Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is kdgK [H]

Identifier: 159185147

GI number: 159185147

Start: 2270958

End: 2271845

Strand: Direct

Name: kdgK [H]

Synonym: Atu2296

Alternate gene names: 159185147

Gene position: 2270958-2271845 (Clockwise)

Preceding gene: 15889568

Following gene: 159185148

Centisome position: 79.92

GC content: 63.74

Gene sequence:

>888_bases
ATGGTGGAACTGTCGCAGGCCGGCAACGGGCTGCTGCGCAAGGGTTTCGCCGGGGATACGTTCAATGCCGCCTGGTATGC
CCGCGCCTGCCTGCCGCAGGACTGGTCCGTCGATTATTTTACAGCGCTCGGTGATGATCCGCTGTCGGAAGACATGCTGG
CCTTCATCGCGGAAGCCGGCATCGGCACCGAAAAAATCCGCCGTATCAAGGGGGGCACACCCGGCCTCTACCTCATCAAC
CTGAAAGACGGCGAACGCACCTTCAGCTACTGGCGCAACGCCGCCGCCGCAAGACAGCTGGCCGCCGACGCAGATCACCT
GCGCAAGACGGTCGAAAGCGCCGATGTAGTCTATTTCTCCGGCATCACGCTCGCCATTCTCGCCTCCGCCCATGATGTCG
ATACATTTCTGGCCGAACTGCGCCGCGCCCGGGCTGCCGGCAAGCTGGTGGTCTTCGACCCCAATATCCGCCCGCGCCTC
TGGGCCGACAGGGATGTAATGCTGGAGACGATCTCCAATGGTGCCCGCGCCGCAACGCTGGTCATGCCAAGCTTCGATGA
CGAAGCCAGCCATTTCGGCGATGTCTCCGTGGAAGCGACCATCGCCCGCTACCGTTCGCTCGGCGTTGAAAACATCGTCG
TGAAGGACGGCGCCAAGGGCGCAACGCTTGATTTCGGCGGCAGCCGCAGCCACGCCCCGGCGGAAAAAGCCGTGGATGTG
GTGGACACGACGAGCGCCGGCGACAGCTTCAACGGTGCCTTCCTTGCCCGTTACGTCACCGGAAGTTCTCCGGAAGAGGC
GGCCACCTTCGCGGCAAGGGCGGCGGCAACCGTCATCGGCCATCATGGCGCGCTGATCAGCCCCGAGCTGCTTCCGCTGG
TGGGATAA

Upstream 100 bases:

>100_bases
ATCGCCCTTGTCAGCGGCGCGCACTCGTCGTAAGCCGCATGGCTGGAAAAAACGGGAGGATGACGGCGTGGGCGGACGGT
TTTTGTCGATTGGCGAATGC

Downstream 100 bases:

>100_bases
GGCTCGCCACACTGGGCGAACGTGGATTTTCGCATGCAGCCGCCTCGGCTTCCCTCATTCCTGTGCTTGTCACAGGAATC
CAGCCGACGCGCGTCTGCGC

Product: 2-dehydro-3-deoxygluconokinase

Products: NA

Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MVELSQAGNGLLRKGFAGDTFNAAWYARACLPQDWSVDYFTALGDDPLSEDMLAFIAEAGIGTEKIRRIKGGTPGLYLIN
LKDGERTFSYWRNAAAARQLAADADHLRKTVESADVVYFSGITLAILASAHDVDTFLAELRRARAAGKLVVFDPNIRPRL
WADRDVMLETISNGARAATLVMPSFDDEASHFGDVSVEATIARYRSLGVENIVVKDGAKGATLDFGGSRSHAPAEKAVDV
VDTTSAGDSFNGAFLARYVTGSSPEEAATFAARAAATVIGHHGALISPELLPLVG

Sequences:

>Translated_295_residues
MVELSQAGNGLLRKGFAGDTFNAAWYARACLPQDWSVDYFTALGDDPLSEDMLAFIAEAGIGTEKIRRIKGGTPGLYLIN
LKDGERTFSYWRNAAAARQLAADADHLRKTVESADVVYFSGITLAILASAHDVDTFLAELRRARAAGKLVVFDPNIRPRL
WADRDVMLETISNGARAATLVMPSFDDEASHFGDVSVEATIARYRSLGVENIVVKDGAKGATLDFGGSRSHAPAEKAVDV
VDTTSAGDSFNGAFLARYVTGSSPEEAATFAARAAATVIGHHGALISPELLPLVG
>Mature_295_residues
MVELSQAGNGLLRKGFAGDTFNAAWYARACLPQDWSVDYFTALGDDPLSEDMLAFIAEAGIGTEKIRRIKGGTPGLYLIN
LKDGERTFSYWRNAAAARQLAADADHLRKTVESADVVYFSGITLAILASAHDVDTFLAELRRARAAGKLVVFDPNIRPRL
WADRDVMLETISNGARAATLVMPSFDDEASHFGDVSVEATIARYRSLGVENIVVKDGAKGATLDFGGSRSHAPAEKAVDV
VDTTSAGDSFNGAFLARYVTGSSPEEAATFAARAAATVIGHHGALISPELLPLVG

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87082281, Length=306, Percent_Identity=39.2156862745098, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI87081971, Length=207, Percent_Identity=27.0531400966184, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.45 [H]

Molecular weight: Translated: 31423; Mature: 31423

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVELSQAGNGLLRKGFAGDTFNAAWYARACLPQDWSVDYFTALGDDPLSEDMLAFIAEAG
CCCCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHCC
IGTEKIRRIKGGTPGLYLINLKDGERTFSYWRNAAAARQLAADADHLRKTVESADVVYFS
CCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEC
GITLAILASAHDVDTFLAELRRARAAGKLVVFDPNIRPRLWADRDVMLETISNGARAATL
CEEEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEECCHHHHHHHHCCCCEEEEE
VMPSFDDEASHFGDVSVEATIARYRSLGVENIVVKDGAKGATLDFGGSRSHAPAEKAVDV
EECCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCHHHHHHH
VDTTSAGDSFNGAFLARYVTGSSPEEAATFAARAAATVIGHHGALISPELLPLVG
EECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
>Mature Secondary Structure
MVELSQAGNGLLRKGFAGDTFNAAWYARACLPQDWSVDYFTALGDDPLSEDMLAFIAEAG
CCCCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHCC
IGTEKIRRIKGGTPGLYLINLKDGERTFSYWRNAAAARQLAADADHLRKTVESADVVYFS
CCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEC
GITLAILASAHDVDTFLAELRRARAAGKLVVFDPNIRPRLWADRDVMLETISNGARAATL
CEEEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEECCHHHHHHHHCCCCEEEEE
VMPSFDDEASHFGDVSVEATIARYRSLGVENIVVKDGAKGATLDFGGSRSHAPAEKAVDV
EECCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCHHHHHHH
VDTTSAGDSFNGAFLARYVTGSSPEEAATFAARAAATVIGHHGALISPELLPLVG
EECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8157608 [H]