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The map label for this gene is ascL [H]

Identifier: 145301431

GI number: 145301431

Start: 53744

End: 54409

Strand: Reverse

Name: ascL [H]

Synonym: ASA_P5G048

Alternate gene names: 145301431

Gene position: 54409-53744 (Counterclockwise)

Preceding gene: 145301432

Following gene: 145301430

Centisome position: 35.08

GC content: 62.31

Gene sequence:

>666_bases
ATGCTGCCATTTGTTGAAATAAAGAGTAACCATCTGCAACTGGCGCCAAGCCAGCGTATTTTGCGTAGCCAGGATTACCT
CTCTTACCTGAGAGCACAGGAGCTGGTAGAGGCGGCCCGGGCCCAGGCGGCCGATATCGTGGCGGAGGCCCGCGCCGTCT
ATGAAGAGCAGAAGAGCCTTGGTTGGCAAGCCGGGATTGACGAGGCCCGGTGCGAACAGGCGATGCTGATCCACGAGACC
CAGTTGCAGTGCCAGGGGTACTATCGCACCGTGGAGCAGCAGATGAGCGAGGTGGTGCTGCAGGCGGTGCGCAAGATCCT
GCACGATTACGATCAGGTGGCGCTCACCCTCAAGGTTGTGCGGGAGGCGCTTTCGCTGGTGAGCAACCAGAAGCAGGTGA
CGATACGGGTTCATCCCGAGCAGGTGCAGGCGGTGCGCGACCAGATCGCCCGGGTACACAAGGATTTCCCCGAAATCGGC
TATCTCGAGATCTCCGCCGATGCCCGCCTCGATCAGGGGGGCTGCATCCTCGAGACCGAGGTGGGGATCATCGATGCCAG
CCTCGACGGCCAGGTGGAGGCGCTCTCCCTCGCCATGAGTTCGGCGCTGGAAAAGCGTGGTGAGCAGCAGGCCCGGCTCG
CCGGGGCGAGTGCCGCGGTTGAATAA

Upstream 100 bases:

>100_bases
TTCCTCCGGCGCCACCCGGGCCATCATGGCCTCTGGCGGCTGATCAGTTGCCACTGGCCCAGGCGCTTTGTCTCAAGATT
GCCAAACAGGTAACCCCCCA

Downstream 100 bases:

>100_bases
GGCGGCTGAATATATGGCCGGTTGCGTTAGAGAACATTTATCTGACAAGTCCCGCCGGTTTTTATTTAGCGATACCGAGA
TCTGTCGTATTGGAGATCAA

Product: type III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MLPFVEIKSNHLQLAPSQRILRSQDYLSYLRAQELVEAARAQAADIVAEARAVYEEQKSLGWQAGIDEARCEQAMLIHET
QLQCQGYYRTVEQQMSEVVLQAVRKILHDYDQVALTLKVVREALSLVSNQKQVTIRVHPEQVQAVRDQIARVHKDFPEIG
YLEISADARLDQGGCILETEVGIIDASLDGQVEALSLAMSSALEKRGEQQARLAGASAAVE

Sequences:

>Translated_221_residues
MLPFVEIKSNHLQLAPSQRILRSQDYLSYLRAQELVEAARAQAADIVAEARAVYEEQKSLGWQAGIDEARCEQAMLIHET
QLQCQGYYRTVEQQMSEVVLQAVRKILHDYDQVALTLKVVREALSLVSNQKQVTIRVHPEQVQAVRDQIARVHKDFPEIG
YLEISADARLDQGGCILETEVGIIDASLDGQVEALSLAMSSALEKRGEQQARLAGASAAVE
>Mature_221_residues
MLPFVEIKSNHLQLAPSQRILRSQDYLSYLRAQELVEAARAQAADIVAEARAVYEEQKSLGWQAGIDEARCEQAMLIHET
QLQCQGYYRTVEQQMSEVVLQAVRKILHDYDQVALTLKVVREALSLVSNQKQVTIRVHPEQVQAVRDQIARVHKDFPEIG
YLEISADARLDQGGCILETEVGIIDASLDGQVEALSLAMSSALEKRGEQQARLAGASAAVE

Specific function: Required for the export process of the Yop proteins [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018035
- InterPro:   IPR012842 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 24596; Mature: 24596

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPFVEIKSNHLQLAPSQRILRSQDYLSYLRAQELVEAARAQAADIVAEARAVYEEQKSL
CCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GWQAGIDEARCEQAMLIHETQLQCQGYYRTVEQQMSEVVLQAVRKILHDYDQVALTLKVV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REALSLVSNQKQVTIRVHPEQVQAVRDQIARVHKDFPEIGYLEISADARLDQGGCILETE
HHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEC
VGIIDASLDGQVEALSLAMSSALEKRGEQQARLAGASAAVE
CCEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHCHHHCCC
>Mature Secondary Structure
MLPFVEIKSNHLQLAPSQRILRSQDYLSYLRAQELVEAARAQAADIVAEARAVYEEQKSL
CCCCEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GWQAGIDEARCEQAMLIHETQLQCQGYYRTVEQQMSEVVLQAVRKILHDYDQVALTLKVV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REALSLVSNQKQVTIRVHPEQVQAVRDQIARVHKDFPEIGYLEISADARLDQGGCILETE
HHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEC
VGIIDASLDGQVEALSLAMSSALEKRGEQQARLAGASAAVE
CCEEECCCCCHHHHHHHHHHHHHHHHCHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1860816 [H]