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The map label for this gene is traT [H]

Identifier: 145301424

GI number: 145301424

Start: 39950

End: 40684

Strand: Direct

Name: traT [H]

Synonym: ASA_P5G041

Alternate gene names: 145301424

Gene position: 39950-40684 (Clockwise)

Preceding gene: 145301423

Following gene: 145301425

Centisome position: 25.76

GC content: 56.19

Gene sequence:

>735_bases
ATGATGAAAAAAACAGTTCTGGCCGTGGTGACGGTCTCCATGCTCGGTCTGGCAGGATGCTCAGCCGTACACACCGCAGT
AGCCAAACGCAATCTCGATGTGCAAACCAAGATGAGCGAAACCATCTTCCTGGAGCCCGCCGCAGAGCGCACCGTATACC
TGCAGATCCGCAACACCAGTACCGAGCAAGATCTGAGCCTTGAGCCCAAGTTGCGTCAGGCCTTGCAGAACAAGGGCATG
ACCATCTCCACCAACCCGGACACGGCGCAATACTGGATCCAGGCAAACGTCCTCTCGGTGGGTAAAATGAATTTGCGGGA
TGCCGAAAACACCCTCATATCCGGATATGGTGCCGGGGCCTTTGGCGCTGCGGCTGCTGCGGGGGTGGTCGGCTATAATA
GCTCCTCTGGCGGGGCTGCTTTGGGCGCGGGCCTGGTCGGGGCGCTCGTCGGGGTTGCCGCCGATGCCATGGTGGAAGAT
ACCAATTACACCATGGTCACCGACCTGCAAATTGCTGAGAAAGCTCCCAAGGGGGTCACCGTGACCACCGATAACATTGC
CATGCTCAAACAGGGAACGTCTGGCGGTAAAGTGCAAACCAGCACCGCCCAGGGTGATCGCCATAAATATCAAACCCGCG
TAGTGAGCAATGCCAACCAGATGAATCTGGAATTTAAAGACGCCAAAACGGCACTGGAAGACCAACTTTCAAAATCGGGC
GCTGGCATATTCTAA

Upstream 100 bases:

>100_bases
TGTTTTTAGCTCGGTGATCAAAGCATGGCGAGACGGTGATAAGTTAGATCCTGAACAATTGAAAGGGTTAGATATTTAAC
AACAAAAAGAGAGTACAACA

Downstream 100 bases:

>100_bases
GACCTGTTGACGGTTAATATCAGGGGGAGCTCCTCCCCCCTATCCTTGAGGCAATATCATGAGCTTAAACACCCGCGATG
TGACGCAGGGCGGGCAAGTC

Product: surface exclusion lipoprotein TraT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MMKKTVLAVVTVSMLGLAGCSAVHTAVAKRNLDVQTKMSETIFLEPAAERTVYLQIRNTSTEQDLSLEPKLRQALQNKGM
TISTNPDTAQYWIQANVLSVGKMNLRDAENTLISGYGAGAFGAAAAAGVVGYNSSSGGAALGAGLVGALVGVAADAMVED
TNYTMVTDLQIAEKAPKGVTVTTDNIAMLKQGTSGGKVQTSTAQGDRHKYQTRVVSNANQMNLEFKDAKTALEDQLSKSG
AGIF

Sequences:

>Translated_244_residues
MMKKTVLAVVTVSMLGLAGCSAVHTAVAKRNLDVQTKMSETIFLEPAAERTVYLQIRNTSTEQDLSLEPKLRQALQNKGM
TISTNPDTAQYWIQANVLSVGKMNLRDAENTLISGYGAGAFGAAAAAGVVGYNSSSGGAALGAGLVGALVGVAADAMVED
TNYTMVTDLQIAEKAPKGVTVTTDNIAMLKQGTSGGKVQTSTAQGDRHKYQTRVVSNANQMNLEFKDAKTALEDQLSKSG
AGIF
>Mature_244_residues
MMKKTVLAVVTVSMLGLAGCSAVHTAVAKRNLDVQTKMSETIFLEPAAERTVYLQIRNTSTEQDLSLEPKLRQALQNKGM
TISTNPDTAQYWIQANVLSVGKMNLRDAENTLISGYGAGAFGAAAAAGVVGYNSSSGGAALGAGLVGALVGVAADAMVED
TNYTMVTDLQIAEKAPKGVTVTTDNIAMLKQGTSGGKVQTSTAQGDRHKYQTRVVSNANQMNLEFKDAKTALEDQLSKSG
AGIF

Specific function: Responsible for preventing unproductive conjugation between bacteria carrying like plasmids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the traT lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008874 [H]

Pfam domain/function: PF05818 TraT [H]

EC number: NA

Molecular weight: Translated: 25539; Mature: 25539

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKTVLAVVTVSMLGLAGCSAVHTAVAKRNLDVQTKMSETIFLEPAAERTVYLQIRNTS
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCEEEECCCCCEEEEEEEECCC
TEQDLSLEPKLRQALQNKGMTISTNPDTAQYWIQANVLSVGKMNLRDAENTLISGYGAGA
CCCCCCCCHHHHHHHHHCCCEEECCCCCEEEEEEEEEEEECCCCCCCCCCCEEECCCCCH
FGAAAAAGVVGYNSSSGGAALGAGLVGALVGVAADAMVEDTNYTMVTDLQIAEKAPKGVT
HHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEHHHCCCCCEE
VTTDNIAMLKQGTSGGKVQTSTAQGDRHKYQTRVVSNANQMNLEFKDAKTALEDQLSKSG
EEECCEEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCC
AGIF
CCCC
>Mature Secondary Structure
MMKKTVLAVVTVSMLGLAGCSAVHTAVAKRNLDVQTKMSETIFLEPAAERTVYLQIRNTS
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCEEEECCCCCEEEEEEEECCC
TEQDLSLEPKLRQALQNKGMTISTNPDTAQYWIQANVLSVGKMNLRDAENTLISGYGAGA
CCCCCCCCHHHHHHHHHCCCEEECCCCCEEEEEEEEEEEECCCCCCCCCCCEEECCCCCH
FGAAAAAGVVGYNSSSGGAALGAGLVGALVGVAADAMVEDTNYTMVTDLQIAEKAPKGVT
HHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEHHHCCCCCEE
VTTDNIAMLKQGTSGGKVQTSTAQGDRHKYQTRVVSNANQMNLEFKDAKTALEDQLSKSG
EEECCEEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCC
AGIF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3323526; 7915817; 2680768 [H]