Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is metA
Identifier: 159185345
GI number: 159185345
Start: 2703611
End: 2704537
Strand: Direct
Name: metA
Synonym: Atu2718
Alternate gene names: 159185345
Gene position: 2703611-2704537 (Clockwise)
Preceding gene: 159185339
Following gene: 15889971
Centisome position: 95.14
GC content: 55.02
Gene sequence:
>927_bases ATGCCGATCAAGATTCCCGATACCCTTCCCGCCTTTGAGACCCTCGTTCATGAGGGTGTGCGGGTCATGACCGAAACGGC GGCCATCCGGCAGGATATTCGCCCGCTCCAGATCGGGCTTCTGAACCTCATGCCGAACAAGATCAAGACGGAAATCCAGA TGGCGCGTCTTGTTGGCGCCTCGCCGCTGCAGGTGGAATTGTCGCTCATCCGCATCGGCGGTCACCGCGCCAAGAATACG CCGGAAGAACATCTCCTCTCCTTCTACCAGACCTGGGAAGAGGTCCGTCACCGCAAGTTCGACGGCTTCATCATCACCGG CGCACCGATCGAACTGCTAGATTATGAAGATGTGACTTACTGGAACGAGATGCAGCAGATTTTCGAATGGACGCAGACCA ACGTCCATTCGACTCTGAATGTCTGCTGGGGCGCAATGGCCGCCATCTACCATTTCCACGGGGTGCCGAAATACGAGTTG AAGGAAAAGGCTTTCGGGGTTTATCGCCACCGCAACCTTAGCCCCTCATCGATTTACCTTAACGGTTTTTCAGACGATTT TCAGGTTCCGGTGTCGCGTTGGACGGAAGTGCGCCGCGCCGATATCGAAAAACACCCCGAGCTGGAAATCCTGATGGAGT CCGACGAGATGGGCGTGTGCCTGGCGCATGAGAAAGCCGGAAATCGGCTCTATATGTTTAACCACGTTGAATATGATTCC ACTTCGCTTGCGGATGAATATTTCCGTGATGTGAACTCCGGTGTCCCCATCAAGCTGCCGCATGATTATTTTCCCCACAA TGATCCGGAGCTTGCCCCGCTGAACCGCTGGCGCAGCCACGCCCATCTGTTTTTCGGAAACTGGATCAACGAGATATACC AGACGACGCCTTATGACCCCCAAGCCATCGGGAAACTGGCGGCGTAA
Upstream 100 bases:
>100_bases GTCGAGGAAAAGGGCAATTTCCTGGGACCGGCCGCGATTTCGCTGCCGGTTTTTTTGTTTTCGCAACGTTCTTTACGTGA TCCGGAAAAGAGAGTTCGAC
Downstream 100 bases:
>100_bases ACTGCGGGATTGCGAATTGCCGGAAAATGACGCAACGTCCGCCCGGCAATTTGCGATACCAGGGAGAATGACGAGATGAG CGACGGTGCGGCACGAGAAG
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MPIKIPDTLPAFETLVHEGVRVMTETAAIRQDIRPLQIGLLNLMPNKIKTEIQMARLVGASPLQVELSLIRIGGHRAKNT PEEHLLSFYQTWEEVRHRKFDGFIITGAPIELLDYEDVTYWNEMQQIFEWTQTNVHSTLNVCWGAMAAIYHFHGVPKYEL KEKAFGVYRHRNLSPSSIYLNGFSDDFQVPVSRWTEVRRADIEKHPELEILMESDEMGVCLAHEKAGNRLYMFNHVEYDS TSLADEYFRDVNSGVPIKLPHDYFPHNDPELAPLNRWRSHAHLFFGNWINEIYQTTPYDPQAIGKLAA
Sequences:
>Translated_308_residues MPIKIPDTLPAFETLVHEGVRVMTETAAIRQDIRPLQIGLLNLMPNKIKTEIQMARLVGASPLQVELSLIRIGGHRAKNT PEEHLLSFYQTWEEVRHRKFDGFIITGAPIELLDYEDVTYWNEMQQIFEWTQTNVHSTLNVCWGAMAAIYHFHGVPKYEL KEKAFGVYRHRNLSPSSIYLNGFSDDFQVPVSRWTEVRRADIEKHPELEILMESDEMGVCLAHEKAGNRLYMFNHVEYDS TSLADEYFRDVNSGVPIKLPHDYFPHNDPELAPLNRWRSHAHLFFGNWINEIYQTTPYDPQAIGKLAA >Mature_307_residues PIKIPDTLPAFETLVHEGVRVMTETAAIRQDIRPLQIGLLNLMPNKIKTEIQMARLVGASPLQVELSLIRIGGHRAKNTP EEHLLSFYQTWEEVRHRKFDGFIITGAPIELLDYEDVTYWNEMQQIFEWTQTNVHSTLNVCWGAMAAIYHFHGVPKYELK EKAFGVYRHRNLSPSSIYLNGFSDDFQVPVSRWTEVRRADIEKHPELEILMESDEMGVCLAHEKAGNRLYMFNHVEYDST SLADEYFRDVNSGVPIKLPHDYFPHNDPELAPLNRWRSHAHLFFGNWINEIYQTTPYDPQAIGKLAA
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family
Homologues:
Organism=Escherichia coli, GI1790443, Length=300, Percent_Identity=46, Blast_Score=286, Evalue=1e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): META_AGRT5 (Q7CWE8)
Other databases:
- EMBL: AE007869 - RefSeq: NP_355651.2 - HSSP: Q72X44 - ProteinModelPortal: Q7CWE8 - SMR: Q7CWE8 - STRING: Q7CWE8 - GeneID: 1134756 - GenomeReviews: AE007869_GR - KEGG: atu:Atu2718 - eggNOG: COG1897 - HOGENOM: HBG362506 - OMA: QAGLYYH - PhylomeDB: Q7CWE8 - ProtClustDB: PRK05368 - GO: GO:0005737 - HAMAP: MF_00295 - InterPro: IPR005697 - PANTHER: PTHR20919 - PIRSF: PIRSF000450 - ProDom: PD037892 - TIGRFAMs: TIGR01001
Pfam domain/function: PF04204 HTS
EC number: =2.3.1.46
Molecular weight: Translated: 35691; Mature: 35560
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: ACT_SITE 142-142
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKIPDTLPAFETLVHEGVRVMTETAAIRQDIRPLQIGLLNLMPNKIKTEIQMARLVGA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCC SPLQVELSLIRIGGHRAKNTPEEHLLSFYQTWEEVRHRKFDGFIITGAPIELLDYEDVTY CCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCHH WNEMQQIFEWTQTNVHSTLNVCWGAMAAIYHFHGVPKYELKEKAFGVYRHRNLSPSSIYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEE NGFSDDFQVPVSRWTEVRRADIEKHPELEILMESDEMGVCLAHEKAGNRLYMFNHVEYDS ECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCC TSLADEYFRDVNSGVPIKLPHDYFPHNDPELAPLNRWRSHAHLFFGNWINEIYQTTPYDP HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH QAIGKLAA HHHHHCCC >Mature Secondary Structure PIKIPDTLPAFETLVHEGVRVMTETAAIRQDIRPLQIGLLNLMPNKIKTEIQMARLVGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCC SPLQVELSLIRIGGHRAKNTPEEHLLSFYQTWEEVRHRKFDGFIITGAPIELLDYEDVTY CCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCHH WNEMQQIFEWTQTNVHSTLNVCWGAMAAIYHFHGVPKYELKEKAFGVYRHRNLSPSSIYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEE NGFSDDFQVPVSRWTEVRRADIEKHPELEILMESDEMGVCLAHEKAGNRLYMFNHVEYDS ECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCC TSLADEYFRDVNSGVPIKLPHDYFPHNDPELAPLNRWRSHAHLFFGNWINEIYQTTPYDP HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH QAIGKLAA HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743194; 11743193