Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185434
Identifier: 159185434
GI number: 159185434
Start: 1471602
End: 1472054
Strand: Direct
Name: 159185434
Synonym: Atu8157
Alternate gene names: NA
Gene position: 1471602-1472054 (Clockwise)
Preceding gene: 15888799
Following gene: 159184787
Centisome position: 51.79
GC content: 55.63
Gene sequence:
>453_bases ATGTTGGAGGAGTTTATCGTGCAAGCCAAGTCTGCAACATATGTCGGCGGCGGCGATAAATCTGCGACCCCCACGCGTCA GGGATCGCACGATCTCGGTTATCGGGAAGGAGACTGGCATTATGTCGACAGCTATTTCGGGGGAACCGATTTCATCGGCC AGGAGGTCGTCTGGCACCAGGGAACCGCGGTGTGGGCGATGAGTTATTACGGCCGTATTCTCAGGCCTGATATGATCGAC GGCACGACGGCCGGTATGGTCATTCAGCGGTCGCTCTCCACTCTCTATCGGGAAGGCCGCTTTCTCGGCGGCTTTACCCA TCCGGTGGAAAATCTGATCTATGTTGATACGAATGCTGGTGAATTCGAGTCCTTCACCGGTGTCGAGCGCATCTACCGGG GACATGTCGAGACGTACCGGCTTGACTATCATGGCGGGATCATAAAGCCATGA
Upstream 100 bases:
>100_bases CAGCGCTGAAATAGCGGCTCGACGTCGTGCGGCAGGATGCTTGCGATGATCGCGAAAACCGTCTATGTTCACTTTATGTT CTAGATCGTGGAGAGGGTCA
Downstream 100 bases:
>100_bases GAAGTGCGATGACTGGGGCGATGATAGTTCACCGCCCCCGTTTTTCGTTAGCAGCTTAGCCGGGCTGCTTCGTCTTGCGC AGATACGGAAGAACCGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Helix-Turn-Helix Domain-Containing Protein
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MLEEFIVQAKSATYVGGGDKSATPTRQGSHDLGYREGDWHYVDSYFGGTDFIGQEVVWHQGTAVWAMSYYGRILRPDMID GTTAGMVIQRSLSTLYREGRFLGGFTHPVENLIYVDTNAGEFESFTGVERIYRGHVETYRLDYHGGIIKP
Sequences:
>Translated_150_residues MLEEFIVQAKSATYVGGGDKSATPTRQGSHDLGYREGDWHYVDSYFGGTDFIGQEVVWHQGTAVWAMSYYGRILRPDMID GTTAGMVIQRSLSTLYREGRFLGGFTHPVENLIYVDTNAGEFESFTGVERIYRGHVETYRLDYHGGIIKP >Mature_150_residues MLEEFIVQAKSATYVGGGDKSATPTRQGSHDLGYREGDWHYVDSYFGGTDFIGQEVVWHQGTAVWAMSYYGRILRPDMID GTTAGMVIQRSLSTLYREGRFLGGFTHPVENLIYVDTNAGEFESFTGVERIYRGHVETYRLDYHGGIIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16900; Mature: 16900
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEEFIVQAKSATYVGGGDKSATPTRQGSHDLGYREGDWHYVDSYFGGTDFIGQEVVWHQ CCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEC GTAVWAMSYYGRILRPDMIDGTTAGMVIQRSLSTLYREGRFLGGFTHPVENLIYVDTNAG CCEEEEHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC EFESFTGVERIYRGHVETYRLDYHGGIIKP CCHHHHHHHHHHHCCCEEEEEECCCCCCCC >Mature Secondary Structure MLEEFIVQAKSATYVGGGDKSATPTRQGSHDLGYREGDWHYVDSYFGGTDFIGQEVVWHQ CCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEC GTAVWAMSYYGRILRPDMIDGTTAGMVIQRSLSTLYREGRFLGGFTHPVENLIYVDTNAG CCEEEEHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC EFESFTGVERIYRGHVETYRLDYHGGIIKP CCHHHHHHHHHHHCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA