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The map label for this gene is ctpA [H]

Identifier: 159185374

GI number: 159185374

Start: 2778850

End: 2780178

Strand: Reverse

Name: ctpA [H]

Synonym: Atu2774

Alternate gene names: 159185374

Gene position: 2780178-2778850 (Counterclockwise)

Preceding gene: 159185375

Following gene: 15890022

Centisome position: 97.84

GC content: 60.05

Gene sequence:

>1329_bases
ATGATTCGTAAGGTTTCGCTTCTCCTTATCGGTGGGCTTATGGGCGCCACGGCGATGAGCGTGATTTATTCGGCGAGCAT
GCCGGCACAGGCGGCCGGGCCTTCGACCTATAAGGAACTGTCGATTTTTGGCGACGTGTTCGAACGCGTGCGCGCACAAT
ATGTGACGCCGCCCGATGACGAGAAGCTGGTTGAAAATGCCATTAACGGCATGCTCAGCTCGCTCGATCCGCATTCGAGC
TTCATGAATGCCAAGGATGCCAACGACATGCGCACCCAGACCAAGGGTGAGTTCGGCGGTCTTGGCATCGAAGTGACCAT
GGAGAACGAGCTGGTCAAGGTCATCTCGCCGATGGACGACACACCGGCTTCGCGTGCAGGCATTCTCGCCGGTGACTATA
TTTCGGAAATCGACGGTACGCCGGTTCGCGGCCTGAAGCTGGAACAGGCCGTCGAAAAGATGCGCGGTGCCGTCAAGACG
CCGATCAAGCTGACGGTGATCCGCAAGGGTGCCGACAAGCCGCTCGAATTCACCGTCGTGCGTGACGTGATTGCCGTGCG
GGCCGTCAAGTCTCGCGTCGAGGGGGACAATGTCGGTTATCTGCGCGTCATCTCCTTTACCGAGAAGACCTATGACGATC
TCGAAAAGGCGATCAAGAAGATCAAGGCGGATGTGCCGGCCGACAAGCTGAAGGGCTATGTCCTCGACCTGCGCCTCAAC
CCCGGTGGTCTGCTCGATCAGGCGATCAATGTCTCCGACGCTTTCCTCGAGCGCGGTGAGGTTGTTTCGACCCGTGGCCG
CAATCCCGATGAGACTCGCCGCTTCAATGCGACGGCCGGCGATCTGACCGATGGCAAACCGGTGATCGTGCTCGTCAACG
GCGGTTCGGCTTCGGCTTCGGAAATCGTCGCGGGTGCGTTGCAGGATCTGCGTCGTGCGACCGTGGTCGGCACGCGCTCC
TTCGGTAAGGGTTCGGTGCAGACGATCATTCCGCTCGGTGAAGCGGGCGCGTTGCGCCTGACCACGGCGCTTTATTACAC
GCCGTCGGGCAAGTCGATCCAGGGTACGGGCATCGAGCCCGATATCAAGGTGGAGCAGCCGTTGCCGGCGGAATTGCAGG
GCCGTGTGACGGCTGAAGGGGAATCAAGCCTTTCCGGTCACATCAAAGGCCAGAGCGAGACCGACGAGGGTTCTGGTTCT
TCCGCCTACGTCCCGCCGGAAGCAAAGGACGACATCCAGCTCAACTATGCGCTGGACCTGTTGCGCGGTGCCAAGACGGA
TCCGTCTTTCCCGCCGAACCCGGACAAGGCTGTGGTCAACAAGCAGTAA

Upstream 100 bases:

>100_bases
GAAACCGACCGGCCAACGCTCTACATTGAGTTCAGGAAAGATGGTGTGCCGGTTGATTCCCAACCATGGTGGACCGCAAA
AAATACCGGAAGGGCGCACA

Downstream 100 bases:

>100_bases
GATGATGCGCTGGTTCGCCGGCGCGTTCTCTCCATTGCCCAACCATTTGGACGGACTGTTTATTGTCTTCGGACCTGCGA
AAACCGCTTCTGGGTCGTCA

Product: carboxy-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MIRKVSLLLIGGLMGATAMSVIYSASMPAQAAGPSTYKELSIFGDVFERVRAQYVTPPDDEKLVENAINGMLSSLDPHSS
FMNAKDANDMRTQTKGEFGGLGIEVTMENELVKVISPMDDTPASRAGILAGDYISEIDGTPVRGLKLEQAVEKMRGAVKT
PIKLTVIRKGADKPLEFTVVRDVIAVRAVKSRVEGDNVGYLRVISFTEKTYDDLEKAIKKIKADVPADKLKGYVLDLRLN
PGGLLDQAINVSDAFLERGEVVSTRGRNPDETRRFNATAGDLTDGKPVIVLVNGGSASASEIVAGALQDLRRATVVGTRS
FGKGSVQTIIPLGEAGALRLTTALYYTPSGKSIQGTGIEPDIKVEQPLPAELQGRVTAEGESSLSGHIKGQSETDEGSGS
SAYVPPEAKDDIQLNYALDLLRGAKTDPSFPPNPDKAVVNKQ

Sequences:

>Translated_442_residues
MIRKVSLLLIGGLMGATAMSVIYSASMPAQAAGPSTYKELSIFGDVFERVRAQYVTPPDDEKLVENAINGMLSSLDPHSS
FMNAKDANDMRTQTKGEFGGLGIEVTMENELVKVISPMDDTPASRAGILAGDYISEIDGTPVRGLKLEQAVEKMRGAVKT
PIKLTVIRKGADKPLEFTVVRDVIAVRAVKSRVEGDNVGYLRVISFTEKTYDDLEKAIKKIKADVPADKLKGYVLDLRLN
PGGLLDQAINVSDAFLERGEVVSTRGRNPDETRRFNATAGDLTDGKPVIVLVNGGSASASEIVAGALQDLRRATVVGTRS
FGKGSVQTIIPLGEAGALRLTTALYYTPSGKSIQGTGIEPDIKVEQPLPAELQGRVTAEGESSLSGHIKGQSETDEGSGS
SAYVPPEAKDDIQLNYALDLLRGAKTDPSFPPNPDKAVVNKQ
>Mature_442_residues
MIRKVSLLLIGGLMGATAMSVIYSASMPAQAAGPSTYKELSIFGDVFERVRAQYVTPPDDEKLVENAINGMLSSLDPHSS
FMNAKDANDMRTQTKGEFGGLGIEVTMENELVKVISPMDDTPASRAGILAGDYISEIDGTPVRGLKLEQAVEKMRGAVKT
PIKLTVIRKGADKPLEFTVVRDVIAVRAVKSRVEGDNVGYLRVISFTEKTYDDLEKAIKKIKADVPADKLKGYVLDLRLN
PGGLLDQAINVSDAFLERGEVVSTRGRNPDETRRFNATAGDLTDGKPVIVLVNGGSASASEIVAGALQDLRRATVVGTRS
FGKGSVQTIIPLGEAGALRLTTALYYTPSGKSIQGTGIEPDIKVEQPLPAELQGRVTAEGESSLSGHIKGQSETDEGSGS
SAYVPPEAKDDIQLNYALDLLRGAKTDPSFPPNPDKAVVNKQ

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=328, Percent_Identity=28.9634146341463, Blast_Score=112, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 47146; Mature: 47146

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKVSLLLIGGLMGATAMSVIYSASMPAQAAGPSTYKELSIFGDVFERVRAQYVTPPDD
CCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH
EKLVENAINGMLSSLDPHSSFMNAKDANDMRTQTKGEFGGLGIEVTMENELVKVISPMDD
HHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHCCCCC
TPASRAGILAGDYISEIDGTPVRGLKLEQAVEKMRGAVKTPIKLTVIRKGADKPLEFTVV
CCCCCCCCEECHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHH
RDVIAVRAVKSRVEGDNVGYLRVISFTEKTYDDLEKAIKKIKADVPADKLKGYVLDLRLN
HHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEC
PGGLLDQAINVSDAFLERGEVVSTRGRNPDETRRFNATAGDLTDGKPVIVLVNGGSASAS
CCCHHHHHCCHHHHHHHCCCEEECCCCCCCHHHEECCCCCCCCCCCEEEEEEECCCCCHH
EIVAGALQDLRRATVVGTRSFGKGSVQTIIPLGEAGALRLTTALYYTPSGKSIQGTGIEP
HHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCEEECCCCCC
DIKVEQPLPAELQGRVTAEGESSLSGHIKGQSETDEGSGSSAYVPPEAKDDIQLNYALDL
CCEECCCCCHHHCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHH
LRGAKTDPSFPPNPDKAVVNKQ
HHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRKVSLLLIGGLMGATAMSVIYSASMPAQAAGPSTYKELSIFGDVFERVRAQYVTPPDD
CCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH
EKLVENAINGMLSSLDPHSSFMNAKDANDMRTQTKGEFGGLGIEVTMENELVKVISPMDD
HHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHCCCCC
TPASRAGILAGDYISEIDGTPVRGLKLEQAVEKMRGAVKTPIKLTVIRKGADKPLEFTVV
CCCCCCCCEECHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCEEHHHH
RDVIAVRAVKSRVEGDNVGYLRVISFTEKTYDDLEKAIKKIKADVPADKLKGYVLDLRLN
HHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEC
PGGLLDQAINVSDAFLERGEVVSTRGRNPDETRRFNATAGDLTDGKPVIVLVNGGSASAS
CCCHHHHHCCHHHHHHHCCCEEECCCCCCCHHHEECCCCCCCCCCCEEEEEEECCCCCHH
EIVAGALQDLRRATVVGTRSFGKGSVQTIIPLGEAGALRLTTALYYTPSGKSIQGTGIEP
HHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCCEEEEEEEEECCCCCEEECCCCCC
DIKVEQPLPAELQGRVTAEGESSLSGHIKGQSETDEGSGSSAYVPPEAKDDIQLNYALDL
CCEECCCCCHHHCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHH
LRGAKTDPSFPPNPDKAVVNKQ
HHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]