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The map label for this gene is cbiD [H]

Identifier: 159185386

GI number: 159185386

Start: 2797189

End: 2798325

Strand: Direct

Name: cbiD [H]

Synonym: Atu2795

Alternate gene names: 159185386

Gene position: 2797189-2798325 (Clockwise)

Preceding gene: 15890038

Following gene: 159185388

Centisome position: 98.44

GC content: 63.41

Gene sequence:

>1137_bases
ATGCATATGGAAACGGATGGAAAGACCCTTCGCCGCGGCTGGACCACGGGCACCTGCGCGGCAGCCGCCACGAAGGCGGC
TTGCGCCGCCCTTCTGACCGGCGAGTTTCCTTACCCTGTCGACGTGGAACTTCCAAGCGGCGCGAGGCCGGCATTTTCCC
TCGCCACCGAGGAAAAAGGTGAGAACTTCGCGCGCGCCGGCGTTGTCAAGGATGCCGGCGACGATCCAGATGTCACCCAT
GGCGCGCTGATCGAAAGCACGGTCAGACGGGGCGAACCGGGAAGCGGCATCACTTTCAGGGCCGGCAAGGGCGTCGGCAT
CATCACGAGGCCGGGCCTGCCCCTGCCACCGGGAGAACCCGCGATAAACCCCGTTCCGCGTAGGATGATCGAGACCGCCA
TTCGCGAAGTGGCCGGCGAGAATGCCGATTTCGAGGTCGAGATTTCCGTCCGCGACGGCGAGAAACTGGCAGAAAAAACC
CTGAATGGCAGGCTTGGAATCCTCGGCGGCATTTCTATTCTCGGCACCACCGGCGTTGTCATTCCCTTTTCCTGCTCGGC
CTGGATTCACTCCATCTGGCGCGGCATCGACGTGGCGCGGGCGACCGGCTGCACCCATGTTCTGGGCGCCACCGGCAATA
CATCCGAAAAGGCCGGCCAAGCCGTTTACGACCTGCCGGAAACCGCGCTGATCGACATGGGCGATTTCATCGGCGGCATG
CTGAAATATCTGCGCAGCCACCCGGTCGAGCGGGTAACGATCGCCGGTGGCGTTGCCAAGATGACCAAGCTCGCCCAGGG
CATGCTCGACGTACACTCCAAAAAGGGCCTTGCCGACCTTGAAGCATTGGCGGTATTGGCCGCCGAGGCGGGAGGGGATG
ACAATCTCGCCGTTGCCATCCGTCAGGCGAACATGGTCGCGCACGCCTTTCAGCTTGCCGAAAGCGTAGGAATAGACCTC
GGCGCGGTCGTTGCGGAAAAAGCCTGGGTGACCGCCGCCGCGGCACTGAAGACGCCGGCGATCGCGCTCGATATTCTGGT
GTTTGACCGTCAGGGTGCACTCAAGGGGCGCACCACCTCCACGCCGTCGCATCAGCCCGCACCATCCTCCTTCGGGGACC
GGAACCGGCGTACATAG

Upstream 100 bases:

>100_bases
GACCGGACCTTTTGCGGCGATGCTGTTCAAAATCTGCGGTATCGACATTGTTCTTGGCTGCTTTTTAACGATGACGGAAA
AAGCCGTCCCGGCTATAGGA

Downstream 100 bases:

>100_bases
TCGGCGCTATAAAGCGCACTTTCGCGGAAATCCGTTGAGGCCAGACCATGCCCGACGAAGATCAGCGCCGTACGTTCCAC
CGGCTCGGCCACAAGCTTGC

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MHMETDGKTLRRGWTTGTCAAAATKAACAALLTGEFPYPVDVELPSGARPAFSLATEEKGENFARAGVVKDAGDDPDVTH
GALIESTVRRGEPGSGITFRAGKGVGIITRPGLPLPPGEPAINPVPRRMIETAIREVAGENADFEVEISVRDGEKLAEKT
LNGRLGILGGISILGTTGVVIPFSCSAWIHSIWRGIDVARATGCTHVLGATGNTSEKAGQAVYDLPETALIDMGDFIGGM
LKYLRSHPVERVTIAGGVAKMTKLAQGMLDVHSKKGLADLEALAVLAAEAGGDDNLAVAIRQANMVAHAFQLAESVGIDL
GAVVAEKAWVTAAAALKTPAIALDILVFDRQGALKGRTTSTPSHQPAPSSFGDRNRRT

Sequences:

>Translated_378_residues
MHMETDGKTLRRGWTTGTCAAAATKAACAALLTGEFPYPVDVELPSGARPAFSLATEEKGENFARAGVVKDAGDDPDVTH
GALIESTVRRGEPGSGITFRAGKGVGIITRPGLPLPPGEPAINPVPRRMIETAIREVAGENADFEVEISVRDGEKLAEKT
LNGRLGILGGISILGTTGVVIPFSCSAWIHSIWRGIDVARATGCTHVLGATGNTSEKAGQAVYDLPETALIDMGDFIGGM
LKYLRSHPVERVTIAGGVAKMTKLAQGMLDVHSKKGLADLEALAVLAAEAGGDDNLAVAIRQANMVAHAFQLAESVGIDL
GAVVAEKAWVTAAAALKTPAIALDILVFDRQGALKGRTTSTPSHQPAPSSFGDRNRRT
>Mature_378_residues
MHMETDGKTLRRGWTTGTCAAAATKAACAALLTGEFPYPVDVELPSGARPAFSLATEEKGENFARAGVVKDAGDDPDVTH
GALIESTVRRGEPGSGITFRAGKGVGIITRPGLPLPPGEPAINPVPRRMIETAIREVAGENADFEVEISVRDGEKLAEKT
LNGRLGILGGISILGTTGVVIPFSCSAWIHSIWRGIDVARATGCTHVLGATGNTSEKAGQAVYDLPETALIDMGDFIGGM
LKYLRSHPVERVTIAGGVAKMTKLAQGMLDVHSKKGLADLEALAVLAAEAGGDDNLAVAIRQANMVAHAFQLAESVGIDL
GAVVAEKAWVTAAAALKTPAIALDILVFDRQGALKGRTTSTPSHQPAPSSFGDRNRRT

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 39356; Mature: 39356

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMETDGKTLRRGWTTGTCAAAATKAACAALLTGEFPYPVDVELPSGARPAFSLATEEKG
CCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEHHHHHCC
ENFARAGVVKDAGDDPDVTHGALIESTVRRGEPGSGITFRAGKGVGIITRPGLPLPPGEP
CCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCCCCC
AINPVPRRMIETAIREVAGENADFEVEISVRDGEKLAEKTLNGRLGILGGISILGTTGVV
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCCEEEEECHHHHCCCCEE
IPFSCSAWIHSIWRGIDVARATGCTHVLGATGNTSEKAGQAVYDLPETALIDMGDFIGGM
EECCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHCCHHHCCCCHHHHHHHHHHHHH
LKYLRSHPVERVTIAGGVAKMTKLAQGMLDVHSKKGLADLEALAVLAAEAGGDDNLAVAI
HHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEE
RQANMVAHAFQLAESVGIDLGAVVAEKAWVTAAAALKTPAIALDILVFDRQGALKGRTTS
EHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCC
TPSHQPAPSSFGDRNRRT
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHMETDGKTLRRGWTTGTCAAAATKAACAALLTGEFPYPVDVELPSGARPAFSLATEEKG
CCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEHHHHHCC
ENFARAGVVKDAGDDPDVTHGALIESTVRRGEPGSGITFRAGKGVGIITRPGLPLPPGEP
CCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCCCCC
AINPVPRRMIETAIREVAGENADFEVEISVRDGEKLAEKTLNGRLGILGGISILGTTGVV
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCCEEEEECHHHHCCCCEE
IPFSCSAWIHSIWRGIDVARATGCTHVLGATGNTSEKAGQAVYDLPETALIDMGDFIGGM
EECCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHCCHHHCCCCHHHHHHHHHHHHH
LKYLRSHPVERVTIAGGVAKMTKLAQGMLDVHSKKGLADLEALAVLAAEAGGDDNLAVAI
HHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEE
RQANMVAHAFQLAESVGIDLGAVVAEKAWVTAAAALKTPAIALDILVFDRQGALKGRTTS
EHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCC
TPSHQPAPSSFGDRNRRT
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]