Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is exoP [H]
Identifier: 159185182
GI number: 159185182
Start: 2349321
End: 2350715
Strand: Reverse
Name: exoP [H]
Synonym: Atu2377
Alternate gene names: 159185182
Gene position: 2350715-2349321 (Counterclockwise)
Preceding gene: 15889653
Following gene: 159185181
Centisome position: 82.73
GC content: 62.01
Gene sequence:
>1395_bases ATGCTGCCCGGCCTCAAATATATCGACAGGATCGGCGTGGACGACGTGCTCGTCTGGCTGCGCAAGGGTATTGTCTGGAT CGTGCTGGCGATCGTTCTCTGCGTTGGCGGCGCGCTCACTTATGCCTCCATGACGCCGCCGCGCTACAAGGCCTATACGG ATATCGTCGTTAATCCCTCCAATCTGAACGTCGTCAATGACGGGGTGTTTTCGCCCAACCAGCAACGCGACACGCAGATT CTCGAGGTGGAAAGCAAGCTGCGCACCATCACCTCGCGCAATGTGCTGGCGCGGGTGGTGGATGAGCTGAAGCTCGATCA GGACCCCGAATTCGTCAGCCCACCGCCGCTCGCCCGGCTGAAGGCCATGTTTTCATCAAAGCCTGATGATGGCGACAACC GCGTCGGCGCGCTTCGCTCGCTCGGCGACCGGGTGACGGCGGAACGTGATCCGCGCTCCTTCGTGGTCACGCTTTCGGTC TGGACCAATGATGCCGAAAAATCGGTGGCGGTCTCGAAGGCCATCGTGAAGGCCTTCGAAAGCGAGCTGTTCCAGACAAA CTCCGACAGCAGCCAGCGCGTCGTCGACGATCTCAAGAAGCGGCTCGAGGAAATGCGCGAGAATGTGACCATCGCCGAAA AGCGCGTGGCCGATTTCCGCCGCGAGAACGGTTTGCAGGAAAATAATGGCCAGCTCGTCAGCAATCTCGCCTCCGGCGAA TTGAATGCGCAGGTGCTTGCGACCCAGCAGCGGCTTATCCAGGAGGAATCCCGCCTGAAGCAGATGGAGGCGGCGATCGC CCAGAACCGCACGCAGAGCGACGCCATCTTCGACAGCCAGACGATGAACACCATCCGCGCCCAATATAGCACGCTGCAAC AGCAGATCGGCGCGATGACGCTGACCTATGGCGCGCGCCATCCGCGTCTCGCAACTGCCGGCGCGGAGCGGGCGATGCTG GAACGTGGTATGGCGGACGAGGCGCGGCGCATTCTCCAAGCAGCCAAGATCAATGTCGCCGAAGCGCGTTCCTCGCTTGA TGCGCTCAGATTGAAGGCTGTGGCGGAGCGCGCCAATGTCTTCACGGACAATGATGCGCAGGTGCGGCTGCGCGATCTCG ATCGCGACGCCCGCTCGGCGGCGGCGATCTATGAGACTTACCTCACCCGCTCGCGCCAGCTTGCCGAACAGCAGTCGATC GATTCCACCAATGTGCGGGTGATTTCGCAGCCGGTCGCACCCAATTCCAGAAGCTGGCCGCCGGGCAAGCTGACCTTCCT GATTGCCGGCGGCATGGGTGGTCTGTTCCTCGGTCTGGCGATCGCCGTGGCGCTGGGTCTCTGGGGGTATTTGCGGCGGG ACGATCATGCGGAAGCAGCGGCGCGTTATGCCTGA
Upstream 100 bases:
>100_bases GAAAGAGCATCTCGAGCCGAAACCGGCGCCGGCCGCTGCCGAGCCGGCCCCGGTCGAGACGCGGGTGAGGGCGGCTTCAC CTGGTGGAGGCCTTGCCTCC
Downstream 100 bases:
>100_bases TCCGGGAGCGCCTGCTTTCCGCGCTTATTCTTCCGAGATAAGGCCGTCATAGACCTCGAGCAGGGCGGCGGCGATGGCTG CGCCCAGCGCATTGCCGGCA
Product: succinoglycan biosynthesis transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MLPGLKYIDRIGVDDVLVWLRKGIVWIVLAIVLCVGGALTYASMTPPRYKAYTDIVVNPSNLNVVNDGVFSPNQQRDTQI LEVESKLRTITSRNVLARVVDELKLDQDPEFVSPPPLARLKAMFSSKPDDGDNRVGALRSLGDRVTAERDPRSFVVTLSV WTNDAEKSVAVSKAIVKAFESELFQTNSDSSQRVVDDLKKRLEEMRENVTIAEKRVADFRRENGLQENNGQLVSNLASGE LNAQVLATQQRLIQEESRLKQMEAAIAQNRTQSDAIFDSQTMNTIRAQYSTLQQQIGAMTLTYGARHPRLATAGAERAML ERGMADEARRILQAAKINVAEARSSLDALRLKAVAERANVFTDNDAQVRLRDLDRDARSAAAIYETYLTRSRQLAEQQSI DSTNVRVISQPVAPNSRSWPPGKLTFLIAGGMGGLFLGLAIAVALGLWGYLRRDDHAEAAARYA
Sequences:
>Translated_464_residues MLPGLKYIDRIGVDDVLVWLRKGIVWIVLAIVLCVGGALTYASMTPPRYKAYTDIVVNPSNLNVVNDGVFSPNQQRDTQI LEVESKLRTITSRNVLARVVDELKLDQDPEFVSPPPLARLKAMFSSKPDDGDNRVGALRSLGDRVTAERDPRSFVVTLSV WTNDAEKSVAVSKAIVKAFESELFQTNSDSSQRVVDDLKKRLEEMRENVTIAEKRVADFRRENGLQENNGQLVSNLASGE LNAQVLATQQRLIQEESRLKQMEAAIAQNRTQSDAIFDSQTMNTIRAQYSTLQQQIGAMTLTYGARHPRLATAGAERAML ERGMADEARRILQAAKINVAEARSSLDALRLKAVAERANVFTDNDAQVRLRDLDRDARSAAAIYETYLTRSRQLAEQQSI DSTNVRVISQPVAPNSRSWPPGKLTFLIAGGMGGLFLGLAIAVALGLWGYLRRDDHAEAAARYA >Mature_464_residues MLPGLKYIDRIGVDDVLVWLRKGIVWIVLAIVLCVGGALTYASMTPPRYKAYTDIVVNPSNLNVVNDGVFSPNQQRDTQI LEVESKLRTITSRNVLARVVDELKLDQDPEFVSPPPLARLKAMFSSKPDDGDNRVGALRSLGDRVTAERDPRSFVVTLSV WTNDAEKSVAVSKAIVKAFESELFQTNSDSSQRVVDDLKKRLEEMRENVTIAEKRVADFRRENGLQENNGQLVSNLASGE LNAQVLATQQRLIQEESRLKQMEAAIAQNRTQSDAIFDSQTMNTIRAQYSTLQQQIGAMTLTYGARHPRLATAGAERAML ERGMADEARRILQAAKINVAEARSSLDALRLKAVAERANVFTDNDAQVRLRDLDRDARSAAAIYETYLTRSRQLAEQQSI DSTNVRVISQPVAPNSRSWPPGKLTFLIAGGMGGLFLGLAIAVALGLWGYLRRDDHAEAAARYA
Specific function: Unknown
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.solanacearum epsB [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR005700 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: NA
Molecular weight: Translated: 51384; Mature: 51384
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPGLKYIDRIGVDDVLVWLRKGIVWIVLAIVLCVGGALTYASMTPPRYKAYTDIVVNPS CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHEEEEEECCC NLNVVNDGVFSPNQQRDTQILEVESKLRTITSRNVLARVVDELKLDQDPEFVSPPPLARL CCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH KAMFSSKPDDGDNRVGALRSLGDRVTAERDPRSFVVTLSVWTNDAEKSVAVSKAIVKAFE HHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHH SELFQTNSDSSQRVVDDLKKRLEEMRENVTIAEKRVADFRRENGLQENNGQLVSNLASGE HHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC LNAQVLATQQRLIQEESRLKQMEAAIAQNRTQSDAIFDSQTMNTIRAQYSTLQQQIGAMT CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEE LTYGARHPRLATAGAERAMLERGMADEARRILQAAKINVAEARSSLDALRLKAVAERANV EEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FTDNDAQVRLRDLDRDARSAAAIYETYLTRSRQLAEQQSIDSTNVRVISQPVAPNSRSWP CCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCC PGKLTFLIAGGMGGLFLGLAIAVALGLWGYLRRDDHAEAAARYA CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure MLPGLKYIDRIGVDDVLVWLRKGIVWIVLAIVLCVGGALTYASMTPPRYKAYTDIVVNPS CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHEEEEEECCC NLNVVNDGVFSPNQQRDTQILEVESKLRTITSRNVLARVVDELKLDQDPEFVSPPPLARL CCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH KAMFSSKPDDGDNRVGALRSLGDRVTAERDPRSFVVTLSVWTNDAEKSVAVSKAIVKAFE HHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHH SELFQTNSDSSQRVVDDLKKRLEEMRENVTIAEKRVADFRRENGLQENNGQLVSNLASGE HHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCC LNAQVLATQQRLIQEESRLKQMEAAIAQNRTQSDAIFDSQTMNTIRAQYSTLQQQIGAMT CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEE LTYGARHPRLATAGAERAMLERGMADEARRILQAAKINVAEARSSLDALRLKAVAERANV EEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FTDNDAQVRLRDLDRDARSAAAIYETYLTRSRQLAEQQSIDSTNVRVISQPVAPNSRSWP CCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCC PGKLTFLIAGGMGGLFLGLAIAVALGLWGYLRRDDHAEAAARYA CCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8226645; 8226646; 8246891; 11481431 [H]