Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159185087
Identifier: 159185087
GI number: 159185087
Start: 2147577
End: 2148056
Strand: Direct
Name: 159185087
Synonym: Atu2174
Alternate gene names: NA
Gene position: 2147577-2148056 (Clockwise)
Preceding gene: 159185086
Following gene: 159185088
Centisome position: 75.58
GC content: 61.88
Gene sequence:
>480_bases ATGCTGGAACTGATTTGGCGCGGCATTGCCATGGGCATTGGCGGCACCGTGTTTATGGATATATGGGCAATCATTCTGCA CCGGTTTTTCGGCCAGTCCGCGCCGAACTGGGCGCCGGTCGGCCGCTGGTTCTGGCATGTGCCGAAGGGTCGGATATTTC ACGACAGCATCGCCACGGCGACACCCTATGAGCACGAACTGGCGCTCGGCTGGATTTCGCATTACGCCGTCGGCATCCTC TACGGCATCATTCTCGCGCTGGTCGTCCCGGCCGCATGGTTTGCCAATCCGTCCTTCATCGAGCCGTGGATCGTCGGCAT CGTAACGGTCGGCGCGGGCTGGTTCCTGCTGCAGCCGGGGCTGGGCATCGGCTGGGCGGCATCGAAGACGCCGAACCCCA CAAAGGTCCGTATCCTGAACCTCGTGGCCCATACCATCTTCGCGCTGGGCATGTATGCCGTGGCGCTCTTGATGAGCTGA
Upstream 100 bases:
>100_bases GCAATCCGGCCATTTTTCTTCGCCACCCCGGCAATAGACCATTCCCGCCATCGACCCAATCCGCTAGAGCTTGATCGATC ATGATCATGCGGAGGGATCT
Downstream 100 bases:
>100_bases ATGAAAAAGGGGGCTGAAAGCCCCCTTTTTCATCTGATCTCTCAGATATTCGCCGAGAAAGTATCGCAATCCTCGACACG ACCATTCTGGAAGCCGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MLELIWRGIAMGIGGTVFMDIWAIILHRFFGQSAPNWAPVGRWFWHVPKGRIFHDSIATATPYEHELALGWISHYAVGIL YGIILALVVPAAWFANPSFIEPWIVGIVTVGAGWFLLQPGLGIGWAASKTPNPTKVRILNLVAHTIFALGMYAVALLMS
Sequences:
>Translated_159_residues MLELIWRGIAMGIGGTVFMDIWAIILHRFFGQSAPNWAPVGRWFWHVPKGRIFHDSIATATPYEHELALGWISHYAVGIL YGIILALVVPAAWFANPSFIEPWIVGIVTVGAGWFLLQPGLGIGWAASKTPNPTKVRILNLVAHTIFALGMYAVALLMS >Mature_159_residues MLELIWRGIAMGIGGTVFMDIWAIILHRFFGQSAPNWAPVGRWFWHVPKGRIFHDSIATATPYEHELALGWISHYAVGIL YGIILALVVPAAWFANPSFIEPWIVGIVTVGAGWFLLQPGLGIGWAASKTPNPTKVRILNLVAHTIFALGMYAVALLMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17520; Mature: 17520
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELIWRGIAMGIGGTVFMDIWAIILHRFFGQSAPNWAPVGRWFWHVPKGRIFHDSIATA CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEECCCCCEECCCCCCC TPYEHELALGWISHYAVGILYGIILALVVPAAWFANPSFIEPWIVGIVTVGAGWFLLQPG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCC LGIGWAASKTPNPTKVRILNLVAHTIFALGMYAVALLMS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLELIWRGIAMGIGGTVFMDIWAIILHRFFGQSAPNWAPVGRWFWHVPKGRIFHDSIATA CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEECCCCCEECCCCCCC TPYEHELALGWISHYAVGILYGIILALVVPAAWFANPSFIEPWIVGIVTVGAGWFLLQPG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEECCC LGIGWAASKTPNPTKVRILNLVAHTIFALGMYAVALLMS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA