mature: 20658
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEGSDQLGGEQPQRQPLPPESMAQRQLERLLAKAPESDLFERWQQGAPLEGLLAVVAP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH AAKRELLWQIYQQGNKPAPEIGKQLFAPVTDKLIARFGERQSPVLDAIDLPELRATMREF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHH DPLASRREKVLLNLLSELRDGQGAVPAEHLFLDALARRELMTLIPLNGMVDNLMRNSHKL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC DLEA CCCC >Mature Secondary Structure MKIEGSDQLGGEQPQRQPLPPESMAQRQLERLLAKAPESDLFERWQQGAPLEGLLAVVAP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH AAKRELLWQIYQQGNKPAPEIGKQLFAPVTDKLIARFGERQSPVLDAIDLPELRATMREF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHH DPLASRREKVLLNLLSELRDGQGAVPAEHLFLDALARRELMTLIPLNGMVDNLMRNSHKL HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC DLEA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1860816 [H]