Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159185439

Identifier: 159185439

GI number: 159185439

Start: 2179750

End: 2180250

Strand: Reverse

Name: 159185439

Synonym: Atu8172

Alternate gene names: NA

Gene position: 2180250-2179750 (Counterclockwise)

Preceding gene: 159185440

Following gene: 159185101

Centisome position: 76.73

GC content: 56.29

Gene sequence:

>501_bases
ATGAGTCTGATAGAATTTGAAATTGAGCGTCAGTCCAATCCCGTGGACATGATCGAGATTGTCGCTGCCTCGAACGACTG
GTCGTTCGAACGTTCCGGCGAAGACGAGATCGCCATGACGGTGGCCGGTCACTGGGCCGATTATCACGTTTCCTTCTCGT
GGATGGAAGACTTCGAGGCGCTGCATCTGGCCTGCGCTTTCGACATCAAGGTGCCGGATCAGCGCGTCAACGAGGTCATT
CGCCTGTTGTCGCAGGTCAATGGCCAGGTGTTGATGGGGCATTTCGATCTGTGGCGGCAGGAAGATGTGGTGATCTTCCG
CCAGTCGCTGCTTCTGGCCGGTGGTGCCGAGCCGAACAACCAGCAGGTGGAAGTTCTGCTTTCCAGCGCGCTTGAGGCCT
GCGAGCAATATTATCAGGCATTCCAGTTCGTCGTCTGGTCGGGGCTGGATGCCAAAAGTGCAATCGAAGCGGTCATGTTC
GAGACCGTTGGAGAAGCTTGA

Upstream 100 bases:

>100_bases
TGGTGTCGGGCAATCGTCTCAAATGTTTATCCCGGTTCGTATGTGCGTTTTGTGCCCGGCGTTCAAAACACGACATTCTG
GCCGGCTGAGAAGGTGCCGC

Downstream 100 bases:

>100_bases
GCATGGTGTACAAGGCTTCCGGTCCGCTCGTCCTCGTGGGGGCCGGCAATATGGGCGGCGCCATGCTTTCGGGCTGGCTG
AAAAAGGGTGTGCCGGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSLIEFEIERQSNPVDMIEIVAASNDWSFERSGEDEIAMTVAGHWADYHVSFSWMEDFEALHLACAFDIKVPDQRVNEVI
RLLSQVNGQVLMGHFDLWRQEDVVIFRQSLLLAGGAEPNNQQVEVLLSSALEACEQYYQAFQFVVWSGLDAKSAIEAVMF
ETVGEA

Sequences:

>Translated_166_residues
MSLIEFEIERQSNPVDMIEIVAASNDWSFERSGEDEIAMTVAGHWADYHVSFSWMEDFEALHLACAFDIKVPDQRVNEVI
RLLSQVNGQVLMGHFDLWRQEDVVIFRQSLLLAGGAEPNNQQVEVLLSSALEACEQYYQAFQFVVWSGLDAKSAIEAVMF
ETVGEA
>Mature_165_residues
SLIEFEIERQSNPVDMIEIVAASNDWSFERSGEDEIAMTVAGHWADYHVSFSWMEDFEALHLACAFDIKVPDQRVNEVIR
LLSQVNGQVLMGHFDLWRQEDVVIFRQSLLLAGGAEPNNQQVEVLLSSALEACEQYYQAFQFVVWSGLDAKSAIEAVMFE
TVGEA

Specific function: Unknown

COG id: COG5465

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18793; Mature: 18662

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIEFEIERQSNPVDMIEIVAASNDWSFERSGEDEIAMTVAGHWADYHVSFSWMEDFEA
CCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHHH
LHLACAFDIKVPDQRVNEVIRLLSQVNGQVLMGHFDLWRQEDVVIFRQSLLLAGGAEPNN
HHEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCHHHHHHHHHHCCCCCCCC
QQVEVLLSSALEACEQYYQAFQFVVWSGLDAKSAIEAVMFETVGEA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLIEFEIERQSNPVDMIEIVAASNDWSFERSGEDEIAMTVAGHWADYHVSFSWMEDFEA
CCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHHH
LHLACAFDIKVPDQRVNEVIRLLSQVNGQVLMGHFDLWRQEDVVIFRQSLLLAGGAEPNN
HHEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCHHHHHHHHHHCCCCCCCC
QQVEVLLSSALEACEQYYQAFQFVVWSGLDAKSAIEAVMFETVGEA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA