Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 159185278

Identifier: 159185278

GI number: 159185278

Start: 2560092

End: 2560931

Strand: Reverse

Name: 159185278

Synonym: Atu2585

Alternate gene names: NA

Gene position: 2560931-2560092 (Counterclockwise)

Preceding gene: 159185284

Following gene: 159185276

Centisome position: 90.12

GC content: 61.67

Gene sequence:

>840_bases
ATGGGCGAGCGAACTGTGCTGGGCCTGCCGCGCCGACTGCATGCCGCGCGGCTGCGCCTCGCCAAGGCCGAAGGCGATCT
GGTTGCCAGGATCGGTTATCAATATACGCTGGTTCCGCCGCCGGATATGCTGGCAAAATATACGCAGTTTTCCGCCGAAG
ACCGGCGCATGATTAATCGCAAAAGCCGGGAGGATGTGCCGCGGCTCATTCACCAGATATGGATCGGGGAAAAAGCGCCG
CCGATATCGGTCAAAGCCTGGGCCGCCCATGCCGCGCGGCATGGTTACGACTATCGACTCTGGCGGGAGGCAGATCTTGA
GCGGGAGGGTGTGTTTTCGAATGCCATCTTTAACAGGATGCTCAGTGAGGGCGATTATCCCGGCGCGGTGGACGTGGCGC
GTTACATCCTGCTGGAGCGTTTTGGCGGTATCTATCTCGACTGCGACTGGTATCCGGCGCGCGACGATAGGAGTTTCGAT
GCTTTCGTGCCTCTGGCAGGGCTGACGGCGTTTGACGAAAAAACGCCGCGCGATACGGGGCAGGGGAGCATGCTGCTTGC
CAATTCCTTCATTGCTGCCCCAGCCGGACATCCGGTCTTTCGCAAGATGCTCGATTCCTTTCCAGGGATCATCGAGGAAA
TGCCGCGTGCGCCGGCCTGGTGGTCGACCGGTCCGCTGATCTTCACCGTCATCGCCCGGGCGGGCAGTATCAGCCTTGCG
CCGGCGTCGTTTGTCGCCGTGACCCTTGCCGACCGCGCACCGCTGGAGGAGGTGGAGGCGATCAGGCGGGAACTTGCCAC
GCAGGACAGCGGGATGCTGATCGCCTGGAAGTCATGGTGA

Upstream 100 bases:

>100_bases
CGCTCAGTTCGATAAGGCCCGGCAGTTGCAAAATGAAGGGCAATATGCGGAAGCAGACGCGCTTCTCTTATCGTTGGTTG
CAGCAAAGGACGCGCATCTG

Downstream 100 bases:

>100_bases
TATCTCGTTGACGAGATCGTTCGAGGAACGCCAGCGGGCGGCGGGATGCCCTGTCGTCACCTCGAAAAGCTGCCGCAGGA
AGCGCCAGACAGTATCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MGERTVLGLPRRLHAARLRLAKAEGDLVARIGYQYTLVPPPDMLAKYTQFSAEDRRMINRKSREDVPRLIHQIWIGEKAP
PISVKAWAAHAARHGYDYRLWREADLEREGVFSNAIFNRMLSEGDYPGAVDVARYILLERFGGIYLDCDWYPARDDRSFD
AFVPLAGLTAFDEKTPRDTGQGSMLLANSFIAAPAGHPVFRKMLDSFPGIIEEMPRAPAWWSTGPLIFTVIARAGSISLA
PASFVAVTLADRAPLEEVEAIRRELATQDSGMLIAWKSW

Sequences:

>Translated_279_residues
MGERTVLGLPRRLHAARLRLAKAEGDLVARIGYQYTLVPPPDMLAKYTQFSAEDRRMINRKSREDVPRLIHQIWIGEKAP
PISVKAWAAHAARHGYDYRLWREADLEREGVFSNAIFNRMLSEGDYPGAVDVARYILLERFGGIYLDCDWYPARDDRSFD
AFVPLAGLTAFDEKTPRDTGQGSMLLANSFIAAPAGHPVFRKMLDSFPGIIEEMPRAPAWWSTGPLIFTVIARAGSISLA
PASFVAVTLADRAPLEEVEAIRRELATQDSGMLIAWKSW
>Mature_278_residues
GERTVLGLPRRLHAARLRLAKAEGDLVARIGYQYTLVPPPDMLAKYTQFSAEDRRMINRKSREDVPRLIHQIWIGEKAPP
ISVKAWAAHAARHGYDYRLWREADLEREGVFSNAIFNRMLSEGDYPGAVDVARYILLERFGGIYLDCDWYPARDDRSFDA
FVPLAGLTAFDEKTPRDTGQGSMLLANSFIAAPAGHPVFRKMLDSFPGIIEEMPRAPAWWSTGPLIFTVIARAGSISLAP
ASFVAVTLADRAPLEEVEAIRRELATQDSGMLIAWKSW

Specific function: Unknown

COG id: COG3774

COG function: function code M; Mannosyltransferase OCH1 and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31317; Mature: 31186

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGERTVLGLPRRLHAARLRLAKAEGDLVARIGYQYTLVPPPDMLAKYTQFSAEDRRMINR
CCCCCEECCHHHHHHHHHHHHHCCCCEEEECCCEEEECCCHHHHHHHHHCCHHHHHHHHH
KSREDVPRLIHQIWIGEKAPPISVKAWAAHAARHGYDYRLWREADLEREGVFSNAIFNRM
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
LSEGDYPGAVDVARYILLERFGGIYLDCDWYPARDDRSFDAFVPLAGLTAFDEKTPRDTG
HHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCC
QGSMLLANSFIAAPAGHPVFRKMLDSFPGIIEEMPRAPAWWSTGPLIFTVIARAGSISLA
CCCEEEECCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEC
PASFVAVTLADRAPLEEVEAIRRELATQDSGMLIAWKSW
CHHEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure 
GERTVLGLPRRLHAARLRLAKAEGDLVARIGYQYTLVPPPDMLAKYTQFSAEDRRMINR
CCCCEECCHHHHHHHHHHHHHCCCCEEEECCCEEEECCCHHHHHHHHHCCHHHHHHHHH
KSREDVPRLIHQIWIGEKAPPISVKAWAAHAARHGYDYRLWREADLEREGVFSNAIFNRM
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
LSEGDYPGAVDVARYILLERFGGIYLDCDWYPARDDRSFDAFVPLAGLTAFDEKTPRDTG
HHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCC
QGSMLLANSFIAAPAGHPVFRKMLDSFPGIIEEMPRAPAWWSTGPLIFTVIARAGSISLA
CCCEEEECCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEC
PASFVAVTLADRAPLEEVEAIRRELATQDSGMLIAWKSW
CHHEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA