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The map label for this gene is yibP [H]

Identifier: 159185375

GI number: 159185375

Start: 2780168

End: 2781565

Strand: Reverse

Name: yibP [H]

Synonym: Atu2775

Alternate gene names: 159185375

Gene position: 2781565-2780168 (Counterclockwise)

Preceding gene: 15890025

Following gene: 159185374

Centisome position: 97.89

GC content: 59.66

Gene sequence:

>1398_bases
ATGGATACTGAGCCTCAACGACAACGGCACGCTGCCCTTGCGGGCGCGGTTATTGCTGCTTTCGTTTTAGGTGGTAGCCC
TGTTCATGCGCGTGATGATGCGGGAGCCGTTCCTGCGGCGACTGACGATTCGTCCCCCGCCGCGCTTCAGGCGCTGGAAA
AGCGTCGGGATCAGAACCGGCAGGATCTGGAAGAGCTGGTCGACAGCATCGGCCTCTCGGAGGACAAGACAAGGACGCTC
GAGGAAAGCATCGCTTCCCTCAATCAGGACAGCGCCCGCATCCGCGAAGAACTGATCGCATCGGCCGCCCGGCGCAAAGC
GCTGGAAGCCAAGATCAGTGACGGCGAAGATCGTCTGGCCAAGCTTTCTGTGCGCGAGGATGACGTCAAGGCATCGCTGC
GGGAAAGACGTGGCGTGCTGGCGGAGGTTCTGGCGGCGTTGCAGCGAATGGGCAGAAACCCGCCCCCCGCCCTTCTTGTT
TCGCCGGAAGACGCGCTTGCTTCGGTCCGTAGTGCCATTCTTCTCGGCGCAGTCGTGCCCGGCATTCGTGGTGAAACCGA
CAAGCTGGTCGCCGCTCTCAAAGAATTGACCGATGTCAGGCAGGCAATCGCTCGCGAAAAGGATGATCTTACGGGTATGA
TGACGGCAAGTCTGGAAGAGGAAAAACGCCTCGACCTGCTGATTGCCGAAAACGACCGCAAGAACACCCAGACGGCGGCG
CAGCTGGAGGCGGAACGCAAGCGATCTGAAGAGCTTGCGGGCAAGGCGACGAGCCTTGAGGGACTGGTTAGCTCGCTTGA
AGGCGAGATTACCTCGGTGCGTGAGGCGATGGAAAAGGCGCGGGCGGAAGAGCAGCGCCTGGCCCGTCTTTCCGAAGCGG
AACGCGAGAAGGAGCGTGCTGCGGCCGAGGCCGGAATGCCCGATAAAAACCGCATTGCGCCCGCATATCCCTTCGCGAGT
TTGAAGGGAAAGCTGGAGCTTCCGGTTACCGGCGAGGTGTTGCGGCGCTTCGGCGATGCGGATGGTACAGGCCACTTTTC
CAAGGGAATTGTTGTGGCGAGCGGACCGGAAGCCATCGTGACAGCGCCTGCGGATGGCTTCGTGGTGTTTGCCGGAGATT
TTCGCAGTTACGGCCGGATGATCATCCTCAATACGGGTAACGGATATCATGTGGTGATGACGGGCATGGACAATGTGAGG
ACGCGACAGGGCATGTTTGTGTTCTCCGGAGAGCCCATCGCCTCCATGGGTGCAAAAAGAGTAGCGAGTGCAGCAGCATT
GGCGCTGGAAACCGACCGGCCAACGCTCTACATTGAGTTCAGGAAAGATGGTGTGCCGGTTGATTCCCAACCATGGTGGA
CCGCAAAAAATACCGGAAGGGCGCACAATGATTCGTAA

Upstream 100 bases:

>100_bases
CTGCGGGGGGCTTTGACGGCAGCCTTTTTCAGGCCCCTTGGAAGATCGCGACAAAATCCGTAATATCGGCGCTTCCGCTT
CGGCAGCAAAGAAAGTTCAA

Downstream 100 bases:

>100_bases
GGTTTCGCTTCTCCTTATCGGTGGGCTTATGGGCGCCACGGCGATGAGCGTGATTTATTCGGCGAGCATGCCGGCACAGG
CGGCCGGGCCTTCGACCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MDTEPQRQRHAALAGAVIAAFVLGGSPVHARDDAGAVPAATDDSSPAALQALEKRRDQNRQDLEELVDSIGLSEDKTRTL
EESIASLNQDSARIREELIASAARRKALEAKISDGEDRLAKLSVREDDVKASLRERRGVLAEVLAALQRMGRNPPPALLV
SPEDALASVRSAILLGAVVPGIRGETDKLVAALKELTDVRQAIAREKDDLTGMMTASLEEEKRLDLLIAENDRKNTQTAA
QLEAERKRSEELAGKATSLEGLVSSLEGEITSVREAMEKARAEEQRLARLSEAEREKERAAAEAGMPDKNRIAPAYPFAS
LKGKLELPVTGEVLRRFGDADGTGHFSKGIVVASGPEAIVTAPADGFVVFAGDFRSYGRMIILNTGNGYHVVMTGMDNVR
TRQGMFVFSGEPIASMGAKRVASAAALALETDRPTLYIEFRKDGVPVDSQPWWTAKNTGRAHNDS

Sequences:

>Translated_465_residues
MDTEPQRQRHAALAGAVIAAFVLGGSPVHARDDAGAVPAATDDSSPAALQALEKRRDQNRQDLEELVDSIGLSEDKTRTL
EESIASLNQDSARIREELIASAARRKALEAKISDGEDRLAKLSVREDDVKASLRERRGVLAEVLAALQRMGRNPPPALLV
SPEDALASVRSAILLGAVVPGIRGETDKLVAALKELTDVRQAIAREKDDLTGMMTASLEEEKRLDLLIAENDRKNTQTAA
QLEAERKRSEELAGKATSLEGLVSSLEGEITSVREAMEKARAEEQRLARLSEAEREKERAAAEAGMPDKNRIAPAYPFAS
LKGKLELPVTGEVLRRFGDADGTGHFSKGIVVASGPEAIVTAPADGFVVFAGDFRSYGRMIILNTGNGYHVVMTGMDNVR
TRQGMFVFSGEPIASMGAKRVASAAALALETDRPTLYIEFRKDGVPVDSQPWWTAKNTGRAHNDS
>Mature_465_residues
MDTEPQRQRHAALAGAVIAAFVLGGSPVHARDDAGAVPAATDDSSPAALQALEKRRDQNRQDLEELVDSIGLSEDKTRTL
EESIASLNQDSARIREELIASAARRKALEAKISDGEDRLAKLSVREDDVKASLRERRGVLAEVLAALQRMGRNPPPALLV
SPEDALASVRSAILLGAVVPGIRGETDKLVAALKELTDVRQAIAREKDDLTGMMTASLEEEKRLDLLIAENDRKNTQTAA
QLEAERKRSEELAGKATSLEGLVSSLEGEITSVREAMEKARAEEQRLARLSEAEREKERAAAEAGMPDKNRIAPAYPFAS
LKGKLELPVTGEVLRRFGDADGTGHFSKGIVVASGPEAIVTAPADGFVVFAGDFRSYGRMIILNTGNGYHVVMTGMDNVR
TRQGMFVFSGEPIASMGAKRVASAAALALETDRPTLYIEFRKDGVPVDSQPWWTAKNTGRAHNDS

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=429, Percent_Identity=24.9417249417249, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 50165; Mature: 50165

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTEPQRQRHAALAGAVIAAFVLGGSPVHARDDAGAVPAATDDSSPAALQALEKRRDQNR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCH
QDLEELVDSIGLSEDKTRTLEESIASLNQDSARIREELIASAARRKALEAKISDGEDRLA
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KLSVREDDVKASLRERRGVLAEVLAALQRMGRNPPPALLVSPEDALASVRSAILLGAVVP
EECCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHCC
GIRGETDKLVAALKELTDVRQAIAREKDDLTGMMTASLEEEKRLDLLIAENDRKNTQTAA
CCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHH
QLEAERKRSEELAGKATSLEGLVSSLEGEITSVREAMEKARAEEQRLARLSEAEREKERA
HHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAEAGMPDKNRIAPAYPFASLKGKLELPVTGEVLRRFGDADGTGHFSKGIVVASGPEAIV
HHHCCCCCCCCCCCCCCHHHCCCCEECCCCHHHHHHHCCCCCCCCCCCCEEEECCCCEEE
TAPADGFVVFAGDFRSYGRMIILNTGNGYHVVMTGMDNVRTRQGMFVFSGEPIASMGAKR
ECCCCCEEEEECCHHHCCCEEEEECCCCEEEEEECCCCCHHHCCEEEECCCCHHHHHHHH
VASAAALALETDRPTLYIEFRKDGVPVDSQPWWTAKNTGRAHNDS
HHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDTEPQRQRHAALAGAVIAAFVLGGSPVHARDDAGAVPAATDDSSPAALQALEKRRDQNR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCH
QDLEELVDSIGLSEDKTRTLEESIASLNQDSARIREELIASAARRKALEAKISDGEDRLA
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KLSVREDDVKASLRERRGVLAEVLAALQRMGRNPPPALLVSPEDALASVRSAILLGAVVP
EECCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHCC
GIRGETDKLVAALKELTDVRQAIAREKDDLTGMMTASLEEEKRLDLLIAENDRKNTQTAA
CCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHH
QLEAERKRSEELAGKATSLEGLVSSLEGEITSVREAMEKARAEEQRLARLSEAEREKERA
HHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAEAGMPDKNRIAPAYPFASLKGKLELPVTGEVLRRFGDADGTGHFSKGIVVASGPEAIV
HHHCCCCCCCCCCCCCCHHHCCCCEECCCCHHHHHHHCCCCCCCCCCCCEEEECCCCEEE
TAPADGFVVFAGDFRSYGRMIILNTGNGYHVVMTGMDNVRTRQGMFVFSGEPIASMGAKR
ECCCCCEEEEECCHHHCCCEEEEECCCCEEEEEECCCCCHHHCCEEEECCCCHHHHHHHH
VASAAALALETDRPTLYIEFRKDGVPVDSQPWWTAKNTGRAHNDS
HHHHHHHEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]