Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159185352

Identifier: 159185352

GI number: 159185352

Start: 2718217

End: 2718504

Strand: Reverse

Name: 159185352

Synonym: Atu2729

Alternate gene names: NA

Gene position: 2718504-2718217 (Counterclockwise)

Preceding gene: 159185353

Following gene: 159185350

Centisome position: 95.67

GC content: 51.74

Gene sequence:

>288_bases
ATGGGTCTCTCGATGACATCGGTGGGTCAGGGAGGAGGAGCTTTGCAGTTCAGCGCGTCTTTCACAGAAACCGCCCTGTT
GGCGTCGCTCGCCATTCTTTCCCTGGCGTTGTCGTGCTGGTTGGCACGCTATCCTCGCAAAACGAGCGTTGGAATCATGC
TCGGCGTGCTTCTCGGAATTTTTGTATTCAACGTCGCAGCAGGTTTTGTTGCCTTCCTGGGAAATGTTCTTCCCTTCGGG
CAGATAGATTTTTGGCTATCAAACTTTTTGACCGGAATTTTCCGATAG

Upstream 100 bases:

>100_bases
AGACAGCGGTCGCAAGCATGCCAAGCCCTAAAGATGTTCCACGACAGGAAGCCGGCATGTATGGTCCTTTTTAGAAAACG
ACCGTAACACTGGAGTCCCC

Downstream 100 bases:

>100_bases
GCAATTCCTGGCTCACCCGGTCCCCGGAAAGCGGGCAAAGAAAAAGGGCGGACAATGCTGCCCGCCCTTATCTTTGTTGC
CTCGGCCAAGGCCTCAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MGLSMTSVGQGGGALQFSASFTETALLASLAILSLALSCWLARYPRKTSVGIMLGVLLGIFVFNVAAGFVAFLGNVLPFG
QIDFWLSNFLTGIFR

Sequences:

>Translated_95_residues
MGLSMTSVGQGGGALQFSASFTETALLASLAILSLALSCWLARYPRKTSVGIMLGVLLGIFVFNVAAGFVAFLGNVLPFG
QIDFWLSNFLTGIFR
>Mature_94_residues
GLSMTSVGQGGGALQFSASFTETALLASLAILSLALSCWLARYPRKTSVGIMLGVLLGIFVFNVAAGFVAFLGNVLPFGQ
IDFWLSNFLTGIFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10039; Mature: 9908

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSMTSVGQGGGALQFSASFTETALLASLAILSLALSCWLARYPRKTSVGIMLGVLLGI
CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FVFNVAAGFVAFLGNVLPFGQIDFWLSNFLTGIFR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLSMTSVGQGGGALQFSASFTETALLASLAILSLALSCWLARYPRKTSVGIMLGVLLGI
CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FVFNVAAGFVAFLGNVLPFGQIDFWLSNFLTGIFR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA