Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is livK [C]
Identifier: 159185209
GI number: 159185209
Start: 2394505
End: 2395623
Strand: Reverse
Name: livK [C]
Synonym: Atu2422
Alternate gene names: 159185209
Gene position: 2395623-2394505 (Counterclockwise)
Preceding gene: 159185442
Following gene: 15889691
Centisome position: 84.31
GC content: 59.7
Gene sequence:
>1119_bases ATGAAGAAGTCTCTTCTTTCCGCTGTTGCGCTGACCGCCATGGTCGCGTTTGGCGGTTCGGCCTGGGCCGATGTCGTGAT CGCTGTCGGCGCACCGCTGACCGGCCCGAACGCTGCTTTCGGCGCTCAGATCCAGAAGGGTGCCGAACAGGCTGCGAAAG ACATCAATGCTGCCGGCGGTATCAATGGCGAGCAGATTAAGATCGTGCTGGGCGACGACGTATCCGACCCCAAGCAGGGT ATTTCGGTTGCCAACAAATTCGTTGCTGACGGCGTGAAATTCGTTGTCGGTCACTTCAACTCGGGTGTTTCCATTCCGGC ATCGGAAGTTTATGCCGAAAACGGCATTCTCGAAATCACGCCCGCTGCGACCAACCCGGTCTTTACCGAGCGTGGCCTGT GGAACACCTTCCGCACCTGCGGCCGTGACGACCAGCAGGGCGGCATTGCCGGCAAGTACCTGGCCGATCATTTCAAGGAC GCCAAGGTCGCCATCATTCACGACAAGACGCCTTATGGTCAGGGTCTTGCCGATGAAACCAAAAAGGCTGCCAATGCTGC CGGCGTGACTGAGGTCATGTATGAAGGCGTCAACGTCGGCGACAAGGACTTCTCCGCGCTGATCTCGAAGATGAAGGAAG CCGGCGTTTCCATCATCTACTGGGGCGGCCTGCACACCGAAGCCGGCCTGATCATCCGCCAGGCGGCTGACCAGGGTCTG AAGGCCAAGCTCGTTTCGGGCGACGGTATTGTCTCGAACGAACTTGCTTCCATCGCCGGCGACGCCGTCGAGGGCACGCT GAACACCTTCGGCCCTGATCCGACGCTGCGCCCGGAAAACAAGGAACTGGTAGAGAAGTTCAAGGCCGCCGGCTTCAACC CGGAAGCCTACACGCTCTACTCCTATGCCGCGATGCAGGCGATTGCAGGCGCAGCGAAGGCTGCGGGTTCCGTGGAGCCG GAAAAGGTTGCCGAAGCCCTGAAGAAGGGCTCCTTCCCGACCGCACTCGGCGAAATCTCCTTCGATGAGAAGGGCGACCC GAAGCTTCCCGGCTACGTCATGTACGAATGGAAGAAGGGTCCGGACGGCAAGTTCACCTACATCCAGCAGGGCAGCTAA
Upstream 100 bases:
>100_bases TGCACAATGCTCGTCAGAGTGGAACGGTTTCTGTTCGGTTAAGGTGGGTATCGAACAGGTCCTTGCAATCAACCCATCCA AGGAACTGGGAGTTAAAGTA
Downstream 100 bases:
>100_bases GCCTTCAGCGATACACTATCGAAGCCCGGCAGCGATGCCGGGCTTTTTGTTTTTGACGACACTCTGCTGCTTTGCCTGCC ACACTGGAGACAACAAGGCG
Product: ABC transporter, substrate binding protein (amino acid)
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MKKSLLSAVALTAMVAFGGSAWADVVIAVGAPLTGPNAAFGAQIQKGAEQAAKDINAAGGINGEQIKIVLGDDVSDPKQG ISVANKFVADGVKFVVGHFNSGVSIPASEVYAENGILEITPAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLADHFKD AKVAIIHDKTPYGQGLADETKKAANAAGVTEVMYEGVNVGDKDFSALISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGL KAKLVSGDGIVSNELASIAGDAVEGTLNTFGPDPTLRPENKELVEKFKAAGFNPEAYTLYSYAAMQAIAGAAKAAGSVEP EKVAEALKKGSFPTALGEISFDEKGDPKLPGYVMYEWKKGPDGKFTYIQQGS
Sequences:
>Translated_372_residues MKKSLLSAVALTAMVAFGGSAWADVVIAVGAPLTGPNAAFGAQIQKGAEQAAKDINAAGGINGEQIKIVLGDDVSDPKQG ISVANKFVADGVKFVVGHFNSGVSIPASEVYAENGILEITPAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLADHFKD AKVAIIHDKTPYGQGLADETKKAANAAGVTEVMYEGVNVGDKDFSALISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGL KAKLVSGDGIVSNELASIAGDAVEGTLNTFGPDPTLRPENKELVEKFKAAGFNPEAYTLYSYAAMQAIAGAAKAAGSVEP EKVAEALKKGSFPTALGEISFDEKGDPKLPGYVMYEWKKGPDGKFTYIQQGS >Mature_372_residues MKKSLLSAVALTAMVAFGGSAWADVVIAVGAPLTGPNAAFGAQIQKGAEQAAKDINAAGGINGEQIKIVLGDDVSDPKQG ISVANKFVADGVKFVVGHFNSGVSIPASEVYAENGILEITPAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLADHFKD AKVAIIHDKTPYGQGLADETKKAANAAGVTEVMYEGVNVGDKDFSALISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGL KAKLVSGDGIVSNELASIAGDAVEGTLNTFGPDPTLRPENKELVEKFKAAGFNPEAYTLYSYAAMQAIAGAAKAAGSVEP EKVAEALKKGSFPTALGEISFDEKGDPKLPGYVMYEWKKGPDGKFTYIQQGS
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=359, Percent_Identity=40.3899721448468, Blast_Score=265, Evalue=5e-72, Organism=Escherichia coli, GI48994941, Length=345, Percent_Identity=40.5797101449275, Blast_Score=259, Evalue=2e-70,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 38809; Mature: 38809
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLLSAVALTAMVAFGGSAWADVVIAVGAPLTGPNAAFGAQIQKGAEQAAKDINAAGG CCHHHHHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC INGEQIKIVLGDDVSDPKQGISVANKFVADGVKFVVGHFNSGVSIPASEVYAENGILEIT CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHCCCCEEEE PAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLADHFKDAKVAIIHDKTPYGQGLADET CCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHHH KKAANAAGVTEVMYEGVNVGDKDFSALISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGL HHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCC KAKLVSGDGIVSNELASIAGDAVEGTLNTFGPDPTLRPENKELVEKFKAAGFNPEAYTLY EEEEECCCCCHHHHHHHHHCHHHHCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHH SYAAMQAIAGAAKAAGSVEPEKVAEALKKGSFPTALGEISFDEKGDPKLPGYVMYEWKKG HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC PDGKFTYIQQGS CCCCEEEEECCC >Mature Secondary Structure MKKSLLSAVALTAMVAFGGSAWADVVIAVGAPLTGPNAAFGAQIQKGAEQAAKDINAAGG CCHHHHHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC INGEQIKIVLGDDVSDPKQGISVANKFVADGVKFVVGHFNSGVSIPASEVYAENGILEIT CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHCCCCEEEE PAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLADHFKDAKVAIIHDKTPYGQGLADET CCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCHHHH KKAANAAGVTEVMYEGVNVGDKDFSALISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGL HHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCC KAKLVSGDGIVSNELASIAGDAVEGTLNTFGPDPTLRPENKELVEKFKAAGFNPEAYTLY EEEEECCCCCHHHHHHHHHCHHHHCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHH SYAAMQAIAGAAKAAGSVEPEKVAEALKKGSFPTALGEISFDEKGDPKLPGYVMYEWKKG HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC PDGKFTYIQQGS CCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA