Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185367
Identifier: 159185367
GI number: 159185367
Start: 2761964
End: 2762638
Strand: Direct
Name: 159185367
Synonym: Atu2760
Alternate gene names: NA
Gene position: 2761964-2762638 (Clockwise)
Preceding gene: 159185366
Following gene: 15890010
Centisome position: 97.2
GC content: 56.59
Gene sequence:
>675_bases ATGAACGATCTGACCACCGGCGAAACGGCCAATGCAAGCACTACGCAAAATGGCGTGACGCGGCGTGGGGTGCTGACGGC ATTTTCCATGGCTGCGGTGATCGCCGGCCTGTCGCCGCTTAACGCATTTGCCCAAGCAGCCGGCAATGGCGCAACCGCGC AGAAAATCGCCAATCACTTCTCTTCGGTCAAAACCATGATGGGCGAATTCGTGCAGTTCGGCCCGCGCGGGGAACAGACC GGCGGCAAGTTCTACATTGAACGGCCCGGCAAGCTTCGCTTCAATTACGAAGACCCCTCGCCCATGCGCGTCATCTCCGA TGGCAAGAATGTCGTCATCGGCAACATGAAGCTGAAGACATGGGATCTCTATCCGCTGTCGAAGACCCCGCTCAGCCTGC TTCTCTCCGACAAGATCGATCTCGGCAACCAGAAGGTCCGGGATGTGAAGGAAGAATCCGACCTGACCACCATTGTCCTC GGCGACAAGAGCGTGTTCGGCGATTCGACCATTACCCTGATGTTCGATCCGAAAACTTTCGATCTGAGGCAATGGACGAC GACCGACGCCCAGAACAAGGACACGACAGTCATGATCTTCAACGTCCAGACGGGCGTGAACCTCGATGAACGTGTCTTCA ACATCAATTATGAGGAAGTGCGCAAGCGCGGCTGA
Upstream 100 bases:
>100_bases AATCCGCAACCAAGCGGGGCTGCGAAGCGTTACTACACGCTTTCACGTCATGAAGCCGCCGCCTTTTATGCGGACAATCG CTGCGATGAAGGAGAACAGA
Downstream 100 bases:
>100_bases CGCTGCTCGCCCATACAAGCTCTTTAAAAGGCGGCTCTCAGGTCGCCTTTTTTATTTTGCCGCTAAAATACATTCCCGTT TTCATCGCGATGTTATAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein Carrier Protein; LolA Type Protein; Outer Membrane Lipoprotein-Sorting Protein; Outer Membrane Lipoproteins Carrier Protein; Outer-Membrane Lipoproteins Carrier Protein; Outer-Membrane Lipoprotein Carrier Protein; Signal Peptide; LolA Family Protein; LolA Family Outer Membrane Lipoprotein Carrier Protein; Outer Membrane Lipoprotein Carrier Protein LolA Family
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MNDLTTGETANASTTQNGVTRRGVLTAFSMAAVIAGLSPLNAFAQAAGNGATAQKIANHFSSVKTMMGEFVQFGPRGEQT GGKFYIERPGKLRFNYEDPSPMRVISDGKNVVIGNMKLKTWDLYPLSKTPLSLLLSDKIDLGNQKVRDVKEESDLTTIVL GDKSVFGDSTITLMFDPKTFDLRQWTTTDAQNKDTTVMIFNVQTGVNLDERVFNINYEEVRKRG
Sequences:
>Translated_224_residues MNDLTTGETANASTTQNGVTRRGVLTAFSMAAVIAGLSPLNAFAQAAGNGATAQKIANHFSSVKTMMGEFVQFGPRGEQT GGKFYIERPGKLRFNYEDPSPMRVISDGKNVVIGNMKLKTWDLYPLSKTPLSLLLSDKIDLGNQKVRDVKEESDLTTIVL GDKSVFGDSTITLMFDPKTFDLRQWTTTDAQNKDTTVMIFNVQTGVNLDERVFNINYEEVRKRG >Mature_224_residues MNDLTTGETANASTTQNGVTRRGVLTAFSMAAVIAGLSPLNAFAQAAGNGATAQKIANHFSSVKTMMGEFVQFGPRGEQT GGKFYIERPGKLRFNYEDPSPMRVISDGKNVVIGNMKLKTWDLYPLSKTPLSLLLSDKIDLGNQKVRDVKEESDLTTIVL GDKSVFGDSTITLMFDPKTFDLRQWTTTDAQNKDTTVMIFNVQTGVNLDERVFNINYEEVRKRG
Specific function: Unknown
COG id: COG2834
COG function: function code M; Outer membrane lipoprotein-sorting protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24686; Mature: 24686
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLTTGETANASTTQNGVTRRGVLTAFSMAAVIAGLSPLNAFAQAAGNGATAQKIANHF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH SSVKTMMGEFVQFGPRGEQTGGKFYIERPGKLRFNYEDPSPMRVISDGKNVVIGNMKLKT HHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEEECCCEEEEECEEEEE WDLYPLSKTPLSLLLSDKIDLGNQKVRDVKEESDLTTIVLGDKSVFGDSTITLMFDPKTF EEECCCCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCC DLRQWTTTDAQNKDTTVMIFNVQTGVNLDERVFNINYEEVRKRG CCEEECCCCCCCCCCEEEEEEECCCCCCCHHEEECCHHHHHHCC >Mature Secondary Structure MNDLTTGETANASTTQNGVTRRGVLTAFSMAAVIAGLSPLNAFAQAAGNGATAQKIANHF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH SSVKTMMGEFVQFGPRGEQTGGKFYIERPGKLRFNYEDPSPMRVISDGKNVVIGNMKLKT HHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCCEEEEECCCEEEEECEEEEE WDLYPLSKTPLSLLLSDKIDLGNQKVRDVKEESDLTTIVLGDKSVFGDSTITLMFDPKTF EEECCCCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCC DLRQWTTTDAQNKDTTVMIFNVQTGVNLDERVFNINYEEVRKRG CCEEECCCCCCCCCCEEEEEEECCCCCCCHHEEECCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA