Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is bfr [H]
Identifier: 159185372
GI number: 159185372
Start: 2776477
End: 2776986
Strand: Direct
Name: bfr [H]
Synonym: Atu2771
Alternate gene names: 159185372
Gene position: 2776477-2776986 (Clockwise)
Preceding gene: 159185371
Following gene: 159185381
Centisome position: 97.71
GC content: 52.94
Gene sequence:
>510_bases ATGAAGAGAACAGGAGAGCGGACATTGAAAGGCGACACAAAAGTCATCGAGCGGCTTAACGAAGCCCTTTTTCTAGAACT CGGTGCAGTAAACCAGTATTGGCTTCACTACCGGCTTCTGAATGATTGGGGTTTCACCAAGCTCGCAAAGAAGGAGCGTG CCGAATCCATCGAAGAGATGCAGCACGCCGACAAGATCATTGATCGTATTATCTTCCTGGAAGGTCATCCCAACCTCCAG ACTCTGGCTCCGCTGCGCATCGGCCAGAACGTCAAGGAAGTGCTTGAAGCCGACCTGGCTGGCGAATATGACGCACGGAC TTCCTACAAGAAATCGCGTGATATCTGTTCCGAGGCTGGAGACTACGTCTCCATGAAGCTGTTCGAAGCCCTGCTGATCG ACGAGGAAGGCCATATCGACTTCCTCGAAACCCAGCTCGAGCTGCTCGGCAAGATCGGCGCGGAAAAATACGGCCAGCTC AACGCCGATTCTGCCAACGAAGCGGAATAA
Upstream 100 bases:
>100_bases GTTGTCGACCTGATCATCAAAACCACGGAAGAATATCACGCCCGTCGCCACTCGACTGAGGCTGATGTTTTTGATTTTAT GTCCCGCTTGAAGCGATTCC
Downstream 100 bases:
>100_bases GCACTGGCGCCAGAACGAAAAAGGCGGCCTTGGCCGCCTTTTTTATTTGCCCGAAAGGTGCTGGAACTCTGCCACGACCT TTTCATAGACCGCCCGCTTG
Product: bacterioferritin
Products: NA
Alternate protein names: BFR [H]
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKRTGERTLKGDTKVIERLNEALFLELGAVNQYWLHYRLLNDWGFTKLAKKERAESIEEMQHADKIIDRIIFLEGHPNLQ TLAPLRIGQNVKEVLEADLAGEYDARTSYKKSRDICSEAGDYVSMKLFEALLIDEEGHIDFLETQLELLGKIGAEKYGQL NADSANEAE
Sequences:
>Translated_169_residues MKRTGERTLKGDTKVIERLNEALFLELGAVNQYWLHYRLLNDWGFTKLAKKERAESIEEMQHADKIIDRIIFLEGHPNLQ TLAPLRIGQNVKEVLEADLAGEYDARTSYKKSRDICSEAGDYVSMKLFEALLIDEEGHIDFLETQLELLGKIGAEKYGQL NADSANEAE >Mature_169_residues MKRTGERTLKGDTKVIERLNEALFLELGAVNQYWLHYRLLNDWGFTKLAKKERAESIEEMQHADKIIDRIIFLEGHPNLQ TLAPLRIGQNVKEVLEADLAGEYDARTSYKKSRDICSEAGDYVSMKLFEALLIDEEGHIDFLETQLELLGKIGAEKYGQL NADSANEAE
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=151, Percent_Identity=49.6688741721854, Blast_Score=145, Evalue=2e-36,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 19286; Mature: 19286
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTGERTLKGDTKVIERLNEALFLELGAVNQYWLHYRLLNDWGFTKLAKKERAESIEEM CCCCCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH QHADKIIDRIIFLEGHPNLQTLAPLRIGQNVKEVLEADLAGEYDARTSYKKSRDICSEAG HHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC DYVSMKLFEALLIDEEGHIDFLETQLELLGKIGAEKYGQLNADSANEAE CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCC >Mature Secondary Structure MKRTGERTLKGDTKVIERLNEALFLELGAVNQYWLHYRLLNDWGFTKLAKKERAESIEEM CCCCCCCHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH QHADKIIDRIIFLEGHPNLQTLAPLRIGQNVKEVLEADLAGEYDARTSYKKSRDICSEAG HHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC DYVSMKLFEALLIDEEGHIDFLETQLELLGKIGAEKYGQLNADSANEAE CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7698330; 11756688 [H]