Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185440
Identifier: 159185440
GI number: 159185440
Start: 2180677
End: 2180940
Strand: Reverse
Name: 159185440
Synonym: Atu8173
Alternate gene names: NA
Gene position: 2180940-2180677 (Counterclockwise)
Preceding gene: 15889495
Following gene: 159185439
Centisome position: 76.75
GC content: 62.88
Gene sequence:
>264_bases ATGAGCACGACAGGCACCAATCGTTTTCTGGATGAATTCGCCAAGCTGATGACCGATGCGGCCGGCGCTGCGCAGGGCGT GCGCAAGGAAGCCGAGGCTGCTTTTCATGCGCAGGCGGATCGTTGGCTGAACAGCCTGGATGTCGTCCGGCGCGAGGAGT TCGACGCGGTTCGCGAAATGGCCATTCAGGCGCGGGATGAGAACGACGCGCTGCGCGCCCGCATCGAGACCCTGGAAGCA AAGCTTTCCGCCGCCAAGGACTGA
Upstream 100 bases:
>100_bases GATTTTTCGATTTCGCTTGCAAGCCGGCGGTGGAGTGCCTACCTGAAGGCTAGCAACAGTGGGCCAGACGATGCCCCTGA ACCGACGAAGGATGAGCGCC
Downstream 100 bases:
>100_bases TTTTTTCAGCATTTTTTTGAGAGGCCCCGGATCGCCTGCGATTCCGGGGTCTTTTGTTTTCGGGGTGTTTCGTCCGAAAG ACTTGTGGTTGTTAAAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSTTGTNRFLDEFAKLMTDAAGAAQGVRKEAEAAFHAQADRWLNSLDVVRREEFDAVREMAIQARDENDALRARIETLEA KLSAAKD
Sequences:
>Translated_87_residues MSTTGTNRFLDEFAKLMTDAAGAAQGVRKEAEAAFHAQADRWLNSLDVVRREEFDAVREMAIQARDENDALRARIETLEA KLSAAKD >Mature_86_residues STTGTNRFLDEFAKLMTDAAGAAQGVRKEAEAAFHAQADRWLNSLDVVRREEFDAVREMAIQARDENDALRARIETLEAK LSAAKD
Specific function: Unknown
COG id: COG2960
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9684; Mature: 9553
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTGTNRFLDEFAKLMTDAAGAAQGVRKEAEAAFHAQADRWLNSLDVVRREEFDAVREM CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIQARDENDALRARIETLEAKLSAAKD HHHCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STTGTNRFLDEFAKLMTDAAGAAQGVRKEAEAAFHAQADRWLNSLDVVRREEFDAVREM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIQARDENDALRARIETLEAKLSAAKD HHHCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA