Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185433
Identifier: 159185433
GI number: 159185433
Start: 1360932
End: 1361690
Strand: Direct
Name: 159185433
Synonym: Atu8156
Alternate gene names: NA
Gene position: 1360932-1361690 (Clockwise)
Preceding gene: 15888690
Following gene: 159184731
Centisome position: 47.89
GC content: 60.47
Gene sequence:
>759_bases ATGCAGACTGCCGAAAGCGACGTCATCCCCCTCAGCGGCTGGTTCTTCCGGGGAATGCGGGGCATTTTCTCGCTGCCCTC GCTCATTCTCATGACATCTTTTGTCGGTTTCAGCGCCTTTGCGCTGGAATCCGGGGTGGCGCGCGGCGAAGCGGTGTTCA TGACGCTTGTCATCTGGGCCTTGCCGGCCAAGATGATCCTGATCGGCTCCATGGTCGGCGGCGCCAACCTTGCCGCCTGT TTTCTGGCGGTCACGCTGTCTTCGGTGCGGATGATGCCGATGGTCGCCTCCATCGTTCCGGAAATGCGCGGTGCGAAGAC GCCGACATGGATCTTGCTGTTTCTCTCGCATTTCGTCGCGATCACGGCCTGGGTCTTCGCTACGCAAAATCTTTCAAAGG TGCCGCGTGAAGCACGCGCCGCCTGGTTCGCCGGTTTCGGCATCACGCTCACGGTCGTCAACGCCATCATCGTTGGCCTT TGTTACGGCGTGGTCGCCGCGTTTCCGCCGCTCGTTGCGGGTGTGCTGTTCTTTCTGACGCCGGTCTATTTCATCGCATC CATCTGGGCTTCGGCCCGCCATTCCGTCGTCAAGGTCGCCTTCGTCATCGGCGTGATTGCCGGACCCGCCTTTGCGTTGG TCGCACCGGAATTCGATATTCTCTATGCCGGTATCGGTGGCGGCACTTTGGCCTACGTCATCGATCGCTACGTTTTCCGC CGCCGGATCAAACCCGTCTCACCAGAGGGCGAACCATGA
Upstream 100 bases:
>100_bases GAAAGTACCGAAGAAGAAGTAGTCCAGGTCTTTGACCTATAGACGGATGCCGGGCGAGAGCCCGGCATTTTCATGCCTGT CCATTCCTGATGGAATTCAA
Downstream 100 bases:
>100_bases TGACCGATAACTGGTGGGCGCCGTATCTGTTCATCGCCATCGCAGGCTGGCTGGCGACCGATCTCTGGCGCTGGCTCGGC GTCCTCGCCGGTAACCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: AzlC Protein; AzlC-Like; Permease; Branched-Chain Amino Acid Permease
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MQTAESDVIPLSGWFFRGMRGIFSLPSLILMTSFVGFSAFALESGVARGEAVFMTLVIWALPAKMILIGSMVGGANLAAC FLAVTLSSVRMMPMVASIVPEMRGAKTPTWILLFLSHFVAITAWVFATQNLSKVPREARAAWFAGFGITLTVVNAIIVGL CYGVVAAFPPLVAGVLFFLTPVYFIASIWASARHSVVKVAFVIGVIAGPAFALVAPEFDILYAGIGGGTLAYVIDRYVFR RRIKPVSPEGEP
Sequences:
>Translated_252_residues MQTAESDVIPLSGWFFRGMRGIFSLPSLILMTSFVGFSAFALESGVARGEAVFMTLVIWALPAKMILIGSMVGGANLAAC FLAVTLSSVRMMPMVASIVPEMRGAKTPTWILLFLSHFVAITAWVFATQNLSKVPREARAAWFAGFGITLTVVNAIIVGL CYGVVAAFPPLVAGVLFFLTPVYFIASIWASARHSVVKVAFVIGVIAGPAFALVAPEFDILYAGIGGGTLAYVIDRYVFR RRIKPVSPEGEP >Mature_252_residues MQTAESDVIPLSGWFFRGMRGIFSLPSLILMTSFVGFSAFALESGVARGEAVFMTLVIWALPAKMILIGSMVGGANLAAC FLAVTLSSVRMMPMVASIVPEMRGAKTPTWILLFLSHFVAITAWVFATQNLSKVPREARAAWFAGFGITLTVVNAIIVGL CYGVVAAFPPLVAGVLFFLTPVYFIASIWASARHSVVKVAFVIGVIAGPAFALVAPEFDILYAGIGGGTLAYVIDRYVFR RRIKPVSPEGEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26989; Mature: 26989
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTAESDVIPLSGWFFRGMRGIFSLPSLILMTSFVGFSAFALESGVARGEAVFMTLVIWA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LPAKMILIGSMVGGANLAACFLAVTLSSVRMMPMVASIVPEMRGAKTPTWILLFLSHFVA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ITAWVFATQNLSKVPREARAAWFAGFGITLTVVNAIIVGLCYGVVAAFPPLVAGVLFFLT HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVYFIASIWASARHSVVKVAFVIGVIAGPAFALVAPEFDILYAGIGGGTLAYVIDRYVFR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCEEEEECCCCHHHHHHHHHHHHH RRIKPVSPEGEP HHCCCCCCCCCC >Mature Secondary Structure MQTAESDVIPLSGWFFRGMRGIFSLPSLILMTSFVGFSAFALESGVARGEAVFMTLVIWA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LPAKMILIGSMVGGANLAACFLAVTLSSVRMMPMVASIVPEMRGAKTPTWILLFLSHFVA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ITAWVFATQNLSKVPREARAAWFAGFGITLTVVNAIIVGLCYGVVAAFPPLVAGVLFFLT HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVYFIASIWASARHSVVKVAFVIGVIAGPAFALVAPEFDILYAGIGGGTLAYVIDRYVFR HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCEEEEECCCCHHHHHHHHHHHHH RRIKPVSPEGEP HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA