Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is kdgK [H]
Identifier: 159185147
GI number: 159185147
Start: 2270958
End: 2271845
Strand: Direct
Name: kdgK [H]
Synonym: Atu2296
Alternate gene names: 159185147
Gene position: 2270958-2271845 (Clockwise)
Preceding gene: 15889568
Following gene: 159185148
Centisome position: 79.92
GC content: 63.74
Gene sequence:
>888_bases ATGGTGGAACTGTCGCAGGCCGGCAACGGGCTGCTGCGCAAGGGTTTCGCCGGGGATACGTTCAATGCCGCCTGGTATGC CCGCGCCTGCCTGCCGCAGGACTGGTCCGTCGATTATTTTACAGCGCTCGGTGATGATCCGCTGTCGGAAGACATGCTGG CCTTCATCGCGGAAGCCGGCATCGGCACCGAAAAAATCCGCCGTATCAAGGGGGGCACACCCGGCCTCTACCTCATCAAC CTGAAAGACGGCGAACGCACCTTCAGCTACTGGCGCAACGCCGCCGCCGCAAGACAGCTGGCCGCCGACGCAGATCACCT GCGCAAGACGGTCGAAAGCGCCGATGTAGTCTATTTCTCCGGCATCACGCTCGCCATTCTCGCCTCCGCCCATGATGTCG ATACATTTCTGGCCGAACTGCGCCGCGCCCGGGCTGCCGGCAAGCTGGTGGTCTTCGACCCCAATATCCGCCCGCGCCTC TGGGCCGACAGGGATGTAATGCTGGAGACGATCTCCAATGGTGCCCGCGCCGCAACGCTGGTCATGCCAAGCTTCGATGA CGAAGCCAGCCATTTCGGCGATGTCTCCGTGGAAGCGACCATCGCCCGCTACCGTTCGCTCGGCGTTGAAAACATCGTCG TGAAGGACGGCGCCAAGGGCGCAACGCTTGATTTCGGCGGCAGCCGCAGCCACGCCCCGGCGGAAAAAGCCGTGGATGTG GTGGACACGACGAGCGCCGGCGACAGCTTCAACGGTGCCTTCCTTGCCCGTTACGTCACCGGAAGTTCTCCGGAAGAGGC GGCCACCTTCGCGGCAAGGGCGGCGGCAACCGTCATCGGCCATCATGGCGCGCTGATCAGCCCCGAGCTGCTTCCGCTGG TGGGATAA
Upstream 100 bases:
>100_bases ATCGCCCTTGTCAGCGGCGCGCACTCGTCGTAAGCCGCATGGCTGGAAAAAACGGGAGGATGACGGCGTGGGCGGACGGT TTTTGTCGATTGGCGAATGC
Downstream 100 bases:
>100_bases GGCTCGCCACACTGGGCGAACGTGGATTTTCGCATGCAGCCGCCTCGGCTTCCCTCATTCCTGTGCTTGTCACAGGAATC CAGCCGACGCGCGTCTGCGC
Product: 2-dehydro-3-deoxygluconokinase
Products: NA
Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MVELSQAGNGLLRKGFAGDTFNAAWYARACLPQDWSVDYFTALGDDPLSEDMLAFIAEAGIGTEKIRRIKGGTPGLYLIN LKDGERTFSYWRNAAAARQLAADADHLRKTVESADVVYFSGITLAILASAHDVDTFLAELRRARAAGKLVVFDPNIRPRL WADRDVMLETISNGARAATLVMPSFDDEASHFGDVSVEATIARYRSLGVENIVVKDGAKGATLDFGGSRSHAPAEKAVDV VDTTSAGDSFNGAFLARYVTGSSPEEAATFAARAAATVIGHHGALISPELLPLVG
Sequences:
>Translated_295_residues MVELSQAGNGLLRKGFAGDTFNAAWYARACLPQDWSVDYFTALGDDPLSEDMLAFIAEAGIGTEKIRRIKGGTPGLYLIN LKDGERTFSYWRNAAAARQLAADADHLRKTVESADVVYFSGITLAILASAHDVDTFLAELRRARAAGKLVVFDPNIRPRL WADRDVMLETISNGARAATLVMPSFDDEASHFGDVSVEATIARYRSLGVENIVVKDGAKGATLDFGGSRSHAPAEKAVDV VDTTSAGDSFNGAFLARYVTGSSPEEAATFAARAAATVIGHHGALISPELLPLVG >Mature_295_residues MVELSQAGNGLLRKGFAGDTFNAAWYARACLPQDWSVDYFTALGDDPLSEDMLAFIAEAGIGTEKIRRIKGGTPGLYLIN LKDGERTFSYWRNAAAARQLAADADHLRKTVESADVVYFSGITLAILASAHDVDTFLAELRRARAAGKLVVFDPNIRPRL WADRDVMLETISNGARAATLVMPSFDDEASHFGDVSVEATIARYRSLGVENIVVKDGAKGATLDFGGSRSHAPAEKAVDV VDTTSAGDSFNGAFLARYVTGSSPEEAATFAARAAATVIGHHGALISPELLPLVG
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082281, Length=306, Percent_Identity=39.2156862745098, Blast_Score=179, Evalue=2e-46, Organism=Escherichia coli, GI87081971, Length=207, Percent_Identity=27.0531400966184, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.45 [H]
Molecular weight: Translated: 31423; Mature: 31423
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVELSQAGNGLLRKGFAGDTFNAAWYARACLPQDWSVDYFTALGDDPLSEDMLAFIAEAG CCCCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHCC IGTEKIRRIKGGTPGLYLINLKDGERTFSYWRNAAAARQLAADADHLRKTVESADVVYFS CCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEC GITLAILASAHDVDTFLAELRRARAAGKLVVFDPNIRPRLWADRDVMLETISNGARAATL CEEEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEECCHHHHHHHHCCCCEEEEE VMPSFDDEASHFGDVSVEATIARYRSLGVENIVVKDGAKGATLDFGGSRSHAPAEKAVDV EECCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCHHHHHHH VDTTSAGDSFNGAFLARYVTGSSPEEAATFAARAAATVIGHHGALISPELLPLVG EECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC >Mature Secondary Structure MVELSQAGNGLLRKGFAGDTFNAAWYARACLPQDWSVDYFTALGDDPLSEDMLAFIAEAG CCCCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHCC IGTEKIRRIKGGTPGLYLINLKDGERTFSYWRNAAAARQLAADADHLRKTVESADVVYFS CCHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEC GITLAILASAHDVDTFLAELRRARAAGKLVVFDPNIRPRLWADRDVMLETISNGARAATL CEEEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEECCHHHHHHHHCCCCEEEEE VMPSFDDEASHFGDVSVEATIARYRSLGVENIVVKDGAKGATLDFGGSRSHAPAEKAVDV EECCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCHHHHHHH VDTTSAGDSFNGAFLARYVTGSSPEEAATFAARAAATVIGHHGALISPELLPLVG EECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8157608 [H]