Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185083
Identifier: 159185083
GI number: 159185083
Start: 2133420
End: 2134382
Strand: Reverse
Name: 159185083
Synonym: Atu2166
Alternate gene names: NA
Gene position: 2134382-2133420 (Counterclockwise)
Preceding gene: 15889446
Following gene: 159185082
Centisome position: 75.11
GC content: 61.27
Gene sequence:
>963_bases ATGCAACAGGTTTCGGCAGGCAAATGGCGGCGGGGAGGATGGGCTGTGCCCGTCTCCGTGTTGCTGCATCTTGTCGTCGT TGCACTCTTCTTTTTCGAATTGCCGGAACGGATAGCCGAGCCGCAGGAGCCCGAAAGCGTCAACGTTGAACTCGTGCCGC CGCCCGAGGAGAAAAAAGAAGAAGCTGCCCCGCCGCCGGCTGCGGCGGCCAAGGCGGAGAAACCGCAACCTCCGCCGCCA CCACCGCCCGCACCGCCGAAGGAAGATGTAAAACCGACGCCGCAACCGCAGGCGACGCTGCCGTCCATCTCCATGCGGCC GGAGGAAATGCAGGCCGACAAAGAGGACAAGCCGGGCAAGGCGGAAGAAGCTGAAAAGAGCCAAGCGTCCGAGGAGCCTG CAAGCCAGCCTGAAAAGGCCGCTGAGGAGAAGCCTGCGCCACCCGCCGCCAACAGCGATCTTCAGGCTTCCGCCGAGCAG GGGGAGATCGCGGTTTCACCCGTGAAGGAAGAAACACCGCCGGAGCAGCCACCGGTGCCGCAGGCCAAGCCGGCAGAGGA AAAGCCTGCGGAGGTTGCGGAGAAGAAACCCGCGAAGCTTCCTGCGGTGAAGAGTTTGCTATCATCGGCGTTGCTAACAC CGGCGCAGCGACGACAGATTTTTGGCGATCTACCGCCCCGCCGTCGGATCGTGCAGCTTTGCCAGACGGAGGCGTTGGCG CAAATAAGAGAGGTTTATCCAGCTACCCGAGGCATGTACGGCTTTTCCGACACTGGTGGACGCATATCCGGCAATGTCCT TGACGCTACTGGGGGCGCATTCAACGTCGGCGACGTCTGGCACGATGTCACGTTTCAATGTGATGTGGATGTGGACAATT ACGCGGTGACGGCCTTCAGATTTAAGATAGGGGATGTCATTACGCCGGCCGAAGCAACGAAGCGCGGTTTCACGGGGCGA TAG
Upstream 100 bases:
>100_bases TTTTTGTTTCCCGCACTGGCGAACTCTGCGACAAGCCTTATGTGTGAAAACAGGCATTCCGCTTTACTGGAAATGCTCAG CTTCGATTTGGTTCGACAGG
Downstream 100 bases:
>100_bases CGGATCATTGGTCTGCGCGCGCCTCTACCTCATTCCTGTTACAAGCACAGGGATGAGGGGAGGCTACGCTCAAACCCGCT CCGTATCCCCCACCAACACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MQQVSAGKWRRGGWAVPVSVLLHLVVVALFFFELPERIAEPQEPESVNVELVPPPEEKKEEAAPPPAAAAKAEKPQPPPP PPPAPPKEDVKPTPQPQATLPSISMRPEEMQADKEDKPGKAEEAEKSQASEEPASQPEKAAEEKPAPPAANSDLQASAEQ GEIAVSPVKEETPPEQPPVPQAKPAEEKPAEVAEKKPAKLPAVKSLLSSALLTPAQRRQIFGDLPPRRRIVQLCQTEALA QIREVYPATRGMYGFSDTGGRISGNVLDATGGAFNVGDVWHDVTFQCDVDVDNYAVTAFRFKIGDVITPAEATKRGFTGR
Sequences:
>Translated_320_residues MQQVSAGKWRRGGWAVPVSVLLHLVVVALFFFELPERIAEPQEPESVNVELVPPPEEKKEEAAPPPAAAAKAEKPQPPPP PPPAPPKEDVKPTPQPQATLPSISMRPEEMQADKEDKPGKAEEAEKSQASEEPASQPEKAAEEKPAPPAANSDLQASAEQ GEIAVSPVKEETPPEQPPVPQAKPAEEKPAEVAEKKPAKLPAVKSLLSSALLTPAQRRQIFGDLPPRRRIVQLCQTEALA QIREVYPATRGMYGFSDTGGRISGNVLDATGGAFNVGDVWHDVTFQCDVDVDNYAVTAFRFKIGDVITPAEATKRGFTGR >Mature_320_residues MQQVSAGKWRRGGWAVPVSVLLHLVVVALFFFELPERIAEPQEPESVNVELVPPPEEKKEEAAPPPAAAAKAEKPQPPPP PPPAPPKEDVKPTPQPQATLPSISMRPEEMQADKEDKPGKAEEAEKSQASEEPASQPEKAAEEKPAPPAANSDLQASAEQ GEIAVSPVKEETPPEQPPVPQAKPAEEKPAEVAEKKPAKLPAVKSLLSSALLTPAQRRQIFGDLPPRRRIVQLCQTEALA QIREVYPATRGMYGFSDTGGRISGNVLDATGGAFNVGDVWHDVTFQCDVDVDNYAVTAFRFKIGDVITPAEATKRGFTGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34447; Mature: 34447
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQVSAGKWRRGGWAVPVSVLLHLVVVALFFFELPERIAEPQEPESVNVELVPPPEEKKE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHH EAAPPPAAAAKAEKPQPPPPPPPAPPKEDVKPTPQPQATLPSISMRPEEMQADKEDKPGK HCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC AEEAEKSQASEEPASQPEKAAEEKPAPPAANSDLQASAEQGEIAVSPVKEETPPEQPPVP HHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHCCCCEEECCCCCCCCCCCCCCC QAKPAEEKPAEVAEKKPAKLPAVKSLLSSALLTPAQRRQIFGDLPPRRRIVQLCQTEALA CCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHH QIREVYPATRGMYGFSDTGGRISGNVLDATGGAFNVGDVWHDVTFQCDVDVDNYAVTAFR HHHHHHHHHCCCCCCCCCCCEEECCEEECCCCCCCCCHHHHCCEEEEECCCCCEEEEEEE FKIGDVITPAEATKRGFTGR EECCCEECCHHHHHCCCCCC >Mature Secondary Structure MQQVSAGKWRRGGWAVPVSVLLHLVVVALFFFELPERIAEPQEPESVNVELVPPPEEKKE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHH EAAPPPAAAAKAEKPQPPPPPPPAPPKEDVKPTPQPQATLPSISMRPEEMQADKEDKPGK HCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC AEEAEKSQASEEPASQPEKAAEEKPAPPAANSDLQASAEQGEIAVSPVKEETPPEQPPVP HHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHCCCCEEECCCCCCCCCCCCCCC QAKPAEEKPAEVAEKKPAKLPAVKSLLSSALLTPAQRRQIFGDLPPRRRIVQLCQTEALA CCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHH QIREVYPATRGMYGFSDTGGRISGNVLDATGGAFNVGDVWHDVTFQCDVDVDNYAVTAFR HHHHHHHHHCCCCCCCCCCCEEECCEEECCCCCCCCCHHHHCCEEEEECCCCCEEEEEEE FKIGDVITPAEATKRGFTGR EECCCEECCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA