Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159185394

Identifier: 159185394

GI number: 159185394

Start: 2818175

End: 2818996

Strand: Reverse

Name: 159185394

Synonym: Atu2815

Alternate gene names: NA

Gene position: 2818996-2818175 (Counterclockwise)

Preceding gene: 159185395

Following gene: 15890061

Centisome position: 99.21

GC content: 60.34

Gene sequence:

>822_bases
ATGCTCATCGACGCCCACCAGCATTTCTGGCTGATGAAGGATCGCGCCGGGCAATGGCCGCCGCCATCGCTGGCCGCTAT
CTACCGGGATTTTCTTCCTACCGATCTGTCGCCATTGCTGACGGCCGCCGGGGTTTCTGGCACGGTGCTCGTGCAGACGA
TGGAGACGGCGGCCGACACGGATTTCATGCTGGAGCTTGCTGAAAACACCGATTTCATCAAGGGCGTTGTCGGCTGGGTG
GATATGAAGTCTGCCGAAGTGACCGCGGAAATTGCCCGCCGGGCGAAACATCCAGCCTTCAAGGGCGTGCGCCCCATGCT
TCAGGGCATGGAAGATGTCGCCTGGATAGACGATGCCGCGCTGAATGCTGCCGTGGAGGCGCTGGTGAAGCACGGTCTGG
TGTTCGATGCGCTGGTCCTGCCGCCCAATCTGCCACATCTTCTCTCCTTTGCCAGCAAGCATCCAGAGTTGCCTGTTGTT
ATCGATCATGGTGCGAAGCCTCTGATTGCCACCGGTCACTATCGTGACTGGCGGCGTAATATGGCGGCTCTTGCAGCCCG
TCCCAATGTCCATTGCAAGCTATCCGGCCTGCTGACCGAGCGCGGCGAGCAGCGTCCGGAAGCGGTGCGGCCCTATGCCG
AGACCATTCTGGAACTATTCGGCGGTGATCGCGTGATTTTCGGCAGTGACTGGCCGGTGCTGCGCCTTGCGGGCGACTTT
CAGGGCTGGCTGGATTTCTGCCGCGATATCGTGCCGGCGAAGGACCATGCGGCAGTTTTCGGCGGCAACGCCATTCGTTT
TTACTCCCTTACTGACAGGTGA

Upstream 100 bases:

>100_bases
TGGTTCGAGCAGTCTATCCCGGATGAATTCTGGTCCGAGCTGCACAAGCGTGGCCTGATTGCTGAAGGTGCGCCTGTGCC
CGGCGGAAAGGCCTGAGGCA

Downstream 100 bases:

>100_bases
TGCATGCTGGCGATTTTCTGTGACACTCCCGGTCAATTAACCGCCAAGGATCTGCCGAACCCCGTGCGCGGCGAAGGTGA
AGTCCTGGTACGTATTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MLIDAHQHFWLMKDRAGQWPPPSLAAIYRDFLPTDLSPLLTAAGVSGTVLVQTMETAADTDFMLELAENTDFIKGVVGWV
DMKSAEVTAEIARRAKHPAFKGVRPMLQGMEDVAWIDDAALNAAVEALVKHGLVFDALVLPPNLPHLLSFASKHPELPVV
IDHGAKPLIATGHYRDWRRNMAALAARPNVHCKLSGLLTERGEQRPEAVRPYAETILELFGGDRVIFGSDWPVLRLAGDF
QGWLDFCRDIVPAKDHAAVFGGNAIRFYSLTDR

Sequences:

>Translated_273_residues
MLIDAHQHFWLMKDRAGQWPPPSLAAIYRDFLPTDLSPLLTAAGVSGTVLVQTMETAADTDFMLELAENTDFIKGVVGWV
DMKSAEVTAEIARRAKHPAFKGVRPMLQGMEDVAWIDDAALNAAVEALVKHGLVFDALVLPPNLPHLLSFASKHPELPVV
IDHGAKPLIATGHYRDWRRNMAALAARPNVHCKLSGLLTERGEQRPEAVRPYAETILELFGGDRVIFGSDWPVLRLAGDF
QGWLDFCRDIVPAKDHAAVFGGNAIRFYSLTDR
>Mature_273_residues
MLIDAHQHFWLMKDRAGQWPPPSLAAIYRDFLPTDLSPLLTAAGVSGTVLVQTMETAADTDFMLELAENTDFIKGVVGWV
DMKSAEVTAEIARRAKHPAFKGVRPMLQGMEDVAWIDDAALNAAVEALVKHGLVFDALVLPPNLPHLLSFASKHPELPVV
IDHGAKPLIATGHYRDWRRNMAALAARPNVHCKLSGLLTERGEQRPEAVRPYAETILELFGGDRVIFGSDWPVLRLAGDF
QGWLDFCRDIVPAKDHAAVFGGNAIRFYSLTDR

Specific function: Unknown

COG id: COG3618

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006992 [H]

Pfam domain/function: PF04909 Amidohydro_2 [H]

EC number: NA

Molecular weight: Translated: 30152; Mature: 30152

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDAHQHFWLMKDRAGQWPPPSLAAIYRDFLPTDLSPLLTAAGVSGTVLVQTMETAADT
CEECCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEHHHHCCH
DFMLELAENTDFIKGVVGWVDMKSAEVTAEIARRAKHPAFKGVRPMLQGMEDVAWIDDAA
HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHH
LNAAVEALVKHGLVFDALVLPPNLPHLLSFASKHPELPVVIDHGAKPLIATGHYRDWRRN
HHHHHHHHHHCCHHHEEEECCCCCHHHHHHHHCCCCCCEEECCCCCCEEECCCCHHHHHH
MAALAARPNVHCKLSGLLTERGEQRPEAVRPYAETILELFGGDRVIFGSDWPVLRLAGDF
HHHHHCCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCH
QGWLDFCRDIVPAKDHAAVFGGNAIRFYSLTDR
HHHHHHHHHHCCCCCCCEEECCCEEEEEEECCC
>Mature Secondary Structure
MLIDAHQHFWLMKDRAGQWPPPSLAAIYRDFLPTDLSPLLTAAGVSGTVLVQTMETAADT
CEECCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEEHHHHCCH
DFMLELAENTDFIKGVVGWVDMKSAEVTAEIARRAKHPAFKGVRPMLQGMEDVAWIDDAA
HHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHH
LNAAVEALVKHGLVFDALVLPPNLPHLLSFASKHPELPVVIDHGAKPLIATGHYRDWRRN
HHHHHHHHHHCCHHHEEEECCCCCHHHHHHHHCCCCCCEEECCCCCCEEECCCCHHHHHH
MAALAARPNVHCKLSGLLTERGEQRPEAVRPYAETILELFGGDRVIFGSDWPVLRLAGDF
HHHHHCCCCCEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCH
QGWLDFCRDIVPAKDHAAVFGGNAIRFYSLTDR
HHHHHHHHHHCCCCCCCEEECCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]