Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185154
Identifier: 159185154
GI number: 159185154
Start: 2290992
End: 2291336
Strand: Reverse
Name: 159185154
Synonym: Atu2313
Alternate gene names: NA
Gene position: 2291336-2290992 (Counterclockwise)
Preceding gene: 15889594
Following gene: 15889583
Centisome position: 80.64
GC content: 58.55
Gene sequence:
>345_bases ATGCCGATGCGCCTTGTTCTGACGGTCCTCTTTCTGCTTCTGGCGTTCAGCGCCACGGCGCCTGCCCATGAATCCCACAA GGGGTTCAAATATGAGAGCTATTGTTGCAATGGCGATGCCGAAACCGGCGACTGCCAGATGATCCCGACGCGTAGCGTTC GTGTCACGCCCGATGGCTACGAGGTCTCGCTTGCGCCCGGCGATCATCGGCTGGTGACGCGGCGCCATGTCTTCAGCTGG TCGCAGAGCGAGGCAAGGCGGTCCGAAGATGGTGAATATCATCTCTGTCTGTTTCCGGACGAGGATACGCCGCGCTGCTT TTATGCGCCTGATATGGGATATTGA
Upstream 100 bases:
>100_bases GTTCCCGGTACCGTTGTGTCCGGGTGCGGGTTATGTGTGAAATTTTGAATAAAGGGACGCAATGACCTTCCGGCAGCCGC CGTTGTTTTCAACGGAGACC
Downstream 100 bases:
>100_bases GGCTGCTGCTGCGGCCGGCTTTCCTCTATGCGCTTCAATATCCAGTCGCGAAACAGTTTTATCTTGCGAATGTTCCTGCG GTTTTCCGGATAGACCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MPMRLVLTVLFLLLAFSATAPAHESHKGFKYESYCCNGDAETGDCQMIPTRSVRVTPDGYEVSLAPGDHRLVTRRHVFSW SQSEARRSEDGEYHLCLFPDEDTPRCFYAPDMGY
Sequences:
>Translated_114_residues MPMRLVLTVLFLLLAFSATAPAHESHKGFKYESYCCNGDAETGDCQMIPTRSVRVTPDGYEVSLAPGDHRLVTRRHVFSW SQSEARRSEDGEYHLCLFPDEDTPRCFYAPDMGY >Mature_113_residues PMRLVLTVLFLLLAFSATAPAHESHKGFKYESYCCNGDAETGDCQMIPTRSVRVTPDGYEVSLAPGDHRLVTRRHVFSWS QSEARRSEDGEYHLCLFPDEDTPRCFYAPDMGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12954; Mature: 12822
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMRLVLTVLFLLLAFSATAPAHESHKGFKYESYCCNGDAETGDCQMIPTRSVRVTPDGY CCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECEEEECCCCCCCCEEEECCCCEEECCCCC EVSLAPGDHRLVTRRHVFSWSQSEARRSEDGEYHLCLFPDEDTPRCFYAPDMGY EEEECCCCCEEEEEHECCCCCCHHHCCCCCCCEEEEEECCCCCCEEEECCCCCC >Mature Secondary Structure PMRLVLTVLFLLLAFSATAPAHESHKGFKYESYCCNGDAETGDCQMIPTRSVRVTPDGY CHHHHHHHHHHHHHHCCCCCCCCCCCCCEECEEEECCCCCCCCEEEECCCCEEECCCCC EVSLAPGDHRLVTRRHVFSWSQSEARRSEDGEYHLCLFPDEDTPRCFYAPDMGY EEEECCCCCEEEEEHECCCCCCHHHCCCCCCCEEEEEECCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA