Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185278
Identifier: 159185278
GI number: 159185278
Start: 2560092
End: 2560931
Strand: Reverse
Name: 159185278
Synonym: Atu2585
Alternate gene names: NA
Gene position: 2560931-2560092 (Counterclockwise)
Preceding gene: 159185284
Following gene: 159185276
Centisome position: 90.12
GC content: 61.67
Gene sequence:
>840_bases ATGGGCGAGCGAACTGTGCTGGGCCTGCCGCGCCGACTGCATGCCGCGCGGCTGCGCCTCGCCAAGGCCGAAGGCGATCT GGTTGCCAGGATCGGTTATCAATATACGCTGGTTCCGCCGCCGGATATGCTGGCAAAATATACGCAGTTTTCCGCCGAAG ACCGGCGCATGATTAATCGCAAAAGCCGGGAGGATGTGCCGCGGCTCATTCACCAGATATGGATCGGGGAAAAAGCGCCG CCGATATCGGTCAAAGCCTGGGCCGCCCATGCCGCGCGGCATGGTTACGACTATCGACTCTGGCGGGAGGCAGATCTTGA GCGGGAGGGTGTGTTTTCGAATGCCATCTTTAACAGGATGCTCAGTGAGGGCGATTATCCCGGCGCGGTGGACGTGGCGC GTTACATCCTGCTGGAGCGTTTTGGCGGTATCTATCTCGACTGCGACTGGTATCCGGCGCGCGACGATAGGAGTTTCGAT GCTTTCGTGCCTCTGGCAGGGCTGACGGCGTTTGACGAAAAAACGCCGCGCGATACGGGGCAGGGGAGCATGCTGCTTGC CAATTCCTTCATTGCTGCCCCAGCCGGACATCCGGTCTTTCGCAAGATGCTCGATTCCTTTCCAGGGATCATCGAGGAAA TGCCGCGTGCGCCGGCCTGGTGGTCGACCGGTCCGCTGATCTTCACCGTCATCGCCCGGGCGGGCAGTATCAGCCTTGCG CCGGCGTCGTTTGTCGCCGTGACCCTTGCCGACCGCGCACCGCTGGAGGAGGTGGAGGCGATCAGGCGGGAACTTGCCAC GCAGGACAGCGGGATGCTGATCGCCTGGAAGTCATGGTGA
Upstream 100 bases:
>100_bases CGCTCAGTTCGATAAGGCCCGGCAGTTGCAAAATGAAGGGCAATATGCGGAAGCAGACGCGCTTCTCTTATCGTTGGTTG CAGCAAAGGACGCGCATCTG
Downstream 100 bases:
>100_bases TATCTCGTTGACGAGATCGTTCGAGGAACGCCAGCGGGCGGCGGGATGCCCTGTCGTCACCTCGAAAAGCTGCCGCAGGA AGCGCCAGACAGTATCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MGERTVLGLPRRLHAARLRLAKAEGDLVARIGYQYTLVPPPDMLAKYTQFSAEDRRMINRKSREDVPRLIHQIWIGEKAP PISVKAWAAHAARHGYDYRLWREADLEREGVFSNAIFNRMLSEGDYPGAVDVARYILLERFGGIYLDCDWYPARDDRSFD AFVPLAGLTAFDEKTPRDTGQGSMLLANSFIAAPAGHPVFRKMLDSFPGIIEEMPRAPAWWSTGPLIFTVIARAGSISLA PASFVAVTLADRAPLEEVEAIRRELATQDSGMLIAWKSW
Sequences:
>Translated_279_residues MGERTVLGLPRRLHAARLRLAKAEGDLVARIGYQYTLVPPPDMLAKYTQFSAEDRRMINRKSREDVPRLIHQIWIGEKAP PISVKAWAAHAARHGYDYRLWREADLEREGVFSNAIFNRMLSEGDYPGAVDVARYILLERFGGIYLDCDWYPARDDRSFD AFVPLAGLTAFDEKTPRDTGQGSMLLANSFIAAPAGHPVFRKMLDSFPGIIEEMPRAPAWWSTGPLIFTVIARAGSISLA PASFVAVTLADRAPLEEVEAIRRELATQDSGMLIAWKSW >Mature_278_residues GERTVLGLPRRLHAARLRLAKAEGDLVARIGYQYTLVPPPDMLAKYTQFSAEDRRMINRKSREDVPRLIHQIWIGEKAPP ISVKAWAAHAARHGYDYRLWREADLEREGVFSNAIFNRMLSEGDYPGAVDVARYILLERFGGIYLDCDWYPARDDRSFDA FVPLAGLTAFDEKTPRDTGQGSMLLANSFIAAPAGHPVFRKMLDSFPGIIEEMPRAPAWWSTGPLIFTVIARAGSISLAP ASFVAVTLADRAPLEEVEAIRRELATQDSGMLIAWKSW
Specific function: Unknown
COG id: COG3774
COG function: function code M; Mannosyltransferase OCH1 and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31317; Mature: 31186
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGERTVLGLPRRLHAARLRLAKAEGDLVARIGYQYTLVPPPDMLAKYTQFSAEDRRMINR CCCCCEECCHHHHHHHHHHHHHCCCCEEEECCCEEEECCCHHHHHHHHHCCHHHHHHHHH KSREDVPRLIHQIWIGEKAPPISVKAWAAHAARHGYDYRLWREADLEREGVFSNAIFNRM CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH LSEGDYPGAVDVARYILLERFGGIYLDCDWYPARDDRSFDAFVPLAGLTAFDEKTPRDTG HHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCC QGSMLLANSFIAAPAGHPVFRKMLDSFPGIIEEMPRAPAWWSTGPLIFTVIARAGSISLA CCCEEEECCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEC PASFVAVTLADRAPLEEVEAIRRELATQDSGMLIAWKSW CHHEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure GERTVLGLPRRLHAARLRLAKAEGDLVARIGYQYTLVPPPDMLAKYTQFSAEDRRMINR CCCCEECCHHHHHHHHHHHHHCCCCEEEECCCEEEECCCHHHHHHHHHCCHHHHHHHHH KSREDVPRLIHQIWIGEKAPPISVKAWAAHAARHGYDYRLWREADLEREGVFSNAIFNRM CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH LSEGDYPGAVDVARYILLERFGGIYLDCDWYPARDDRSFDAFVPLAGLTAFDEKTPRDTG HHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCC QGSMLLANSFIAAPAGHPVFRKMLDSFPGIIEEMPRAPAWWSTGPLIFTVIARAGSISLA CCCEEEECCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEC PASFVAVTLADRAPLEEVEAIRRELATQDSGMLIAWKSW CHHEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA