Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185229
Identifier: 159185229
GI number: 159185229
Start: 2440930
End: 2441274
Strand: Reverse
Name: 159185229
Synonym: Atu2472
Alternate gene names: NA
Gene position: 2441274-2440930 (Counterclockwise)
Preceding gene: 15889748
Following gene: 159185227
Centisome position: 85.91
GC content: 60.87
Gene sequence:
>345_bases ATGGACTGCGTCCCCTCAATCCTGCGGCCAGTCGCCAACGATTTCCCGTCTCTCGAGCTTGAGGGACCGGTCCGGCTGCA CCCGATAAGTTTCAATCGCCAGCCGCCCGTCACCCATCACGAATTCGTTGCTAAGCGTGCTGCCGATTGGGGATTTGGTC AGTTTGGTTCGCGGCTGTCCACCATAGGTGATGCTGCCGGGAATGGGTTCCACATCGGGTGCCGCGGTGGCGCAGCCGGC GAGCGCCAGAACCATCATGATTGCGATCGTGCGCATGTTTTTCTCCTGCGTTTGGGGCGGAATCATATCACGGTCGCGCC CGCGCTTCACATCCCGTTGGCGTGA
Upstream 100 bases:
>100_bases CAAGGTCGGCGGAAATCAAAATTATGTTTTAGAACGGTTCTGAATTGCCGTGAGCGGGAAAGGGGTGGTCGGCCGGGGTA GTAAGGCTGGGTGTGAGCGC
Downstream 100 bases:
>100_bases ACAAAAAAAGGCCCCGTATCCGGAGATACGGGGCCAGTTGCCTTGGGAGGTTTCCGGTTTCTCAGTCCTCGTTGGCGGCA AGCTGCGACAGCACCTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MDCVPSILRPVANDFPSLELEGPVRLHPISFNRQPPVTHHEFVAKRAADWGFGQFGSRLSTIGDAAGNGFHIGCRGGAAG ERQNHHDCDRAHVFLLRLGRNHITVAPALHIPLA
Sequences:
>Translated_114_residues MDCVPSILRPVANDFPSLELEGPVRLHPISFNRQPPVTHHEFVAKRAADWGFGQFGSRLSTIGDAAGNGFHIGCRGGAAG ERQNHHDCDRAHVFLLRLGRNHITVAPALHIPLA >Mature_114_residues MDCVPSILRPVANDFPSLELEGPVRLHPISFNRQPPVTHHEFVAKRAADWGFGQFGSRLSTIGDAAGNGFHIGCRGGAAG ERQNHHDCDRAHVFLLRLGRNHITVAPALHIPLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12416; Mature: 12416
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCVPSILRPVANDFPSLELEGPVRLHPISFNRQPPVTHHEFVAKRAADWGFGQFGSRLS CCCHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH TIGDAAGNGFHIGCRGGAAGERQNHHDCDRAHVFLLRLGRNHITVAPALHIPLA HHHCCCCCCEEEEECCCCCCCCCCCCCCHHHEEEEEEECCCCEEECCEEECCCC >Mature Secondary Structure MDCVPSILRPVANDFPSLELEGPVRLHPISFNRQPPVTHHEFVAKRAADWGFGQFGSRLS CCCHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHH TIGDAAGNGFHIGCRGGAAGERQNHHDCDRAHVFLLRLGRNHITVAPALHIPLA HHHCCCCCCEEEEECCCCCCCCCCCCCCHHHEEEEEEECCCCEEECCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA