Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is yuaR [H]

Identifier: 159185085

GI number: 159185085

Start: 2141878

End: 2143392

Strand: Direct

Name: yuaR [H]

Synonym: Atu2171

Alternate gene names: 159185085

Gene position: 2141878-2143392 (Clockwise)

Preceding gene: 159185084

Following gene: 159185086

Centisome position: 75.38

GC content: 51.16

Gene sequence:

>1515_bases
ATGATATCAATAAATTTATATATAAAAAACATCATTGTAATTACTACAGATTGCATCGCACTTTCCTTGATAATATTATT
GTCACCACCTGCGGAAGCAGCTTCATCATCATTCAATAAATCACGTATAAACTGGCTGCCTTGCACCAAGCCTCAATTTA
AATTTTGGTTCGAAGGCAGACTTCCGCCGCCTATGCTTGAATGCGCAAGAATGGCAGCACCGTTAATATATTCCAATCGG
CGCGAGGCGGGTTCATCTCCACCCAGACGGCGAGTCTCGCTTGCGATCACAAGATTGCCTGCAACGGGCCGAAAACAAGG
AAGCCTCGTCATTATTACGGGGGGTCCAGGGATGTCAGGCATTATTCAACTGCTCGACCCGAGAACAGACGCGGTCAAGC
GGTTGAGAGAGTCATACGATATTATCCGCTACGATCCTCGTGGGGTCGGACAATCGACTCCAAAAATTTCATGTGCTTCA
TACGTAAGCCGCGAAAACGCGCTGGTGGTTGACGACGCAGGCGATCGGGCGATGGCCGCCTATGTTGAAGCCTGCATAAA
AACAACCGGGCGAACAGTTCTTGAACACATCGGTACGAACGAAGCGGTCGATGATCTCGATCTTCTGCGGCGGCAACTCG
GGGAAGAGTTCCTTACGGCGATCGCTTACTCCTATGGGACCCAAGTCGCCGCTCTCTACGCGGAACGTTATCCTGGCTCA
GTTCGGGCAATTGTATTGGACGGCGTCGTAGACCTCGCAGAGGACTGGCAAACGATGCGATTGAACCAGCAGCGTGGTTA
TCAAAATACATTCGAACGCTTTGTTTCCTTTTGCAATCTGGAAAAATCGTGTCCCTTCAAGGACAGCGTCGAAAAAACAA
CGGCCGATTTTCATCGACTGCTGCAAGCCGTCGACAACAGGCCGTTTTCAACAACCGGCGGCTACAGAGTGACGACGAGA
GAGGTTCTGGCCGTCACGACCTACGGCCTGTTGTGGAAAACGCACTGGCCGACACTCGGCGAAGCCTTTGAAGCGCTATC
GAACGGCAAAGCGGACAAGATCAAGGAATTGGCCGAAACAATACTGAAAGAAGACGAGATTGATGCTTCCGTGGCGATCA
CCTGTGCAGATTCTGCATCTCCGACGAAGGATCGGCAGGAGCGAATCGCCCGCGCAAAGGCAGTCAAGGAAGCAGCTCCC
TATGCCAACTATAACCCTGACGTCATAGAAATCAATGTCTGCGATATGTGGCCCTTCGCTGGCAAATTAAGCGCCCGCAT
TCCCACTCTGCCCGACAACCTGCCCGCTTTGCTGTTTGTTGCTCAGAAATATGATCCGACCACGCCCCATATCAACGCGC
GGCGTATGGCAGACTATTTTCGTAGCCCACTCGTCAGCAAAAACGCGGATGGTCACACTTTGGTACTTACGGGGTCCGAC
AAGTGCGTCGATCAGGAAGTTACGAGTTATCTGTTGAAGCCAACAGAACCCAGACAAGACAAGGCTTGCGATTGA

Upstream 100 bases:

>100_bases
ACGTATATTTATATAATTTTATTATTTAATCGAAAATATTAGTAAAATTATAAAGTAAATATCTCTATCATCATAGATTC
CTAAATTATAGGAAAGCATT

Downstream 100 bases:

>100_bases
GGCATCCCGTGAGGAACTCTTTTCGAGGCGCAGACGCGCCATGGCCGGATGACCACCCGACGGCCCGCTTTTAGCGGGCC
GTTTTCATTTCGCGCTTCAC

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MISINLYIKNIIVITTDCIALSLIILLSPPAEAASSSFNKSRINWLPCTKPQFKFWFEGRLPPPMLECARMAAPLIYSNR
REAGSSPPRRRVSLAITRLPATGRKQGSLVIITGGPGMSGIIQLLDPRTDAVKRLRESYDIIRYDPRGVGQSTPKISCAS
YVSRENALVVDDAGDRAMAAYVEACIKTTGRTVLEHIGTNEAVDDLDLLRRQLGEEFLTAIAYSYGTQVAALYAERYPGS
VRAIVLDGVVDLAEDWQTMRLNQQRGYQNTFERFVSFCNLEKSCPFKDSVEKTTADFHRLLQAVDNRPFSTTGGYRVTTR
EVLAVTTYGLLWKTHWPTLGEAFEALSNGKADKIKELAETILKEDEIDASVAITCADSASPTKDRQERIARAKAVKEAAP
YANYNPDVIEINVCDMWPFAGKLSARIPTLPDNLPALLFVAQKYDPTTPHINARRMADYFRSPLVSKNADGHTLVLTGSD
KCVDQEVTSYLLKPTEPRQDKACD

Sequences:

>Translated_504_residues
MISINLYIKNIIVITTDCIALSLIILLSPPAEAASSSFNKSRINWLPCTKPQFKFWFEGRLPPPMLECARMAAPLIYSNR
REAGSSPPRRRVSLAITRLPATGRKQGSLVIITGGPGMSGIIQLLDPRTDAVKRLRESYDIIRYDPRGVGQSTPKISCAS
YVSRENALVVDDAGDRAMAAYVEACIKTTGRTVLEHIGTNEAVDDLDLLRRQLGEEFLTAIAYSYGTQVAALYAERYPGS
VRAIVLDGVVDLAEDWQTMRLNQQRGYQNTFERFVSFCNLEKSCPFKDSVEKTTADFHRLLQAVDNRPFSTTGGYRVTTR
EVLAVTTYGLLWKTHWPTLGEAFEALSNGKADKIKELAETILKEDEIDASVAITCADSASPTKDRQERIARAKAVKEAAP
YANYNPDVIEINVCDMWPFAGKLSARIPTLPDNLPALLFVAQKYDPTTPHINARRMADYFRSPLVSKNADGHTLVLTGSD
KCVDQEVTSYLLKPTEPRQDKACD
>Mature_504_residues
MISINLYIKNIIVITTDCIALSLIILLSPPAEAASSSFNKSRINWLPCTKPQFKFWFEGRLPPPMLECARMAAPLIYSNR
REAGSSPPRRRVSLAITRLPATGRKQGSLVIITGGPGMSGIIQLLDPRTDAVKRLRESYDIIRYDPRGVGQSTPKISCAS
YVSRENALVVDDAGDRAMAAYVEACIKTTGRTVLEHIGTNEAVDDLDLLRRQLGEEFLTAIAYSYGTQVAALYAERYPGS
VRAIVLDGVVDLAEDWQTMRLNQQRGYQNTFERFVSFCNLEKSCPFKDSVEKTTADFHRLLQAVDNRPFSTTGGYRVTTR
EVLAVTTYGLLWKTHWPTLGEAFEALSNGKADKIKELAETILKEDEIDASVAITCADSASPTKDRQERIARAKAVKEAAP
YANYNPDVIEINVCDMWPFAGKLSARIPTLPDNLPALLFVAQKYDPTTPHINARRMADYFRSPLVSKNADGHTLVLTGSD
KCVDQEVTSYLLKPTEPRQDKACD

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR013595 [H]

Pfam domain/function: PF00561 Abhydrolase_1; PF08386 Abhydrolase_4 [H]

EC number: NA

Molecular weight: Translated: 55939; Mature: 55939

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISINLYIKNIIVITTDCIALSLIILLSPPAEAASSSFNKSRINWLPCTKPQFKFWFEGR
CEEEEEEEEEEEEEEHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCC
LPPPMLECARMAAPLIYSNRREAGSSPPRRRVSLAITRLPATGRKQGSLVIITGGPGMSG
CCCHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCHHH
IIQLLDPRTDAVKRLRESYDIIRYDPRGVGQSTPKISCASYVSRENALVVDDAGDRAMAA
HHHHHCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHCCCCCEEEECCCCHHHHH
YVEACIKTTGRTVLEHIGTNEAVDDLDLLRRQLGEEFLTAIAYSYGTQVAALYAERYPGS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
VRAIVLDGVVDLAEDWQTMRLNQQRGYQNTFERFVSFCNLEKSCPFKDSVEKTTADFHRL
EEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
LQAVDNRPFSTTGGYRVTTREVLAVTTYGLLWKTHWPTLGEAFEALSNGKADKIKELAET
HHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCHHHHHHHHHH
ILKEDEIDASVAITCADSASPTKDRQERIARAKAVKEAAPYANYNPDVIEINVCDMWPFA
HHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCC
GKLSARIPTLPDNLPALLFVAQKYDPTTPHINARRMADYFRSPLVSKNADGHTLVLTGSD
CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCC
KCVDQEVTSYLLKPTEPRQDKACD
HHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MISINLYIKNIIVITTDCIALSLIILLSPPAEAASSSFNKSRINWLPCTKPQFKFWFEGR
CEEEEEEEEEEEEEEHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCC
LPPPMLECARMAAPLIYSNRREAGSSPPRRRVSLAITRLPATGRKQGSLVIITGGPGMSG
CCCHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCHHH
IIQLLDPRTDAVKRLRESYDIIRYDPRGVGQSTPKISCASYVSRENALVVDDAGDRAMAA
HHHHHCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHCCCCCEEEECCCCHHHHH
YVEACIKTTGRTVLEHIGTNEAVDDLDLLRRQLGEEFLTAIAYSYGTQVAALYAERYPGS
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
VRAIVLDGVVDLAEDWQTMRLNQQRGYQNTFERFVSFCNLEKSCPFKDSVEKTTADFHRL
EEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
LQAVDNRPFSTTGGYRVTTREVLAVTTYGLLWKTHWPTLGEAFEALSNGKADKIKELAET
HHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCHHHHHHHHHH
ILKEDEIDASVAITCADSASPTKDRQERIARAKAVKEAAPYANYNPDVIEINVCDMWPFA
HHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCC
GKLSARIPTLPDNLPALLFVAQKYDPTTPHINARRMADYFRSPLVSKNADGHTLVLTGSD
CCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCC
KCVDQEVTSYLLKPTEPRQDKACD
HHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8288530 [H]