Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159185434

Identifier: 159185434

GI number: 159185434

Start: 1471602

End: 1472054

Strand: Direct

Name: 159185434

Synonym: Atu8157

Alternate gene names: NA

Gene position: 1471602-1472054 (Clockwise)

Preceding gene: 15888799

Following gene: 159184787

Centisome position: 51.79

GC content: 55.63

Gene sequence:

>453_bases
ATGTTGGAGGAGTTTATCGTGCAAGCCAAGTCTGCAACATATGTCGGCGGCGGCGATAAATCTGCGACCCCCACGCGTCA
GGGATCGCACGATCTCGGTTATCGGGAAGGAGACTGGCATTATGTCGACAGCTATTTCGGGGGAACCGATTTCATCGGCC
AGGAGGTCGTCTGGCACCAGGGAACCGCGGTGTGGGCGATGAGTTATTACGGCCGTATTCTCAGGCCTGATATGATCGAC
GGCACGACGGCCGGTATGGTCATTCAGCGGTCGCTCTCCACTCTCTATCGGGAAGGCCGCTTTCTCGGCGGCTTTACCCA
TCCGGTGGAAAATCTGATCTATGTTGATACGAATGCTGGTGAATTCGAGTCCTTCACCGGTGTCGAGCGCATCTACCGGG
GACATGTCGAGACGTACCGGCTTGACTATCATGGCGGGATCATAAAGCCATGA

Upstream 100 bases:

>100_bases
CAGCGCTGAAATAGCGGCTCGACGTCGTGCGGCAGGATGCTTGCGATGATCGCGAAAACCGTCTATGTTCACTTTATGTT
CTAGATCGTGGAGAGGGTCA

Downstream 100 bases:

>100_bases
GAAGTGCGATGACTGGGGCGATGATAGTTCACCGCCCCCGTTTTTCGTTAGCAGCTTAGCCGGGCTGCTTCGTCTTGCGC
AGATACGGAAGAACCGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MLEEFIVQAKSATYVGGGDKSATPTRQGSHDLGYREGDWHYVDSYFGGTDFIGQEVVWHQGTAVWAMSYYGRILRPDMID
GTTAGMVIQRSLSTLYREGRFLGGFTHPVENLIYVDTNAGEFESFTGVERIYRGHVETYRLDYHGGIIKP

Sequences:

>Translated_150_residues
MLEEFIVQAKSATYVGGGDKSATPTRQGSHDLGYREGDWHYVDSYFGGTDFIGQEVVWHQGTAVWAMSYYGRILRPDMID
GTTAGMVIQRSLSTLYREGRFLGGFTHPVENLIYVDTNAGEFESFTGVERIYRGHVETYRLDYHGGIIKP
>Mature_150_residues
MLEEFIVQAKSATYVGGGDKSATPTRQGSHDLGYREGDWHYVDSYFGGTDFIGQEVVWHQGTAVWAMSYYGRILRPDMID
GTTAGMVIQRSLSTLYREGRFLGGFTHPVENLIYVDTNAGEFESFTGVERIYRGHVETYRLDYHGGIIKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16900; Mature: 16900

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEEFIVQAKSATYVGGGDKSATPTRQGSHDLGYREGDWHYVDSYFGGTDFIGQEVVWHQ
CCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEC
GTAVWAMSYYGRILRPDMIDGTTAGMVIQRSLSTLYREGRFLGGFTHPVENLIYVDTNAG
CCEEEEHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC
EFESFTGVERIYRGHVETYRLDYHGGIIKP
CCHHHHHHHHHHHCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MLEEFIVQAKSATYVGGGDKSATPTRQGSHDLGYREGDWHYVDSYFGGTDFIGQEVVWHQ
CCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEC
GTAVWAMSYYGRILRPDMIDGTTAGMVIQRSLSTLYREGRFLGGFTHPVENLIYVDTNAG
CCEEEEHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC
EFESFTGVERIYRGHVETYRLDYHGGIIKP
CCHHHHHHHHHHHCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA