Click here to switch to the map view.

The map label for this gene is yfgC [H]

Identifier: 159185340

GI number: 159185340

Start: 2695052

End: 2696578

Strand: Reverse

Name: yfgC [H]

Synonym: Atu2710

Alternate gene names: 159185340

Gene position: 2696578-2695052 (Counterclockwise)

Preceding gene: 159185341

Following gene: 159185338

Centisome position: 94.9

GC content: 61.89

Gene sequence:

>1527_bases
ATGAAAAATAGCATGACTGCACAGCGGAGGCTTTTCTCCGGTTCAGGCCTTCGCCGTTCCGGGCGGCTTGCTGCGGCGTG
GTCCACGCTGACGGCGTCTGCCGTGCTGCTGTCATCGTGCCAGTCCCTGTTCAGCCCGGCCTACCAGTCCACATTGCGTC
CCTCTGACAATCCGCAGACCGTGGAGCAGGTGCAGAAGAATGATCCGCGTGCCCAGATGGGTGCACGCGAACATCCGCGC
ATCGTGGCAAGTTATGGCGGCGAATATCGCGATGCCAAGACGGAACGGCTGGTCGCCCGCATTGCCGGCGCGCTGACGGC
CGTCTCGGAAAATCCGCAGCAATCCTATCGGATTACCATTCTCAATTCGCCCGCCATCAATGCTTTCGCCTTGCCCGGTG
GATATCTTTACGTGACGCGCGGGCTTCTGGCGCTCGCCAATGACGCCTCGGAAGTGGCGGCCGTGCTGTCGCACGAAATG
GGCCATGTGACCGCAAACCACGGCATCGAACGCCAGCGCCGCGAAGAGGCGGAGGTGATTGCCAGCCGCGTGGTTGCAGA
AGTTCTGTCGAGCGACCTTGCCGGCAAACAGGCACTGGCCCGCGGCAAGCTGCGGCTTGCGGCCTTCTCCCGTCAGCAGG
AATTGCAGGCGGACGTCATCGGCGTCCGCATGCTGGGCGAGGCCGGTTATGACCCTTATGCATCGCCGCGTTTTCTGGAT
TCCATGGCGGCCTATGCCCGGTTCTCTTCGGCCGATCCCGAAAACGACCAGAGCCTCGACTTCCTTTCCAGCCACCCCAA
CACGCCGCAGCGCATCGAGCTGGCGCGCCGTCATGCCCGCGCCTTCGGACAGGAAGGGCAGGTCGGGGACCGGGGCCGCG
ACTGGTTTCTGGATGGCATAGACGGCCTGCTTTACGGGGACAGCCCACAAGAGGGTTATGTCCGCGGCCAGACATTCCTG
CATGGAACGCTGGGTATCCGTTTCGACGTGCCGGAAGGGTTCGTCATCGACAACAAGGTAGAGGCCGTTCTGGCGACTGG
CCCGGGCGACATGGCCATCCGTTTCGATGGCGTGGCCGATCCGAAACAGACGAGCCTTGCCAATTACCTGACCAGCGGCT
GGGTTGCCGGCCTGTTGCCGGAAACCGTCAAGGAAACGCAGATCAACGGTCTGGAGGCTGCGACAGCCCGCGCCAGCGCC
GATAAATGGGATTTCGACGTGACCGTCATTCGTGTCGGTCAGCAGATTTTCCGGTTTTTGACGGCGGTTCCGAAGGGCAA
TACGCAGCTCGATTCCATAGCCAATGTGCTGCGCACCAGCTTCCGCAAGATGACGCCGCAGGAGATTGCCTCGCTGAAGC
CGCTTAGAGTACGCGTGGTGACTGTGAAGCCCGGTGAAACTGTGGCGACAATGGCGGCGCGGATGATGGGAACGGAGCGG
AAGCTCGACATGTTCCGCATGATTAACGCAATGAGCGCCACGGCCACGCTTCAGCCCGGCCAGCGGGTCAAGATCATTTC
GGAATAG

Upstream 100 bases:

>100_bases
CGTTTTTACCGTTTTGGCATTCATCGCCCGTTGGGGCGAATCTGTTATTCTGGTCTGCAATTAACGGATGATCAGGAACG
TTAAGGGGCAGGCATAGAGA

Downstream 100 bases:

>100_bases
AGCCAAAGAAAAACCCCGGATCGCTCCGGGGTTTTTTGTTGTCTGGCATCTGTTAGAATTATTGCCACTCGCGCACGTCG
ACGAAATGACCGGCAATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
MKNSMTAQRRLFSGSGLRRSGRLAAAWSTLTASAVLLSSCQSLFSPAYQSTLRPSDNPQTVEQVQKNDPRAQMGAREHPR
IVASYGGEYRDAKTERLVARIAGALTAVSENPQQSYRITILNSPAINAFALPGGYLYVTRGLLALANDASEVAAVLSHEM
GHVTANHGIERQRREEAEVIASRVVAEVLSSDLAGKQALARGKLRLAAFSRQQELQADVIGVRMLGEAGYDPYASPRFLD
SMAAYARFSSADPENDQSLDFLSSHPNTPQRIELARRHARAFGQEGQVGDRGRDWFLDGIDGLLYGDSPQEGYVRGQTFL
HGTLGIRFDVPEGFVIDNKVEAVLATGPGDMAIRFDGVADPKQTSLANYLTSGWVAGLLPETVKETQINGLEAATARASA
DKWDFDVTVIRVGQQIFRFLTAVPKGNTQLDSIANVLRTSFRKMTPQEIASLKPLRVRVVTVKPGETVATMAARMMGTER
KLDMFRMINAMSATATLQPGQRVKIISE

Sequences:

>Translated_508_residues
MKNSMTAQRRLFSGSGLRRSGRLAAAWSTLTASAVLLSSCQSLFSPAYQSTLRPSDNPQTVEQVQKNDPRAQMGAREHPR
IVASYGGEYRDAKTERLVARIAGALTAVSENPQQSYRITILNSPAINAFALPGGYLYVTRGLLALANDASEVAAVLSHEM
GHVTANHGIERQRREEAEVIASRVVAEVLSSDLAGKQALARGKLRLAAFSRQQELQADVIGVRMLGEAGYDPYASPRFLD
SMAAYARFSSADPENDQSLDFLSSHPNTPQRIELARRHARAFGQEGQVGDRGRDWFLDGIDGLLYGDSPQEGYVRGQTFL
HGTLGIRFDVPEGFVIDNKVEAVLATGPGDMAIRFDGVADPKQTSLANYLTSGWVAGLLPETVKETQINGLEAATARASA
DKWDFDVTVIRVGQQIFRFLTAVPKGNTQLDSIANVLRTSFRKMTPQEIASLKPLRVRVVTVKPGETVATMAARMMGTER
KLDMFRMINAMSATATLQPGQRVKIISE
>Mature_508_residues
MKNSMTAQRRLFSGSGLRRSGRLAAAWSTLTASAVLLSSCQSLFSPAYQSTLRPSDNPQTVEQVQKNDPRAQMGAREHPR
IVASYGGEYRDAKTERLVARIAGALTAVSENPQQSYRITILNSPAINAFALPGGYLYVTRGLLALANDASEVAAVLSHEM
GHVTANHGIERQRREEAEVIASRVVAEVLSSDLAGKQALARGKLRLAAFSRQQELQADVIGVRMLGEAGYDPYASPRFLD
SMAAYARFSSADPENDQSLDFLSSHPNTPQRIELARRHARAFGQEGQVGDRGRDWFLDGIDGLLYGDSPQEGYVRGQTFL
HGTLGIRFDVPEGFVIDNKVEAVLATGPGDMAIRFDGVADPKQTSLANYLTSGWVAGLLPETVKETQINGLEAATARASA
DKWDFDVTVIRVGQQIFRFLTAVPKGNTQLDSIANVLRTSFRKMTPQEIASLKPLRVRVVTVKPGETVATMAARMMGTER
KLDMFRMINAMSATATLQPGQRVKIISE

Specific function: Unknown

COG id: COG4784

COG function: function code R; Putative Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=173, Percent_Identity=32.9479768786127, Blast_Score=83, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6322940, Length=160, Percent_Identity=30.625, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 55372; Mature: 55372

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSMTAQRRLFSGSGLRRSGRLAAAWSTLTASAVLLSSCQSLFSPAYQSTLRPSDNPQT
CCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VEQVQKNDPRAQMGAREHPRIVASYGGEYRDAKTERLVARIAGALTAVSENPQQSYRITI
HHHHHCCCCHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
LNSPAINAFALPGGYLYVTRGLLALANDASEVAAVLSHEMGHVTANHGIERQRREEAEVI
EECCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEHHCCHHHHHHHHHHHH
ASRVVAEVLSSDLAGKQALARGKLRLAAFSRQQELQADVIGVRMLGEAGYDPYASPRFLD
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHH
SMAAYARFSSADPENDQSLDFLSSHPNTPQRIELARRHARAFGQEGQVGDRGRDWFLDGI
HHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC
DGLLYGDSPQEGYVRGQTFLHGTLGIRFDVPEGFVIDNKVEAVLATGPGDMAIRFDGVAD
CCEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCEECCCEEEEEEECCCCEEEEECCCCC
PKQTSLANYLTSGWVAGLLPETVKETQINGLEAATARASADKWDFDVTVIRVGQQIFRFL
CHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
TAVPKGNTQLDSIANVLRTSFRKMTPQEIASLKPLRVRVVTVKPGETVATMAARMMGTER
HHCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCHH
KLDMFRMINAMSATATLQPGQRVKIISE
HHHHHHHHHHHHHCEEECCCCEEEEECC
>Mature Secondary Structure
MKNSMTAQRRLFSGSGLRRSGRLAAAWSTLTASAVLLSSCQSLFSPAYQSTLRPSDNPQT
CCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VEQVQKNDPRAQMGAREHPRIVASYGGEYRDAKTERLVARIAGALTAVSENPQQSYRITI
HHHHHCCCCHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
LNSPAINAFALPGGYLYVTRGLLALANDASEVAAVLSHEMGHVTANHGIERQRREEAEVI
EECCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEHHCCHHHHHHHHHHHH
ASRVVAEVLSSDLAGKQALARGKLRLAAFSRQQELQADVIGVRMLGEAGYDPYASPRFLD
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHH
SMAAYARFSSADPENDQSLDFLSSHPNTPQRIELARRHARAFGQEGQVGDRGRDWFLDGI
HHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCC
DGLLYGDSPQEGYVRGQTFLHGTLGIRFDVPEGFVIDNKVEAVLATGPGDMAIRFDGVAD
CCEEECCCCCCCCCCCCEEEEEEEEEEEECCCCCEECCCEEEEEEECCCCEEEEECCCCC
PKQTSLANYLTSGWVAGLLPETVKETQINGLEAATARASADKWDFDVTVIRVGQQIFRFL
CHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
TAVPKGNTQLDSIANVLRTSFRKMTPQEIASLKPLRVRVVTVKPGETVATMAARMMGTER
HHCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCHH
KLDMFRMINAMSATATLQPGQRVKIISE
HHHHHHHHHHHHHCEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]