Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is tesB [H]
Identifier: 159185364
GI number: 159185364
Start: 2756153
End: 2757037
Strand: Direct
Name: tesB [H]
Synonym: Atu2756
Alternate gene names: 159185364
Gene position: 2756153-2757037 (Clockwise)
Preceding gene: 15889999
Following gene: 15890006
Centisome position: 96.99
GC content: 59.77
Gene sequence:
>885_bases ATGTCGCATCCTTCGCAAACGTCAGACCCGATGGTCAATCTCATTGCCACGCTCGATCTCGAGAAGCTGGAAGAGAACCT CTATCGGGGCGAAAGCCCGCAGATCGGCTGGCAGCGGGTTTTTGGCGGCCAGGTCATCGCACAGGCCCTGATTGCCGCGC AAAGAACCGTGGATGACGACCGTTTCGTGCATTCGCTGCATGCTTATTTCATGCGCCCCGGCGATCCGCTGGTGCCTATC GTCTACCAGGTGGAGCGCATCCGCGACGGCGCAAGCTTCTGCACCCGCCGCGTGGTCGCCATCCAGCACGGCAAGGCGAT TTTTTCCATGTCGGCGTCATTTCAGATCTTGGAGGACGGCTTCGACCATCAGATCAAGATGCCTGATGTGACGCCGCCTG AAAAACTGATGAGCGAGGAGCAGATGCAGGCGGCCTTCCTCGCCAAGGCGCCCGCATCGATCCGTAAATACTGGAGCAAC AAGCGGCCGATCGAGATAAGGCCGGTTTCGCTGACCCATTACATCTCGAAGGAAAAGCTGGAGCCGCAGCAGGATATCTG GGTTCGCGCCGTCGGCGAGGTGCCTGCTGATCCGCGTCTGCAATCGGCCATTCTCGCCTACCTCTCGGACATGACGCTGC TCGACACCTCGCTTTATGCCCATGGAACGACGATCTTCGATCCATCCATTCAGGTGGCGAGTCTCGACCACGCCATGTGG TTCCACCGCCCCTGCCGGCTGGATGACTGGCTGCTCTACACCCAGGACAGCCCCAGCGCGTCCGGCGCACGGGGGCTCAC CCGTGGCAATATTTTCACCAGGCAGGGTGAACTCGTCGCCTCCGTTGCGCAGGAGGGTTTGATCCGCAAAAGGGCAAATG ATTAA
Upstream 100 bases:
>100_bases ACCACGTCGAGCATCGCGCTTCTCCTCAAATCTTGTGCACACATCATCGGCACACTATAGACCATGTGACGTCTTCCTAC AGCCGGAGCAGGCCGAAAAA
Downstream 100 bases:
>100_bases ATAATACGCTTTTTTAAAAAATCGCACATTTTATAGACGCTTTTTTGGGCGACAAATGCCCCTTTTTCAGACGCCCGTCA TATAATCTTTATATTTCAAT
Product: acyl-CoA thioesterase II
Products: Hydrolyzed acyl-CoA thioesters [C]
Alternate protein names: Acyl-CoA thioesterase II; TEII [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSHPSQTSDPMVNLIATLDLEKLEENLYRGESPQIGWQRVFGGQVIAQALIAAQRTVDDDRFVHSLHAYFMRPGDPLVPI VYQVERIRDGASFCTRRVVAIQHGKAIFSMSASFQILEDGFDHQIKMPDVTPPEKLMSEEQMQAAFLAKAPASIRKYWSN KRPIEIRPVSLTHYISKEKLEPQQDIWVRAVGEVPADPRLQSAILAYLSDMTLLDTSLYAHGTTIFDPSIQVASLDHAMW FHRPCRLDDWLLYTQDSPSASGARGLTRGNIFTRQGELVASVAQEGLIRKRAND
Sequences:
>Translated_294_residues MSHPSQTSDPMVNLIATLDLEKLEENLYRGESPQIGWQRVFGGQVIAQALIAAQRTVDDDRFVHSLHAYFMRPGDPLVPI VYQVERIRDGASFCTRRVVAIQHGKAIFSMSASFQILEDGFDHQIKMPDVTPPEKLMSEEQMQAAFLAKAPASIRKYWSN KRPIEIRPVSLTHYISKEKLEPQQDIWVRAVGEVPADPRLQSAILAYLSDMTLLDTSLYAHGTTIFDPSIQVASLDHAMW FHRPCRLDDWLLYTQDSPSASGARGLTRGNIFTRQGELVASVAQEGLIRKRAND >Mature_293_residues SHPSQTSDPMVNLIATLDLEKLEENLYRGESPQIGWQRVFGGQVIAQALIAAQRTVDDDRFVHSLHAYFMRPGDPLVPIV YQVERIRDGASFCTRRVVAIQHGKAIFSMSASFQILEDGFDHQIKMPDVTPPEKLMSEEQMQAAFLAKAPASIRKYWSNK RPIEIRPVSLTHYISKEKLEPQQDIWVRAVGEVPADPRLQSAILAYLSDMTLLDTSLYAHGTTIFDPSIQVASLDHAMWF HRPCRLDDWLLYTQDSPSASGARGLTRGNIFTRQGELVASVAQEGLIRKRAND
Specific function: Can hydrolyze a broad range of acyl-CoA thioesters. Its physiological function is not known [H]
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C/M/P thioester hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI34577075, Length=289, Percent_Identity=41.522491349481, Blast_Score=229, Evalue=3e-60, Organism=Escherichia coli, GI1786657, Length=270, Percent_Identity=48.5185185185185, Blast_Score=281, Evalue=3e-77, Organism=Caenorhabditis elegans, GI71988741, Length=302, Percent_Identity=39.4039735099338, Blast_Score=207, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17558508, Length=317, Percent_Identity=37.8548895899054, Blast_Score=183, Evalue=7e-47, Organism=Caenorhabditis elegans, GI115532456, Length=273, Percent_Identity=36.996336996337, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17531885, Length=273, Percent_Identity=36.996336996337, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17531889, Length=274, Percent_Identity=37.2262773722628, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI212645202, Length=287, Percent_Identity=33.7979094076655, Blast_Score=140, Evalue=6e-34, Organism=Caenorhabditis elegans, GI71982224, Length=298, Percent_Identity=33.5570469798658, Blast_Score=138, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6322480, Length=304, Percent_Identity=27.3026315789474, Blast_Score=105, Evalue=9e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003703 [H]
Pfam domain/function: PF02551 Acyl_CoA_thio [H]
EC number: 3.1.2.- [C]
Molecular weight: Translated: 33130; Mature: 32999
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPSQTSDPMVNLIATLDLEKLEENLYRGESPQIGWQRVFGGQVIAQALIAAQRTVDDD CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH RFVHSLHAYFMRPGDPLVPIVYQVERIRDGASFCTRRVVAIQHGKAIFSMSASFQILEDG HHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHEECCCEEEEECCCHHHHHCC FDHQIKMPDVTPPEKLMSEEQMQAAFLAKAPASIRKYWSNKRPIEIRPVSLTHYISKEKL CCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECHHHHHHHHHHC EPQQDIWVRAVGEVPADPRLQSAILAYLSDMTLLDTSLYAHGTTIFDPSIQVASLDHAMW CCCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECHHHHH FHRPCRLDDWLLYTQDSPSASGARGLTRGNIFTRQGELVASVAQEGLIRKRAND HCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SHPSQTSDPMVNLIATLDLEKLEENLYRGESPQIGWQRVFGGQVIAQALIAAQRTVDDD CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH RFVHSLHAYFMRPGDPLVPIVYQVERIRDGASFCTRRVVAIQHGKAIFSMSASFQILEDG HHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHEECCCEEEEECCCHHHHHCC FDHQIKMPDVTPPEKLMSEEQMQAAFLAKAPASIRKYWSNKRPIEIRPVSLTHYISKEKL CCCEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEECHHHHHHHHHHC EPQQDIWVRAVGEVPADPRLQSAILAYLSDMTLLDTSLYAHGTTIFDPSIQVASLDHAMW CCCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECHHHHH FHRPCRLDDWLLYTQDSPSASGARGLTRGNIFTRQGELVASVAQEGLIRKRAND HCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA thioesters [C]
Specific reaction: Hydrolyzes a broad range of acyl-CoA thioesters [C]
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]