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The map label for this gene is hns [H]

Identifier: 145301387

GI number: 145301387

Start: 531

End: 941

Strand: Reverse

Name: hns [H]

Synonym: ASA_P5G002

Alternate gene names: 145301387

Gene position: 941-531 (Counterclockwise)

Preceding gene: 145301388

Following gene: NA

Centisome position: 0.61

GC content: 56.2

Gene sequence:

>411_bases
GTGAATGACTTTCTGAAAGTGTTATTGAATATCCGCAGCCTTCGTGCAGCTGTCCGTGATCTGCCGTTCGAGCAGTTGCA
GGAAATTAAAGAGAAGTTTGATACGGTCGTCCAGGAGCAGCTAAAAGCTGCCGAAACAGATCAAGCGGCCAAGCTGGAGC
ATCAGAAGAAACTTGCTGAGTTCAGAGAACTGTTGGCAATAGAAGGGCTCTCGCCGGAAGATCTGCTCAGTGGCCGGGGG
CTGACCGCCTGGGCCGATGCGGGGGCGAAAGCAAAGCGTGCGCCACGTCCGGCCAAGTACCGTTACTTGGTAGAGGGTGA
AGCGCGTACCTGGACCGGTCAGGGCCGCATGCCTGCCCAGATCGCAGCTGCTATCGCAAGTGGCGAGTCGCTCGACGCAT
TTCTGATCTGA

Upstream 100 bases:

>100_bases
TATGATGAAGCTCGTTTATATTGCCTCACAGAAGCGCTATTAATAGCGCTCTCGATGTTTTTTTCGTATTCATCCATGAC
CATAACCAGGAGTGTTGCCG

Downstream 100 bases:

>100_bases
TCCCCCAGGTCAGCTGCTGGGAGAACGTGGCCAGGGGCGGCGGCGGTGGTCATTCCGCCCCTCGGCCGAGGTCGAACCGA
TGACCTCGCCTCACTGGCGG

Product: histone-like nucleoid structuring protein

Products: NA

Alternate protein names: Histone-like protein HLP-II [H]

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MNDFLKVLLNIRSLRAAVRDLPFEQLQEIKEKFDTVVQEQLKAAETDQAAKLEHQKKLAEFRELLAIEGLSPEDLLSGRG
LTAWADAGAKAKRAPRPAKYRYLVEGEARTWTGQGRMPAQIAAAIASGESLDAFLI

Sequences:

>Translated_136_residues
MNDFLKVLLNIRSLRAAVRDLPFEQLQEIKEKFDTVVQEQLKAAETDQAAKLEHQKKLAEFRELLAIEGLSPEDLLSGRG
LTAWADAGAKAKRAPRPAKYRYLVEGEARTWTGQGRMPAQIAAAIASGESLDAFLI
>Mature_136_residues
MNDFLKVLLNIRSLRAAVRDLPFEQLQEIKEKFDTVVQEQLKAAETDQAAKLEHQKKLAEFRELLAIEGLSPEDLLSGRG
LTAWADAGAKAKRAPRPAKYRYLVEGEARTWTGQGRMPAQIAAAIASGESLDAFLI

Specific function: H-NS binds tightly to ds-DNA, increases its thermal stability and inhibits transcription. It also binds to ss-DNA and RNA but with a much lower affinity. H-NS has possible histone-like function. May be a global transcriptional regulator through its abilit

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone-like protein H-NS family [H]

Homologues:

Organism=Escherichia coli, GI1787489, Length=138, Percent_Identity=46.3768115942029, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1789023, Length=137, Percent_Identity=45.2554744525547, Blast_Score=103, Evalue=3e-24,

Paralogues:

None

Copy number: 820 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1020 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 4632 Molecules/Cell In: Gr

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001801 [H]

Pfam domain/function: PF00816 Histone_HNS [H]

EC number: NA

Molecular weight: Translated: 15091; Mature: 15091

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDFLKVLLNIRSLRAAVRDLPFEQLQEIKEKFDTVVQEQLKAAETDQAAKLEHQKKLAE
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FRELLAIEGLSPEDLLSGRGLTAWADAGAKAKRAPRPAKYRYLVEGEARTWTGQGRMPAQ
HHHHHHHCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHH
IAAAIASGESLDAFLI
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNDFLKVLLNIRSLRAAVRDLPFEQLQEIKEKFDTVVQEQLKAAETDQAAKLEHQKKLAE
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FRELLAIEGLSPEDLLSGRGLTAWADAGAKAKRAPRPAKYRYLVEGEARTWTGQGRMPAQ
HHHHHHHCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHH
IAAAIASGESLDAFLI
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2494066 [H]