Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185368
Identifier: 159185368
GI number: 159185368
Start: 2763618
End: 2764073
Strand: Reverse
Name: 159185368
Synonym: Atu2762
Alternate gene names: NA
Gene position: 2764073-2763618 (Counterclockwise)
Preceding gene: 15890012
Following gene: 159185363
Centisome position: 97.27
GC content: 59.21
Gene sequence:
>456_bases ATGGCCTTGACGGACGATATTATTCTGCTGGGGCAAGTGCCGTTATTTGCGGGGTTCAGCGACGATCAGTTGCGGCTTAT CGCCTTCGGTGCGGAACGCCGCCGTGTATCGGCCGGGCAGATATTGTTCCGGGAACATTCGCCGGCTGAATGCGCCTTTG CCGTGACATCGGGGCATTTCGAACTGTTCACCGCCGGGCGGGATGGCAAACCCCTGTTGCAGGCGACGCCCGGCAAGGGT GCGCTGCTTTCGGAGCTCGCGCTTTTCACCCTTTGTGAAAGAAAGTTTACTGCCGTTGCAGTGGAAGATTCCGAAGTCAT CCGGATAACGCGCATCCTCTTTCACCGGCTGGTGGAGGAGTTTCCTGAGGTCGCCGATATCGTGTCGGCGCGTATTCGCG ACAATATTGCGGCGCTGGCGGCGGGTGCAGCCCGTTTGCAGAACCGCTTCGTCTGA
Upstream 100 bases:
>100_bases TCCTGAAAGGATGCGCGGCGTTTCAACGTCTTGTATTTTGACGACCGATATTGGAAAACCGCTATAGTGATGCAGGCGGC TTTCCGGAGTAGTGATCGAC
Downstream 100 bases:
>100_bases AGCCGGCTCTAGCGTTCAGAAGCGGAAATGAGCCGTGACGGGGACGTGGTCCGATGGCCGGTTCCAGCCGCGGGCTTCAC GCAATATCTCGATTTTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator Crp/Fnr Family
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MALTDDIILLGQVPLFAGFSDDQLRLIAFGAERRRVSAGQILFREHSPAECAFAVTSGHFELFTAGRDGKPLLQATPGKG ALLSELALFTLCERKFTAVAVEDSEVIRITRILFHRLVEEFPEVADIVSARIRDNIAALAAGAARLQNRFV
Sequences:
>Translated_151_residues MALTDDIILLGQVPLFAGFSDDQLRLIAFGAERRRVSAGQILFREHSPAECAFAVTSGHFELFTAGRDGKPLLQATPGKG ALLSELALFTLCERKFTAVAVEDSEVIRITRILFHRLVEEFPEVADIVSARIRDNIAALAAGAARLQNRFV >Mature_150_residues ALTDDIILLGQVPLFAGFSDDQLRLIAFGAERRRVSAGQILFREHSPAECAFAVTSGHFELFTAGRDGKPLLQATPGKGA LLSELALFTLCERKFTAVAVEDSEVIRITRILFHRLVEEFPEVADIVSARIRDNIAALAAGAARLQNRFV
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16524; Mature: 16393
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTDDIILLGQVPLFAGFSDDQLRLIAFGAERRRVSAGQILFREHSPAECAFAVTSGHF CCCCCCEEEEECCCEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCE ELFTAGRDGKPLLQATPGKGALLSELALFTLCERKFTAVAVEDSEVIRITRILFHRLVEE EEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHH FPEVADIVSARIRDNIAALAAGAARLQNRFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALTDDIILLGQVPLFAGFSDDQLRLIAFGAERRRVSAGQILFREHSPAECAFAVTSGHF CCCCCEEEEECCCEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEECCCE ELFTAGRDGKPLLQATPGKGALLSELALFTLCERKFTAVAVEDSEVIRITRILFHRLVEE EEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHH FPEVADIVSARIRDNIAALAAGAARLQNRFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA