Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185370
Identifier: 159185370
GI number: 159185370
Start: 2773061
End: 2773636
Strand: Reverse
Name: 159185370
Synonym: Atu2768
Alternate gene names: NA
Gene position: 2773636-2773061 (Counterclockwise)
Preceding gene: 159185373
Following gene: 15890014
Centisome position: 97.61
GC content: 55.73
Gene sequence:
>576_bases ATGGCGAAACACGACGGCGAAACAATCATTAAAAAATATGCCAACCGGCGGCTCTATAATACCGGCACGAGCACGTATGT GACGCTCGACGACCTGGCGCAGATGGTCAAGCGCGGCGAGGACTTCAAGGTTCAGGACGCCAAGTCGTCTGAGGATATCA CCCACGCGGTGCTGACGCAGATCATCGTTGAGCAAGAAGCCAAAACCGGCAATACGCTGCTGCCGACGGCGTTTCTGCGG CAATTGATTTCCTATTACGGTGACCAGATGCAGATGGTCGTGCCGACATTTCTCGAACATTCGATGAAGACCTTCTCCGA TCAGCAGAGCCAGATGCAGGAGCATATGGCCAAGGCTTTCGGTGACGGTTCGCTTGCCCGCAACTTCCAGGCACCGCTGC AGATGATGGAAGAGCAGATTCGCCGCAACACGGAACTGTTCCGGCAGGCGATGCAGGGTTTTACGCCTTTCGCAATGCCA CAGGCGCCGAAGGAAACCCGCAAGCCGAATGCATCCGAAATCGATGAGCTGAAGGCGCAGCTGCGCGCATTGCAGCAAAA ACTCGACCAGCTCTGA
Upstream 100 bases:
>100_bases CAAAACATTTGTCAGACAGCGTATTTTGCGCATACACTTTGCGCCGGGAAGAGCAAGAAAAACAAAAACAAGAAAATACC ATCATCGCGAGGAGGCGGGC
Downstream 100 bases:
>100_bases TCCTGTCTTTCGGGCCGATGCTGGATTGAACAACCGCATCGGCTGCTGCTCCAGACTTTCAGCCTGCCGTTCTTTCCGGC ACGCGCAGCAACAGCAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF4 [H]
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MAKHDGETIIKKYANRRLYNTGTSTYVTLDDLAQMVKRGEDFKVQDAKSSEDITHAVLTQIIVEQEAKTGNTLLPTAFLR QLISYYGDQMQMVVPTFLEHSMKTFSDQQSQMQEHMAKAFGDGSLARNFQAPLQMMEEQIRRNTELFRQAMQGFTPFAMP QAPKETRKPNASEIDELKAQLRALQQKLDQL
Sequences:
>Translated_191_residues MAKHDGETIIKKYANRRLYNTGTSTYVTLDDLAQMVKRGEDFKVQDAKSSEDITHAVLTQIIVEQEAKTGNTLLPTAFLR QLISYYGDQMQMVVPTFLEHSMKTFSDQQSQMQEHMAKAFGDGSLARNFQAPLQMMEEQIRRNTELFRQAMQGFTPFAMP QAPKETRKPNASEIDELKAQLRALQQKLDQL >Mature_190_residues AKHDGETIIKKYANRRLYNTGTSTYVTLDDLAQMVKRGEDFKVQDAKSSEDITHAVLTQIIVEQEAKTGNTLLPTAFLRQ LISYYGDQMQMVVPTFLEHSMKTFSDQQSQMQEHMAKAFGDGSLARNFQAPLQMMEEQIRRNTELFRQAMQGFTPFAMPQ APKETRKPNASEIDELKAQLRALQQKLDQL
Specific function: Unknown
COG id: COG5394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012909 - InterPro: IPR010134 - InterPro: IPR007897 [H]
Pfam domain/function: PF05233 PHB_acc; PF07879 PHB_acc_N [H]
EC number: NA
Molecular weight: Translated: 21866; Mature: 21735
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKHDGETIIKKYANRRLYNTGTSTYVTLDDLAQMVKRGEDFKVQDAKSSEDITHAVLTQ CCCCCHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH IIVEQEAKTGNTLLPTAFLRQLISYYGDQMQMVVPTFLEHSMKTFSDQQSQMQEHMAKAF HHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GDGSLARNFQAPLQMMEEQIRRNTELFRQAMQGFTPFAMPQAPKETRKPNASEIDELKAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHH LRALQQKLDQL HHHHHHHHHCC >Mature Secondary Structure AKHDGETIIKKYANRRLYNTGTSTYVTLDDLAQMVKRGEDFKVQDAKSSEDITHAVLTQ CCCCHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH IIVEQEAKTGNTLLPTAFLRQLISYYGDQMQMVVPTFLEHSMKTFSDQQSQMQEHMAKAF HHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GDGSLARNFQAPLQMMEEQIRRNTELFRQAMQGFTPFAMPQAPKETRKPNASEIDELKAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHH LRALQQKLDQL HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7763384 [H]