Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is nadD [H]
Identifier: 159185377
GI number: 159185377
Start: 2782905
End: 2783489
Strand: Reverse
Name: nadD [H]
Synonym: Atu2778
Alternate gene names: 159185377
Gene position: 2783489-2782905 (Counterclockwise)
Preceding gene: 159185378
Following gene: 159185376
Centisome position: 97.96
GC content: 57.78
Gene sequence:
>585_bases ATGCCGCACGTGGAGCGCGGCATGGTCGTCGGGCTTTTCGGCGGCTCCTTCAATCCGCCGCATGCCGGTCATGCGCTCGT CGCCGAAATCGCGTTGCGCAGACTGGGCCTCGACCAGCTCTGGTGGATGGTCACGCCGGGTAATCCGCTGAAAAGCCGCT CCGAACTGGCGTCTCTTGAGGACCGTATCGCCGCCTGTGAAAGGCTCGTCAGTGATCCGCGCATCAAGGTAACGGCTTTT GAGAAATCGCTTGGGATCAGCTACACGGCCAATACGCTTGCCAAGGTGAAAGCAAAAAATCCGCATGTTCGCTTCATCTG GATCATGGGAGCCGACAATCTGAAGAGCTTCCATCGTTGGCAGAAATGGCGAGAGATCGCCGAGACCTTTCCAATCGCGG TGATTGATCGGCCAGGCTCCACCCTTTCTTATCTCTCCTCCACCATGGCGCAGGCTTTCAGCCAGGCGCGGATCGATGAG GATGATGCGGGTGTTTTGTGGAAAAAAAAGGCGCCCGCCTGGGTCTTCATCCATGGTCCGCGCTCGACGCTCAGTTCGAC GGCGCTCCGTAATAATCACAAATGA
Upstream 100 bases:
>100_bases CGAGCAGCTCACCTCGTTTAAATACCGTGTGCATGGCACCGGCCAGACACGGACCTGATATTTGCCGGCCGATAAGCGCC TCGACAGACGTTATCTCGCC
Downstream 100 bases:
>100_bases TGTATGCGACAGCCGTTGAAGGGTCCATATCTTGAAAAGTTAATGCTTTGATGCCACCTTCATGGGGTGACGCACAGATT CGCGTCGCCAGTATCTGTTT
Product: nicotinic acid mononucleotide adenylyltransferase
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase [H]
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MPHVERGMVVGLFGGSFNPPHAGHALVAEIALRRLGLDQLWWMVTPGNPLKSRSELASLEDRIAACERLVSDPRIKVTAF EKSLGISYTANTLAKVKAKNPHVRFIWIMGADNLKSFHRWQKWREIAETFPIAVIDRPGSTLSYLSSTMAQAFSQARIDE DDAGVLWKKKAPAWVFIHGPRSTLSSTALRNNHK
Sequences:
>Translated_194_residues MPHVERGMVVGLFGGSFNPPHAGHALVAEIALRRLGLDQLWWMVTPGNPLKSRSELASLEDRIAACERLVSDPRIKVTAF EKSLGISYTANTLAKVKAKNPHVRFIWIMGADNLKSFHRWQKWREIAETFPIAVIDRPGSTLSYLSSTMAQAFSQARIDE DDAGVLWKKKAPAWVFIHGPRSTLSSTALRNNHK >Mature_193_residues PHVERGMVVGLFGGSFNPPHAGHALVAEIALRRLGLDQLWWMVTPGNPLKSRSELASLEDRIAACERLVSDPRIKVTAFE KSLGISYTANTLAKVKAKNPHVRFIWIMGADNLKSFHRWQKWREIAETFPIAVIDRPGSTLSYLSSTMAQAFSQARIDED DAGVLWKKKAPAWVFIHGPRSTLSSTALRNNHK
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) [H]
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.18 [H]
Molecular weight: Translated: 21683; Mature: 21552
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHVERGMVVGLFGGSFNPPHAGHALVAEIALRRLGLDQLWWMVTPGNPLKSRSELASLE CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH DRIAACERLVSDPRIKVTAFEKSLGISYTANTLAKVKAKNPHVRFIWIMGADNLKSFHRW HHHHHHHHHHCCCCEEEEEEHHHCCCEECCHHHHEEECCCCCEEEEEEECCCCHHHHHHH QKWREIAETFPIAVIDRPGSTLSYLSSTMAQAFSQARIDEDDAGVLWKKKAPAWVFIHGP HHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECC RSTLSSTALRNNHK HHHHHHHHHHCCCC >Mature Secondary Structure PHVERGMVVGLFGGSFNPPHAGHALVAEIALRRLGLDQLWWMVTPGNPLKSRSELASLE CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH DRIAACERLVSDPRIKVTAFEKSLGISYTANTLAKVKAKNPHVRFIWIMGADNLKSFHRW HHHHHHHHHHCCCCEEEEEEHHHCCCEECCHHHHEEECCCCCEEEEEEECCCCHHHHHHH QKWREIAETFPIAVIDRPGSTLSYLSSTMAQAFSQARIDEDDAGVLWKKKAPAWVFIHGP HHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEECC RSTLSSTALRNNHK HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]